Guide Gene
- Gene ID
- Mapoly0141s0030
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR23139] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [KOG0130] RNA-binding protein RBM8/Tsunagi (RRM superfamily); [K12876] RNA-binding protein 8A; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0141s0030 [PTHR23139] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [KOG0130] RNA-binding protein RBM8/Tsunagi (RRM superfamily); [K12876] RNA-binding protein 8A; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00 1.0000 1 Mapoly0039s0004 [KOG2768] Translation initiation factor 2, beta subunit (eIF-2beta); [PF01873] Domain found in IF2B/IF5; [GO:0003743] translation initiation factor activity; [K03238] translation initiation factor eIF-2 beta subunit; [GO:0006413] translational initiation; [PTHR23001] EUKARYOTIC TRANSLATION INITIATION FACTOR 2.45 0.7558 2 Mapoly0138s0042 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02725] 20S proteasome subunit alpha 6 [EC:3.4.25.1]; [KOG0863] 20S proteasome, regulatory subunit alpha type PSMA1/PRE5; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PTHR11599:SF12] PROTEASOME SUBUNIT ALPHA TYPE 1; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA 3.16 0.7727 3 Mapoly0197s0012 [GO:0005515] protein binding; [K03030] 26S proteasome regulatory subunit N11; [PF13012] Maintenance of mitochondrial structure and function; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1555] 26S proteasome regulatory complex, subunit RPN11; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [PTHR10410:SF5] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 14 4.00 0.7408 4 Mapoly0001s0351 [KOG3404] G10 protein/predicted nuclear transcription regulator; [PTHR19411] G10 PROTEIN HOMOLOG; [PF01125] G10 protein; [GO:0005634] nucleus; [K12873] bud site selection protein 31 6.93 0.6861 5 Mapoly0112s0059 [GO:0005524] ATP binding; [KOG0328] Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily; [PTHR24031:SF57] SUBFAMILY NOT NAMED; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [K13025] ATP-dependent RNA helicase [EC:3.6.4.13]; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 8.12 0.7548 6 Mapoly0144s0016 [GO:0005737] cytoplasm; [GO:0003743] translation initiation factor activity; [PTHR10352] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT G; [PF12353] Eukaryotic translation initiation factor 3 subunit G; [K03248] translation initiation factor eIF-3 subunit 4; [GO:0003676] nucleic acid binding; [KOG0122] Translation initiation factor 3, subunit g (eIF-3g); [GO:0005852] eukaryotic translation initiation factor 3 complex; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 8.77 0.6954 7 Mapoly0009s0112 [GO:0005524] ATP binding; [K03064] 26S proteasome regulatory subunit T4; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0651] 26S proteasome regulatory complex, ATPase RPT4; [PF00004] ATPase family associated with various cellular activities (AAA) 10.49 0.7161 8 Mapoly0085s0078 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23073:SF7] 26S PROTEASE REGULATORY SUBUNIT 6A; [K03065] 26S proteasome regulatory subunit T5; [KOG0652] 26S proteasome regulatory complex, ATPase RPT5 11.22 0.7090 9 Mapoly0123s0037 [PF04927] Seed maturation protein 14.49 0.6153 10 Mapoly0008s0129 [PTHR13768] SOLUBLE NSF ATTACHMENT PROTEIN (SNAP); [KOG1585] Protein required for fusion of vesicles in vesicular transport, gamma-SNAP; [GO:0006886] intracellular protein transport; [PTHR13768:SF2] GAMMA-SOLUBLE NSF ATTACHMENT PROTEIN (SNAP-GAMMA); [PF14938] Soluble NSF attachment protein, SNAP 15.87 0.6238 11 