Guide Gene

Gene ID
Mapoly0006s0112
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K09613] COP9 signalosome complex subunit 5 [EC:3.4.-.-]; [GO:0005515] protein binding; [PTHR10410:SF6] COP9 SIGNALOSOME COMPLEX SUBUNIT 5; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [3.4.-.-] Acting on peptide bonds (peptide hydrolases).; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [KOG1554] COP9 signalosome, subunit CSN5

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0006s0112 [K09613] COP9 signalosome complex subunit 5 [EC:3.4.-.-]; [GO:0005515] protein binding; [PTHR10410:SF6] COP9 SIGNALOSOME COMPLEX SUBUNIT 5; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [3.4.-.-] Acting on peptide bonds (peptide hydrolases).; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [KOG1554] COP9 signalosome, subunit CSN5 0.00 1.0000
1 Mapoly0036s0151 [PF00268] Ribonucleotide reductase, small chain; [GO:0055114] oxidation-reduction process; [K10808] ribonucleoside-diphosphate reductase subunit M2 [EC:1.17.4.1]; [PTHR23409] RIBONUCLEOSIDE-DIPHOSPHATE REDUCTASE SMALL CHAIN; [1.17.4.1] Ribonucleoside-diphosphate reductase.; [KOG1567] Ribonucleotide reductase, beta subunit; [GO:0009186] deoxyribonucleoside diphosphate metabolic process1.410.8520
2 Mapoly0015s0013 [GO:0000502] proteasome complex; [PTHR10758:SF2] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3; [GO:0005515] protein binding; [PTHR10758] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3; [PF08375] Proteasome regulatory subunit C-terminal; [KOG2581] 26S proteasome regulatory complex, subunit RPN3/PSMD3; [GO:0030234] enzyme regulator activity; [PF01399] PCI domain; [K03033] 26S proteasome regulatory subunit N3; [GO:0042176] regulation of protein catabolic process1.730.8352
3 Mapoly0005s0216 [K12177] COP9 signalosome complex subunit 3; [GO:0005515] protein binding; [KOG2582] COP9 signalosome, subunit CSN3; [PTHR10758] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3; [PF01399] PCI domain; [PTHR10758:SF1] COP9 SIGNALOSOME COMPLEX SUBUNIT 32.830.8289
4 Mapoly0001s0011 [K02219] cyclin-dependent kinase regulatory subunit CKS1; [KOG3484] Cyclin-dependent protein kinase CDC28, regulatory subunit CKS1, and related proteins; [PF01111] Cyclin-dependent kinase regulatory subunit; [GO:0016538] cyclin-dependent protein serine/threonine kinase regulator activity; [GO:0007049] cell cycle; [PTHR23415] CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP76.000.8246
5 Mapoly0071s0017 [GO:0005838] proteasome regulatory particle; [PTHR12387] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8; [K03031] 26S proteasome regulatory subunit N12; [GO:0006508] proteolysis; [KOG3151] 26S proteasome regulatory complex, subunit RPN12/PSMD8; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family6.000.8101
6 Mapoly0055s0064 -8.600.8511
7 Mapoly0088s0010 [KOG4199] Uncharacterized conserved protein; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR22895] UNCHARACTERIZED8.660.7447
8 Mapoly0099s0028 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0360] Chaperonin complex component, TCP-1 alpha subunit (CCT1)8.770.8238
9 Mapoly0170s0030 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0726] 26S proteasome regulatory complex, ATPase RPT2; [PTHR23073:SF9] 26S PROTEASE REGULATORY SUBUNIT 4; [PF00004] ATPase family associated with various cellular activities (AAA); [K03062] 26S proteasome regulatory subunit T212.250.7867
10 Mapoly0027s0144 [GO:0016272] prefoldin complex; [KOG3501] Molecular chaperone Prefoldin, subunit 1; [PTHR20903] PREFOLDIN SUBUNIT 1-RELATED; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding; [PF01920] Prefoldin subunit12.410.8101
