Guide Gene

Gene ID
Mapoly0173s0007
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005515] protein binding; [PTHR10855:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; [KOG1498] 26S proteasome regulatory complex, subunit RPN5/PSMD12; [K03035] 26S proteasome regulatory subunit N5; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0173s0007 [GO:0005515] protein binding; [PTHR10855:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; [KOG1498] 26S proteasome regulatory complex, subunit RPN5/PSMD12; [K03035] 26S proteasome regulatory subunit N5; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 0.00 1.0000
1 Mapoly0156s0015 [GO:0005524] ATP binding; [KOG0361] Chaperonin complex component, TCP-1 eta subunit (CCT7); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [PTHR11353:SF22] CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ETA SUBUNIT, TCPH; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding2.650.8547
2 Mapoly0009s0112 [GO:0005524] ATP binding; [K03064] 26S proteasome regulatory subunit T4; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0651] 26S proteasome regulatory complex, ATPase RPT4; [PF00004] ATPase family associated with various cellular activities (AAA)3.460.8283
3 Mapoly0099s0028 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0360] Chaperonin complex component, TCP-1 alpha subunit (CCT1)3.460.8461
4 Mapoly0013s0040 [GO:0005524] ATP binding; [KOG0359] Chaperonin complex component, TCP-1 zeta subunit (CCT6); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family4.580.8434
5 Mapoly0037s0016 [KOG2096] WD40 repeat protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat5.480.8255
6 Mapoly0051s0088 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0357] Chaperonin complex component, TCP-1 epsilon subunit (CCT5)8.660.8261
7 Mapoly0132s0010 [GO:0005524] ATP binding; [K01876] aspartyl-tRNA synthetase [EC:6.1.1.12]; [GO:0004815] aspartate-tRNA ligase activity; [GO:0005737] cytoplasm; [GO:0006422] aspartyl-tRNA aminoacylation; [6.1.1.12] Aspartate--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [KOG0556] Aspartyl-tRNA synthetase; [PTHR22594:SF10] SUBFAMILY NOT NAMED; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)11.830.8129
8 Mapoly0138s0042 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02725] 20S proteasome subunit alpha 6 [EC:3.4.25.1]; [KOG0863] 20S proteasome, regulatory subunit alpha type PSMA1/PRE5; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PTHR11599:SF12] PROTEASOME SUBUNIT ALPHA TYPE 1; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA12.490.7641
9 Mapoly0007s0138 [PF08492] SRP72 RNA-binding domain; [PF13371] Tetratricopeptide repeat; [GO:0048500] signal recognition particle; [KOG2376] Signal recognition particle, subunit Srp72; [GO:0008312] 7S RNA binding; [PTHR14094:SF9] SIGNAL RECOGNITION PARTICLE 72; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [K03108] signal recognition particle subunit SRP72; [PTHR14094] SIGNAL RECOGNITION PARTICLE 7213.270.8060
10 Mapoly0085s0078 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23073:SF7] 26S PROTEASE REGULATORY SUBUNIT 6A; [K03065] 26S proteasome regulatory subunit T5; [KOG0652] 26S proteasome regulatory complex, ATPase RPT514.140.7499
11 Mapoly0197s0012 [GO:0005515] protein binding; [K03030] 26S proteasome regulatory subunit N11; [PF13012] Maintenance of mitochondrial structure and function; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1555] 26S proteasome regulatory complex, subunit RPN11; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [PTHR10410:SF5] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1414.700.7222
12 Mapoly0009s0121 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [KOG0364] Chaperonin complex component, TCP-1 gamma subunit (CCT3); [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding15.300.7839
13 Mapoly0011s0012 [GO:0016020] membrane; [KOG2620] Prohibitins and stomatins of the PID superfamily; [PTHR10264] BAND 7 PROTEIN-RELATED; [PTHR10264:SF27] UNCHARACTERIZED; [PF01145] SPFH domain / Band 7 family17.660.7640
14 Mapoly0168s0006 [KOG4836] Uncharacterized conserved protein; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [PF08294] TIM21; [PTHR13032] FAMILY NOT NAMED; [GO:0030150] protein import into mitochondrial matrix18.730.7208
15 Mapoly0084s0068 [PTHR10971] MRNA EXPORT FACTOR AND BUB3; [GO:0005515] protein binding; [K14298] mRNA export factor; [PTHR10971:SF11] MRNA EXPORT FACTOR; [PF00400] WD domain, G-beta repeat; [KOG0647] mRNA export protein (contains WD40 repeats)18.970.7704