Mapoly0112s0013 [PTHR11210] RING BOX; [KOG2930] SCF ubiquitin ligase, Rbx1 component; [PTHR11210:SF20] APC11 (ANAPHASE-PROMOTING COMPLEX/CYCLOSOME 11), PROTEIN BINDING / ZINC ION BIN; [GO:0008270] zinc ion binding; [K03868] RING-box protein 1; [PF12678] RING-H2 zinc finger 20.07 0.6635 12 Mapoly0005s0254 [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0173] 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1; [PTHR11599:SF44] SUBFAMILY NOT NAMED; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [K02739] 20S proteasome subunit beta 2 [EC:3.4.25.1]; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA 25.90 0.6666 13 Mapoly0124s0040 [K12625] U6 snRNA-associated Sm-like protein LSm6; [KOG1783] Small nuclear ribonucleoprotein F; [PTHR11021] SMALL NUCLEAR RIBONUCLEOPROTEIN F (SNRNP-F); [PTHR11021:SF1] SMALL NUCLEAR RIBONUCLEOPROTEIN; [PF01423] LSM domain 30.58 0.5980 14 Mapoly0031s0139 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0729] 26S proteasome regulatory complex, ATPase RPT1; [PF00004] ATPase family associated with various cellular activities (AAA); [K03061] 26S proteasome regulatory subunit T1; [PTHR23073:SF13] 26S PROTEASE REGULATORY SUBUNIT 7 33.14 0.6506 15 Mapoly0061s0113 [PTHR12692] DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE-RELATED; [PF04756] OST3 / OST6 family; [KOG2603] Oligosaccharyltransferase, gamma subunit; [PTHR12692:SF0] SUBFAMILY NOT NAMED 33.63 0.6224 16 Mapoly0094s0023 [PTHR13582] M-PHASE PHOSPHOPROTEIN 6; [PF10175] M-phase phosphoprotein 6 34.29 0.6406 17 Mapoly0173s0007 [GO:0005515] protein binding; [PTHR10855:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; [KOG1498] 26S proteasome regulatory complex, subunit RPN5/PSMD12; [K03035] 26S proteasome regulatory subunit N5; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4 34.64 0.6643 18 Mapoly0035s0098 - 35.62 0.6839 19 Mapoly0007s0196 [KOG4655] U3 small nucleolar ribonucleoprotein (snoRNP) component; [GO:0003723] RNA binding; [PTHR11831:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K14560] U3 small nucleolar ribonucleoprotein protein IMP3; [PF01479] S4 domain 36.19 0.6689 20 Mapoly0010s0007 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit 38.97 0.6205 21 Mapoly0191s0008 [PTHR13002] C3ORF1 PROTEIN-RELATED; [PF02466] Tim17/Tim22/Tim23/Pmp24 family 40.50 0.6058 22 Mapoly0003s0233 - 41.44 0.6551 23 Mapoly0034s0066 [GO:0005840] ribosome; [PTHR21349] 50S RIBOSOMAL PROTEIN L21; [KOG1686] Mitochondrial/chloroplast ribosomal L21 protein; [PF00829] Ribosomal prokaryotic L21 protein 43.82 0.6351 24 Mapoly0049s0058 [GO:0005515] protein binding; [K12880] THO complex subunit 3; [KOG1407] WD40 repeat protein; [PF00400] WD domain, G-beta repeat; [PTHR22839] THO COMPLEX SUBUNIT 3 (THO3) 45.17 0.6067 25 Mapoly0011s0013 [PTHR13264:SF5] SUBFAMILY NOT NAMED; [K12868] pre-mRNA-splicing factor SYF2; [PTHR13264] GCIP-INTERACTING PROTEIN P29; [KOG2609] Cyclin D-interacting protein GCIP; [PF08231] SYF2 splicing factor 45.46 0.5987 26 Mapoly0012s0096 - 51.26 0.6137 27 Mapoly0080s0084 [GO:0019773] proteasome core complex, alpha-subunit complex; [PTHR11599:SF14] PROTEASOME SUBUNIT ALPHA TYPE 5; [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0176] 20S proteasome, regulatory subunit alpha type PSMA5/PUP2; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [K02729] 20S proteasome subunit alpha 5 [EC:3.4.25.1]; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA 55.62 0.6167 28 Mapoly0187s0004 [KOG0533] RRM motif-containing protein; [PTHR15241] TRANSFORMER-2-RELATED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 57.71 0.6589 