11 Mapoly0138s0042 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02725] 20S proteasome subunit alpha 6 [EC:3.4.25.1]; [KOG0863] 20S proteasome, regulatory subunit alpha type PSMA1/PRE5; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PTHR11599:SF12] PROTEASOME SUBUNIT ALPHA TYPE 1; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA12.690.7956
12 Mapoly0077s0014 [PTHR21148:SF12] PHOSDUCIN; [KOG1672] ATP binding protein; [GO:0045454] cell redox homeostasis; [PTHR21148] PHOSDUCIN-RELATED; [PF00085] Thioredoxin12.730.7683
13 Mapoly0083s0033 [PTHR10539] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13; [GO:0005515] protein binding; [KOG2908] 26S proteasome regulatory complex, subunit RPN9/PSMD13; [K03039] 26S proteasome regulatory subunit N9; [PF01399] PCI domain13.230.7951
14 Mapoly0034s0101 -13.490.7934
15 Mapoly0047s0069 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0358] Chaperonin complex component, TCP-1 delta subunit (CCT4)13.860.8153
16 Mapoly0162s0019 [GO:0005840] ribosome; [KOG1624] Mitochondrial/chloroplast ribosomal protein L4; [GO:0003735] structural constituent of ribosome; [K02926] large subunit ribosomal protein L4; [PF00573] Ribosomal protein L4/L1 family; [PTHR10746] 50S RIBOSOMAL PROTEIN L4; [GO:0006412] translation14.490.8045
17 Mapoly0009s0121 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [KOG0364] Chaperonin complex component, TCP-1 gamma subunit (CCT3); [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding16.000.8035
18 Mapoly0008s0139 [GO:0005524] ATP binding; [KOG0727] 26S proteasome regulatory complex, ATPase RPT3; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [K03063] 26S proteasome regulatory subunit T3; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23073:SF8] 26S PROTEASE REGULATORY SUBUNIT 6B16.060.7404
19 Mapoly0029s0022 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [PF06273] Plant specific eukaryotic initiation factor 4B; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding16.160.7902
20 Mapoly0013s0016 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [PTHR31614] FAMILY NOT NAMED; [GO:0005634] nucleus; [GO:0006281] DNA repair; [PF08661] Replication factor A protein 3; [GO:0006310] DNA recombination17.660.8080
21 Mapoly0045s0042 [KOG2475] CDC45 (cell division cycle 45)-like protein; [GO:0006270] DNA replication initiation; [PF02724] CDC45-like protein; [PTHR10507:SF0] CDC45-RELATED PROTEIN; [PTHR10507] CDC45-RELATED PROTEIN; [K06628] cell division control protein 4520.000.8281
22 Mapoly0012s0108 [K03123] transcription initiation factor TFIIA small subunit; [PF02751] Transcription initiation factor IIA, gamma subunit; [PTHR10966] TRANSCRIPTION INITIATION FACTOR IIA SUBUNIT 2; [KOG3463] Transcription initiation factor IIA, gamma subunit; [GO:0005672] transcription factor TFIIA complex; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PF02268] Transcription initiation factor IIA, gamma subunit, helical domain23.690.7856
23 Mapoly0051s0088 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0357] Chaperonin complex component, TCP-1 epsilon subunit (CCT5)23.810.7925
24 Mapoly0109s0019 [KOG1375] Beta tubulin; [PF00091] Tubulin/FtsZ family, GTPase domain; [GO:0005874] microtubule; [K07375] tubulin beta; [PTHR11588] TUBULIN; [GO:0007017] microtubule-based process; [PF03953] Tubulin C-terminal domain; [GO:0006184] GTP catabolic process; [GO:0003924] GTPase activity; [GO:0051258] protein polymerization; [GO:0043234] protein complex; [GO:0005525] GTP binding23.960.7793
25 Mapoly0166s0018 [K10739] replication factor A2; [KOG3108] Single-stranded DNA-binding replication protein A (RPA), medium (30 kD) subunit; [PF08784] Replication protein A C terminal; [PTHR13989] REPLICATION PROTEIN A-RELATED; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain24.920.8145