16 Mapoly0015s0123 [GO:0003723] RNA binding; [PF07541] Eukaryotic translation initiation factor 2 alpha subunit; [GO:0005850] eukaryotic translation initiation factor 2 complex; [PTHR10602] EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1; [K03237] translation initiation factor eIF-2 alpha subunit; [GO:0003743] translation initiation factor activity; [PTHR10602:SF0] EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1; [PF00575] S1 RNA binding domain; [KOG2916] Translation initiation factor 2, alpha subunit (eIF-2alpha)23.240.7526
17 Mapoly0108s0066 [GO:0005524] ATP binding; [PF08544] GHMP kinases C terminal; [PF00288] GHMP kinases N terminal domain; [KOG4519] Phosphomevalonate kinase; [PTHR31814] FAMILY NOT NAMED; [2.7.4.2] Phosphomevalonate kinase.; [K00938] phosphomevalonate kinase [EC:2.7.4.2]23.240.6591
18 Mapoly0010s0007 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit23.830.6846
19 Mapoly0040s0040 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3083] Prohibitin; [PF01145] SPFH domain / Band 7 family24.270.7516
20 Mapoly0130s0037 [GO:0016020] membrane; [GO:0006486] protein glycosylation; [KOG2292] Oligosaccharyltransferase, STT3 subunit; [2.4.1.119] Transferred entry: 2.4.99.18.; [PTHR13872] 60S RIBOSOMAL PROTEIN L35; [K07151] dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119]; [PTHR13872:SF1] OLIGOSACCHARYL TRANSFERASE; [PF02516] Oligosaccharyl transferase STT3 subunit; [GO:0004576] oligosaccharyl transferase activity24.370.7275
21 Mapoly0031s0031 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation24.680.7493
22 Mapoly0062s0069 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family24.980.7598
23 Mapoly0170s0030 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0726] 26S proteasome regulatory complex, ATPase RPT2; [PTHR23073:SF9] 26S PROTEASE REGULATORY SUBUNIT 4; [PF00004] ATPase family associated with various cellular activities (AAA); [K03062] 26S proteasome regulatory subunit T225.690.7302
24 Mapoly0045s0011 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PF01588] Putative tRNA binding domain; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0000049] tRNA binding; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG1247] Methionyl-tRNA synthetase28.340.7669
25 Mapoly0002s0206 [PF10213] Mitochondrial ribosomal subunit protein; [PTHR13490] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S2830.580.7024
26 Mapoly0010s0125 [PTHR21256] HISTIDINOL DEHYDROGENASE (HDH); [PF01502] Phosphoribosyl-AMP cyclohydrolase; [GO:0004635] phosphoribosyl-AMP cyclohydrolase activity; [3.6.1.31] Phosphoribosyl-ATP diphosphatase.; [GO:0000105] histidine biosynthetic process; [K11755] phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19]; [PF01503] Phosphoribosyl-ATP pyrophosphohydrolase; [KOG4311] Histidinol dehydrogenase; [3.5.4.19] Phosphoribosyl-AMP cyclohydrolase.31.890.6554
27 Mapoly0031s0139 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0729] 26S proteasome regulatory complex, ATPase RPT1; [PF00004] ATPase family associated with various cellular activities (AAA); [K03061] 26S proteasome regulatory subunit T1; [PTHR23073:SF13] 26S PROTEASE REGULATORY SUBUNIT 733.910.7156
28 Mapoly0141s0030 [PTHR23139] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [KOG0130] RNA-binding protein RBM8/Tsunagi (RRM superfamily); [K12876] RNA-binding protein 8A; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)34.640.6643
29 Mapoly0151s0043 [PTHR10540:SF8] COP9 SIGNALOSOME COMPLEX SUBUNIT 6; [GO:0005515] protein binding; [K12179] COP9 signalosome complex subunit 6; [PF13012] Maintenance of mitochondrial structure and function; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [PTHR10540] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED; [KOG3050] COP9 signalosome, subunit CSN635.210.6313
30 Mapoly0098s0036 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation; [PF03719] Ribosomal protein S5, C-terminal domain36.120.7604
31 Mapoly0001s0445 [GO:0005840] ribosome; [KOG1711] Mitochondrial/chloroplast ribosomal protein L22; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR13501:SF1] SUBFAMILY NOT NAMED; [PTHR13501] CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED; [PF00237] Ribosomal protein L22p/L17e; [GO:0006412] translation36.510.7194
32 Mapoly0006s0092 [PTHR24012] FAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)37.820.7492
33 Mapoly0065s0074 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [K01868] threonyl-tRNA synthetase [EC:6.1.1.3]; [PTHR11451] TRNA SYNTHETASE-RELATED; [6.1.1.3] Threonine--tRNA ligase.; [PF03129] Anticodon binding domain; [KOG1637] Threonyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [PF02824] TGS domain; [GO:0004812] aminoacyl-tRNA ligase activity38.680.7531
34 Mapoly0007s0196 [KOG4655] U3 small nucleolar ribonucleoprotein (snoRNP) component; [GO:0003723] RNA binding; [PTHR11831:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K14560] U3 small nucleolar ribonucleoprotein protein IMP3; [PF01479] S4 domain40.800.7211
