Guide Gene

Gene ID
Mapoly0138s0042
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02725] 20S proteasome subunit alpha 6 [EC:3.4.25.1]; [KOG0863] 20S proteasome, regulatory subunit alpha type PSMA1/PRE5; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PTHR11599:SF12] PROTEASOME SUBUNIT ALPHA TYPE 1; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0138s0042 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02725] 20S proteasome subunit alpha 6 [EC:3.4.25.1]; [KOG0863] 20S proteasome, regulatory subunit alpha type PSMA1/PRE5; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PTHR11599:SF12] PROTEASOME SUBUNIT ALPHA TYPE 1; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA 0.00 1.0000
1 Mapoly0085s0078 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23073:SF7] 26S PROTEASE REGULATORY SUBUNIT 6A; [K03065] 26S proteasome regulatory subunit T5; [KOG0652] 26S proteasome regulatory complex, ATPase RPT51.000.8823
2 Mapoly0031s0139 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0729] 26S proteasome regulatory complex, ATPase RPT1; [PF00004] ATPase family associated with various cellular activities (AAA); [K03061] 26S proteasome regulatory subunit T1; [PTHR23073:SF13] 26S PROTEASE REGULATORY SUBUNIT 72.000.8186
3 Mapoly0080s0084 [GO:0019773] proteasome core complex, alpha-subunit complex; [PTHR11599:SF14] PROTEASOME SUBUNIT ALPHA TYPE 5; [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0176] 20S proteasome, regulatory subunit alpha type PSMA5/PUP2; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [K02729] 20S proteasome subunit alpha 5 [EC:3.4.25.1]; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA2.000.8428
4 Mapoly0009s0112 [GO:0005524] ATP binding; [K03064] 26S proteasome regulatory subunit T4; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0651] 26S proteasome regulatory complex, ATPase RPT4; [PF00004] ATPase family associated with various cellular activities (AAA)2.450.8395
5 Mapoly0141s0030 [PTHR23139] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [KOG0130] RNA-binding protein RBM8/Tsunagi (RRM superfamily); [K12876] RNA-binding protein 8A; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)3.160.7727
6 Mapoly0015s0013 [GO:0000502] proteasome complex; [PTHR10758:SF2] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3; [GO:0005515] protein binding; [PTHR10758] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3; [PF08375] Proteasome regulatory subunit C-terminal; [KOG2581] 26S proteasome regulatory complex, subunit RPN3/PSMD3; [GO:0030234] enzyme regulator activity; [PF01399] PCI domain; [K03033] 26S proteasome regulatory subunit N3; [GO:0042176] regulation of protein catabolic process5.000.8153
7 Mapoly0005s0254 [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0173] 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1; [PTHR11599:SF44] SUBFAMILY NOT NAMED; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [K02739] 20S proteasome subunit beta 2 [EC:3.4.25.1]; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA6.480.8084
8 Mapoly0061s0113 [PTHR12692] DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATED; [PF04756] OST3 / OST6 family; [KOG2603] Oligosaccharyltransferase, gamma subunit; [PTHR12692:SF0] SUBFAMILY NOT NAMED7.350.7426
9 Mapoly0070s0083 [KOG2160] Armadillo/beta-catenin-like repeat-containing protein; [PTHR19316] PROTEIN FOLDING REGULATOR; [K09562] hsp70-interacting protein7.940.7209
10 Mapoly0053s0095 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF15] PROTEASOME SUBUNIT ALPHA TYPE 7; [KOG0183] 20S proteasome, regulatory subunit alpha type PSMA7/PRE6; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [K02731] 20S proteasome subunit alpha 4 [EC:3.4.25.1]; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA8.000.7943
11 Mapoly0061s0103 [PTHR19288] 4-NITROPHENYLPHOSPHATASE-RELATED; [KOG2882] p-Nitrophenyl phosphatase; [PF13344] Haloacid dehalogenase-like hydrolase; [PF13242] HAD-hyrolase-like8.430.6540
12 Mapoly0039s0004 [KOG2768] Translation initiation factor 2, beta subunit (eIF-2beta); [PF01873] Domain found in IF2B/IF5; [GO:0003743] translation initiation factor activity; [K03238] translation initiation factor eIF-2 beta subunit; [GO:0006413] translational initiation; [PTHR23001] EUKARYOTIC TRANSLATION INITIATION FACTOR8.720.7425
13 Mapoly0024s0118 -9.700.6366
14 Mapoly0083s0033 [PTHR10539] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13; [GO:0005515] protein binding; [KOG2908] 26S proteasome regulatory complex, subunit RPN9/PSMD13; [K03039] 26S proteasome regulatory subunit N9; [PF01399] PCI domain10.390.7769