26 Mapoly0064s0110 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [PTHR13394] ORIGIN RECOGNITION COMPLEX SUBUNIT 6; [PF05460] Origin recognition complex subunit 6 (ORC6); [GO:0005664] nuclear origin of replication recognition complex; [K02608] origin recognition complex subunit 6; [PTHR13394:SF0] SUBFAMILY NOT NAMED; [KOG4557] Origin recognition complex, subunit 626.650.8111
27 Mapoly0080s0084 [GO:0019773] proteasome core complex, alpha-subunit complex; [PTHR11599:SF14] PROTEASOME SUBUNIT ALPHA TYPE 5; [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0176] 20S proteasome, regulatory subunit alpha type PSMA5/PUP2; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [K02729] 20S proteasome subunit alpha 5 [EC:3.4.25.1]; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA27.130.7382
28 Mapoly0084s0054 [K03029] 26S proteasome regulatory subunit N10; [PF02809] Ubiquitin interaction motif; [PF13519] von Willebrand factor type A domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR10223] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4; [GO:0008540] proteasome regulatory particle, base subcomplex; [KOG2884] 26S proteasome regulatory complex, subunit RPN10/PSMD428.000.7923
29 Mapoly0075s0032 [GO:0003677] DNA binding; [GO:0006275] regulation of DNA replication; [GO:0030337] DNA polymerase processivity factor activity; [PTHR11352] PROLIFERATING CELL NUCLEAR ANTIGEN; [PF00705] Proliferating cell nuclear antigen, N-terminal domain; [K04802] proliferating cell nuclear antigen; [KOG1636] DNA polymerase delta processivity factor (proliferating cell nuclear antigen); [PF02747] Proliferating cell nuclear antigen, C-terminal domain28.910.7958
30 Mapoly0031s0139 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0729] 26S proteasome regulatory complex, ATPase RPT1; [PF00004] ATPase family associated with various cellular activities (AAA); [K03061] 26S proteasome regulatory subunit T1; [PTHR23073:SF13] 26S PROTEASE REGULATORY SUBUNIT 730.850.7487
31 Mapoly0139s0003 [PF11523] Protein of unknown function (DUF3223)32.620.7802
32 Mapoly0013s0040 [GO:0005524] ATP binding; [KOG0359] Chaperonin complex component, TCP-1 zeta subunit (CCT6); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family32.860.7798
33 Mapoly0009s0112 [GO:0005524] ATP binding; [K03064] 26S proteasome regulatory subunit T4; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0651] 26S proteasome regulatory complex, ATPase RPT4; [PF00004] ATPase family associated with various cellular activities (AAA)34.960.7337
34 Mapoly0035s0099 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [K02321] DNA polymerase alpha subunit B; [PTHR23061:SF12] SUBFAMILY NOT NAMED; [KOG1625] DNA polymerase alpha-primase complex, polymerase-associated subunit B; [PF04042] DNA polymerase alpha/epsilon subunit B; [PTHR23061] DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT; [GO:0003887] DNA-directed DNA polymerase activity; [PF08418] DNA polymerase alpha subunit B N-terminal36.850.8070
35 Mapoly0015s0123 [GO:0003723] RNA binding; [PF07541] Eukaryotic translation initiation factor 2 alpha subunit; [GO:0005850] eukaryotic translation initiation factor 2 complex; [PTHR10602] EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1; [K03237] translation initiation factor eIF-2 alpha subunit; [GO:0003743] translation initiation factor activity; [PTHR10602:SF0] EUKARYOTIC TRANSLATION INITIATION FACTOR 2 SUBUNIT 1; [PF00575] S1 RNA binding domain; [KOG2916] Translation initiation factor 2, alpha subunit (eIF-2alpha)37.150.7610
36 Mapoly0001s0351 [KOG3404] G10 protein/predicted nuclear transcription regulator; [PTHR19411] G10 PROTEIN HOMOLOG; [PF01125] G10 protein; [GO:0005634] nucleus; [K12873] bud site selection protein 3137.230.6838