35 Mapoly0090s0010 [K04567] lysyl-tRNA synthetase, class II [EC:6.1.1.6]; [GO:0005524] ATP binding; [PTHR22594:SF4] LYSYL-TRNA SYNTHETASE; [6.1.1.6] Lysine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [KOG1885] Lysyl-tRNA synthetase (class II); [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)41.260.7491
36 Mapoly0004s0269 [GO:0048500] signal recognition particle; [K03105] signal recognition particle subunit SRP19; [KOG3198] Signal recognition particle, subunit Srp19; [PTHR17453] SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN; [GO:0008312] 7S RNA binding; [PF01922] SRP19 protein; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR17453:SF0] SUBFAMILY NOT NAMED41.470.6719
37 Mapoly0023s0025 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF14497] Glutathione S-transferase, C-terminal domain; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF03950] tRNA synthetases class I (E and Q), anti-codon binding domain; [KOG1147] Glutamyl-tRNA synthetase; [6.1.1.17] Glutamate--tRNA ligase.; [PTHR10119:SF15] GLUTAMINYL-TRNA SYNTHETASE; [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [GO:0006418] tRNA aminoacylation for protein translation; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17]; [GO:0004812] aminoacyl-tRNA ligase activity41.670.7620
38 Mapoly0035s0098 -44.790.7248
39 Mapoly0002s0143 [PTHR24015] FAMILY NOT NAMED45.460.7030
40 Mapoly0070s0050 [GO:0004843] ubiquitin-specific protease activity; [PTHR10589] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; [K05610] ubiquitin carboxyl-terminal hydrolase L5 [EC:3.4.19.12]; [GO:0006511] ubiquitin-dependent protein catabolic process; [KOG2778] Ubiquitin C-terminal hydrolase; [GO:0005622] intracellular; [3.4.19.12] Ubiquitinyl hydrolase 1.; [PTHR10589:SF16] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE ISOZYME L5; [PF01088] Ubiquitin carboxyl-terminal hydrolase, family 145.610.7293
41 Mapoly0006s0112 [K09613] COP9 signalosome complex subunit 5 [EC:3.4.-.-]; [GO:0005515] protein binding; [PTHR10410:SF6] COP9 SIGNALOSOME COMPLEX SUBUNIT 5; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [3.4.-.-] Acting on peptide bonds (peptide hydrolases).; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [KOG1554] COP9 signalosome, subunit CSN546.180.7423
42 Mapoly0028s0042 [GO:0005515] protein binding; [PF13414] TPR repeat; [KOG4412] 26S proteasome regulatory complex, subunit PSMD10; [PTHR22904:SF145] PROTEIN DIA2; [PF00515] Tetratricopeptide repeat; [PF12796] Ankyrin repeats (3 copies); [PTHR22904] TPR REPEAT CONTAINING PROTEIN46.510.6611
43 Mapoly0005s0216 [K12177] COP9 signalosome complex subunit 3; [GO:0005515] protein binding; [KOG2582] COP9 signalosome, subunit CSN3; [PTHR10758] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3; [PF01399] PCI domain; [PTHR10758:SF1] COP9 SIGNALOSOME COMPLEX SUBUNIT 347.560.6990
44 Mapoly0001s0399 [PF13243] Prenyltransferase-like; [5.4.99.8] Cycloartenol synthase.; [K01853] cycloartenol synthase [EC:5.4.99.8]; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [KOG0497] Oxidosqualene-lanosterol cyclase and related proteins; [PTHR11764] FAMILY NOT NAMED47.830.7031
45 Mapoly0080s0041 [PTHR14894] CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3; [PF05600] Protein of unknown function (DUF773); [KOG2607] CDK5 activator-binding protein49.210.6225
46 Mapoly0048s0058 [PTHR12821] BYSTIN; [KOG3871] Cell adhesion complex protein bystin; [PTHR12821:SF0] SUBFAMILY NOT NAMED; [PF05291] Bystin49.720.7486
47 Mapoly0182s0013 [PF07719] Tetratricopeptide repeat; [PF13414] TPR repeat; [KOG2449] Methylmalonate semialdehyde dehydrogenase; [PTHR22904] TPR REPEAT CONTAINING PROTEIN50.500.6818
48 Mapoly0013s0023 [GO:0000287] magnesium ion binding; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF03483] B3/4 domain; [GO:0005737] cytoplasm; [K01890] phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]; [GO:0004826] phenylalanine-tRNA ligase activity; [PF03484] tRNA synthetase B5 domain; [6.1.1.20] Phenylalanine--tRNA ligase.; [GO:0043039] tRNA aminoacylation; [GO:0006432] phenylalanyl-tRNA aminoacylation; [GO:0000049] tRNA binding; [KOG2472] Phenylalanyl-tRNA synthetase beta subunit; [GO:0004812] aminoacyl-tRNA ligase activity; [PTHR10947] PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47; [PF01409] tRNA synthetases class II core domain (F)50.890.7244
49 Mapoly0006s0254 [PTHR13026:SF0] SUBFAMILY NOT NAMED; [PTHR13026] NNP-1 PROTEIN (NOVEL NUCLEAR PROTEIN 1) (NOP52); [GO:0030688] preribosome, small subunit precursor; [PF05997] Nucleolar protein,Nop52; [GO:0006364] rRNA processing52.020.7202
50 Mapoly0132s0039 [KOG2780] Ribosome biogenesis protein RPF1, contains IMP4 domain; [PTHR22734:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PTHR22734] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PF04427] Brix domain54.680.7448
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