15 Mapoly0170s0030 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0726] 26S proteasome regulatory complex, ATPase RPT2; [PTHR23073:SF9] 26S PROTEASE REGULATORY SUBUNIT 4; [PF00004] ATPase family associated with various cellular activities (AAA); [K03062] 26S proteasome regulatory subunit T210.390.7657
16 Mapoly0173s0007 [GO:0005515] protein binding; [PTHR10855:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; [KOG1498] 26S proteasome regulatory complex, subunit RPN5/PSMD12; [K03035] 26S proteasome regulatory subunit N5; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 412.490.7641
17 Mapoly0006s0112 [K09613] COP9 signalosome complex subunit 5 [EC:3.4.-.-]; [GO:0005515] protein binding; [PTHR10410:SF6] COP9 SIGNALOSOME COMPLEX SUBUNIT 5; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [3.4.-.-] Acting on peptide bonds (peptide hydrolases).; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [KOG1554] COP9 signalosome, subunit CSN512.690.7956
18 Mapoly0197s0012 [GO:0005515] protein binding; [K03030] 26S proteasome regulatory subunit N11; [PF13012] Maintenance of mitochondrial structure and function; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1555] 26S proteasome regulatory complex, subunit RPN11; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [PTHR10410:SF5] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1412.690.7183
19 Mapoly0112s0013 [PTHR11210] RING BOX; [KOG2930] SCF ubiquitin ligase, Rbx1 component; [PTHR11210:SF20] APC11 (ANAPHASE-PROMOTING COMPLEX/CYCLOSOME 11), PROTEIN BINDING / ZINC ION BIN; [GO:0008270] zinc ion binding; [K03868] RING-box protein 1; [PF12678] RING-H2 zinc finger14.070.7199
20 Mapoly0008s0139 [GO:0005524] ATP binding; [KOG0727] 26S proteasome regulatory complex, ATPase RPT3; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [K03063] 26S proteasome regulatory subunit T3; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23073:SF8] 26S PROTEASE REGULATORY SUBUNIT 6B15.300.7164
21 Mapoly0040s0040 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3083] Prohibitin; [PF01145] SPFH domain / Band 7 family16.580.7666
22 Mapoly0007s0196 [KOG4655] U3 small nucleolar ribonucleoprotein (snoRNP) component; [GO:0003723] RNA binding; [PTHR11831:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K14560] U3 small nucleolar ribonucleoprotein protein IMP3; [PF01479] S4 domain16.880.7580
23 Mapoly0014s0186 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3090] Prohibitin-like protein; [PF01145] SPFH domain / Band 7 family19.180.7538
24 Mapoly0008s0275 [GO:0006486] protein glycosylation; [GO:0005783] endoplasmic reticulum; [GO:0004579] dolichyl-diphosphooligosaccharide-protein glycotransferase activity; [PTHR21049:SF0] SUBFAMILY NOT NAMED; [K12666] oligosaccharyltransferase complex subunit alpha (ribophorin I); [PF04597] Ribophorin I; [KOG2291] Oligosaccharyltransferase, alpha subunit (ribophorin I); [GO:0016021] integral to membrane; [PTHR21049] RIBOPHORIN I20.000.6988
25 Mapoly0019s0015 [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02732] 20S proteasome subunit beta 6 [EC:3.4.25.1]; [GO:0004298] threonine-type endopeptidase activity; [KOG0179] 20S proteasome, regulatory subunit beta type PSMB1/PRE7; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA20.830.7618
26 Mapoly0088s0010 [KOG4199] Uncharacterized conserved protein; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR22895] UNCHARACTERIZED21.210.6776
27 Mapoly0012s0096 -23.240.7045
28 Mapoly0108s0062 [K03016] DNA-directed RNA polymerases I, II, and III subunit RPABC3; [PTHR10917:SF0] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3; [PTHR10917] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3; [PF03870] RNA polymerase Rpb8; [KOG3400] RNA polymerase subunit 8; [GO:0006351] transcription, DNA-dependent23.470.7129
29 Mapoly0148s0015 [PF04969] CS domain; [PF09032] Siah interacting protein, N terminal; [KOG3260] Calcyclin-binding protein CacyBP; [PF05002] SGS domain; [K04507] calcyclin binding protein; [PTHR13164] CALICYLIN BINDING PROTEIN23.810.6449
30 Mapoly0080s0041 [PTHR14894] CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3; [PF05600] Protein of unknown function (DUF773); [KOG2607] CDK5 activator-binding protein25.300.6452
31 Mapoly0051s0019 [KOG2273] Membrane coat complex Retromer, subunit VPS5/SNX1, Sorting nexins, and related PX domain-containing proteins; [PTHR10555] SORTING NEXIN; [PF00787] PX domain; [PF09325] Vps5 C terminal like; [GO:0035091] phosphatidylinositol binding26.040.6190