37 Mapoly0179s0014 [PTHR11586:SF1] SUBFAMILY NOT NAMED; [KOG2241] tRNA-binding protein; [PF01588] Putative tRNA binding domain; [GO:0000049] tRNA binding; [PTHR11586] FAMILY NOT NAMED38.170.7730
38 Mapoly0177s0008 [GO:0006260] DNA replication; [PF13191] AAA ATPase domain; [GO:0005634] nucleus; [KOG2543] Origin recognition complex, subunit 5; [PF14630] Origin recognition complex (ORC) subunit 5 C-terminus; [PTHR12705] ORIGIN RECOGNITION COMPLEX SUBUNIT 5; [GO:0000808] origin recognition complex; [K02607] origin recognition complex subunit 539.230.7972
39 Mapoly0053s0095 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF15] PROTEASOME SUBUNIT ALPHA TYPE 7; [KOG0183] 20S proteasome, regulatory subunit alpha type PSMA7/PRE6; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [K02731] 20S proteasome subunit alpha 4 [EC:3.4.25.1]; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA39.420.7448
40 Mapoly0001s0392 [KOG0121] Nuclear cap-binding protein complex, subunit CBP20 (RRM superfamily); [GO:0000339] RNA cap binding; [GO:0045292] mRNA cis splicing, via spliceosome; [K12883] nuclear cap-binding protein subunit 2; [GO:0003676] nucleic acid binding; [GO:0005846] nuclear cap binding complex; [PTHR18847] 20 KD NUCLEAR CAP BINDING PROTEIN; [PTHR18847:SF0] SUBFAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)40.990.7421
41 Mapoly0092s0049 [PTHR10501] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; [K11094] U2 small nuclear ribonucleoprotein B''; [GO:0000398] mRNA splicing, via spliceosome; [KOG4206] Spliceosomal protein snRNP-U1A/U2B; [GO:0003676] nucleic acid binding; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [GO:0017069] snRNA binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)41.130.7840
42 Mapoly0001s0053 -41.350.7327
43 Mapoly0001s0445 [GO:0005840] ribosome; [KOG1711] Mitochondrial/chloroplast ribosomal protein L22; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR13501:SF1] SUBFAMILY NOT NAMED; [PTHR13501] CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED; [PF00237] Ribosomal protein L22p/L17e; [GO:0006412] translation41.580.7389
44 Mapoly0085s0078 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23073:SF7] 26S PROTEASE REGULATORY SUBUNIT 6A; [K03065] 26S proteasome regulatory subunit T5; [KOG0652] 26S proteasome regulatory complex, ATPase RPT542.600.7195
45 Mapoly0010s0124 [K14320] aladin; [KOG2139] WD40 repeat protein; [GO:0005515] protein binding; [PTHR14494] ALADIN/ADRACALIN/AAAS; [PTHR14494:SF0] SUBFAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat43.080.7632
46 Mapoly0071s0007 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [K09494] T-complex protein 1 subunit beta; [KOG0363] Chaperonin complex component, TCP-1 beta subunit (CCT2)44.600.7801
47 Mapoly0078s0017 -45.500.8004
48 Mapoly0001s0105 [K02541] minichromosome maintenance protein 3; [KOG0479] DNA replication licensing factor, MCM3 component; [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PTHR11630:SF46] DNA REPLICATION LICENSING FACTOR MCM3; [PF00493] MCM2/3/5 family; [PTHR11630] DNA REPLICATION LICENSING FACTOR; [PF14551] MCM N-terminal domain45.910.8016
49 Mapoly0173s0007 [GO:0005515] protein binding; [PTHR10855:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; [KOG1498] 26S proteasome regulatory complex, subunit RPN5/PSMD12; [K03035] 26S proteasome regulatory subunit N5; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 446.180.7423
50 Mapoly0030s0020 [KOG2545] Conserved membrane protein; [PTHR13489:SF0] SUBFAMILY NOT NAMED; [PF13615] Putative alanine racemase; [PF09739] Mini-chromosome maintenance replisome factor; [PTHR13489] UNCHARACTERIZED49.190.7972
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