32 Mapoly0011s0012 [GO:0016020] membrane; [KOG2620] Prohibitins and stomatins of the PID superfamily; [PTHR10264] BAND 7 PROTEIN-RELATED; [PTHR10264:SF27] UNCHARACTERIZED; [PF01145] SPFH domain / Band 7 family26.080.7476
33 Mapoly0075s0044 -26.550.6857
34 Mapoly0001s0445 [GO:0005840] ribosome; [KOG1711] Mitochondrial/chloroplast ribosomal protein L22; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR13501:SF1] SUBFAMILY NOT NAMED; [PTHR13501] CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED; [PF00237] Ribosomal protein L22p/L17e; [GO:0006412] translation28.140.7179
35 Mapoly0010s0007 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit28.740.6643
36 Mapoly0123s0037 [PF04927] Seed maturation protein29.100.6128
37 Mapoly0066s0099 [GO:0005840] ribosome; [PF01165] Ribosomal protein S21; [PTHR21109:SF0] SUBFAMILY NOT NAMED; [PTHR21109] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S21; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation29.560.6911
38 Mapoly0114s0041 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0879] U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [K09567] peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]; [PTHR11071:SF58] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H, PPIH36.410.7054
39 Mapoly0005s0216 [K12177] COP9 signalosome complex subunit 3; [GO:0005515] protein binding; [KOG2582] COP9 signalosome, subunit CSN3; [PTHR10758] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3; [PF01399] PCI domain; [PTHR10758:SF1] COP9 SIGNALOSOME COMPLEX SUBUNIT 336.990.7017
40 Mapoly0084s0068 [PTHR10971] MRNA EXPORT FACTOR AND BUB3; [GO:0005515] protein binding; [K14298] mRNA export factor; [PTHR10971:SF11] MRNA EXPORT FACTOR; [PF00400] WD domain, G-beta repeat; [KOG0647] mRNA export protein (contains WD40 repeats)40.000.7301
41 Mapoly0071s0017 [GO:0005838] proteasome regulatory particle; [PTHR12387] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8; [K03031] 26S proteasome regulatory subunit N12; [GO:0006508] proteolysis; [KOG3151] 26S proteasome regulatory complex, subunit RPN12/PSMD8; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family41.420.7056
42 Mapoly0030s0026 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PTHR11545:SF6] MITOCHONDRIAL RIBOSOMAL PROTEIN L13; [KOG3203] Mitochondrial/chloroplast ribosomal protein L13; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13; [K02871] large subunit ribosomal protein L1343.270.6993
43 Mapoly0077s0044 [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE43.490.6641
44 Mapoly0001s0351 [KOG3404] G10 protein/predicted nuclear transcription regulator; [PTHR19411] G10 PROTEIN HOMOLOG; [PF01125] G10 protein; [GO:0005634] nucleus; [K12873] bud site selection protein 3144.160.6473
45 Mapoly0020s0168 [PTHR10898] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM9; [KOG3479] Mitochondrial import inner membrane translocase, subunit TIM9; [PF02953] Tim10/DDP family zinc finger44.720.7168
46 Mapoly0144s0016 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [PTHR10352] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G; [PF12353] Eukaryotic translation initiation factor 3 subunit G; [K03248] translation initiation factor eIF-3 subunit 4; [GO:0003676] nucleic acid binding; [KOG0122] Translation initiation factor 3, subunit g (eIF-3g); [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)44.900.6623
47 Mapoly0008s0129 [PTHR13768] SOLUBLE NSF ATTACHMENT PROTEIN (SNAP); [KOG1585] Protein required for fusion of vesicles in vesicular transport, gamma-SNAP; [GO:0006886] intracellular protein transport; [PTHR13768:SF2] GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN (SNAP-GAMMA); [PF14938] Soluble NSF attachment protein, SNAP45.520.6011
48 Mapoly0051s0089 [GO:0003677] DNA binding; [K03013] DNA-directed RNA polymerases I, II, and III subunit RPABC1; [PF03871] RNA polymerase Rpb5, N-terminal domain; [PTHR10535] FAMILY NOT NAMED; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF01191] RNA polymerase Rpb5, C-terminal domain; [GO:0003899] DNA-directed RNA polymerase activity; [KOG3218] RNA polymerase, 25-kDa subunit (common to polymerases I, II and III)46.370.6938
49 Mapoly0099s0028 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0360] Chaperonin complex component, TCP-1 alpha subunit (CCT1)47.340.7154
50 Mapoly0002s0206 [PF10213] Mitochondrial ribosomal subunit protein; [PTHR13490] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S2847.750.6666
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