29 Mapoly0014s0186 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3090] Prohibitin-like protein; [PF01145] SPFH domain / Band 7 family 57.75 0.6368 30 Mapoly0108s0055 [GO:0016020] membrane; [PTHR12383] PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED; [GO:0008236] serine-type peptidase activity; [KOG1568] Mitochondrial inner membrane protease, subunit IMP2; [PTHR12383:SF5] MITOCHONDRIAL INNER MEMBRANE SIGNAL PEPTIDASE, PUTATIVE SERINE PEPTIDASE CLAN S; [GO:0006508] proteolysis 57.83 0.6078 31 Mapoly0001s0432 [PF08553] VID27 cytoplasmic protein; [PTHR31913] FAMILY NOT NAMED; [KOG2395] Protein involved in vacuole import and degradation 58.24 0.5816 32 Mapoly0148s0015 [PF04969] CS domain; [PF09032] Siah interacting protein, N terminal; [KOG3260] Calcyclin-binding protein CacyBP; [PF05002] SGS domain; [K04507] calcyclin binding protein; [PTHR13164] CALICYLIN BINDING PROTEIN 58.28 0.5735 33 Mapoly0040s0040 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3083] Prohibitin; [PF01145] SPFH domain / Band 7 family 63.69 0.6279 34 Mapoly0078s0032 [PF06325] Ribosomal protein L11 methyltransferase (PrmA); [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [GO:0005737] cytoplasm; [K11434] protein arginine N-methyltransferase 1 [EC:2.1.1.-]; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [GO:0008276] protein methyltransferase activity; [GO:0006479] protein methylation; [KOG1499] Protein arginine N-methyltransferase PRMT1 and related enzymes 64.81 0.6599 35 Mapoly0090s0067 [GO:0005515] protein binding; [KOG0302] Ribosome Assembly protein; [PTHR22850] WD40 REPEAT FAMILY; [PF12265] Histone-binding protein RBBP4 or subunit C of CAF1 complex; [PTHR22850:SF6] GLUTAMATE RICH WD REPEAT PROTEIN (GRWD); [PF00400] WD domain, G-beta repeat 70.09 0.6588 36 Mapoly0088s0010 [KOG4199] Uncharacterized conserved protein; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR22895] UNCHARACTERIZED 71.22 0.5920 37 Mapoly0114s0041 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0879] U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [K09567] peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]; [PTHR11071:SF58] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H, PPIH 71.41 0.6209 38 Mapoly0019s0138 [GO:0030833] regulation of actin filament polymerization; [KOG2826] Actin-related protein Arp2/3 complex, subunit ARPC2; [PF04045] Arp2/3 complex, 34 kD subunit p34-Arc; [GO:0005856] cytoskeleton; [PTHR12058] ARP2/3 COMPLEX 34 KDA SUBUNIT; [K05758] actin related protein 2/3 complex, subunit 2 72.10 0.6045 39 Mapoly0077s0044 [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE 72.33 0.6040 40 Mapoly0076s0035 [PF05773] RWD domain; [GO:0005515] protein binding; [PTHR12292] RWD DOMAIN-CONTAINING PROTEIN; [KOG4018] Uncharacterized conserved protein, contains RWD domain 74.87 0.5872 41 Mapoly0182s0013 [PF07719] Tetratricopeptide repeat; [PF13414] TPR repeat; [KOG2449] Methylmalonate semialdehyde dehydrogenase; [PTHR22904] TPR REPEAT CONTAINING PROTEIN 76.22 0.6127 42 Mapoly0084s0068 [PTHR10971] MRNA EXPORT FACTOR AND BUB3; [GO:0005515] protein binding; [K14298] mRNA export factor; [PTHR10971:SF11] MRNA EXPORT FACTOR; [PF00400] WD domain, G-beta repeat; [KOG0647] mRNA export protein (contains WD40 repeats) 77.21 0.6377 43 Mapoly0038s0106 - 81.24 0.5709 44 Mapoly0006s0064 [PTHR23002] ZINC FINGER CCHC DOMAIN CONTAINING PROTEIN; [PF14392] Zinc knuckle; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding 82.22 0.6416 45 Mapoly0008s0076 [GO:0005840] ribosome; [PTHR18804] FAMILY NOT NAMED; [GO:0003735] structural constituent of ribosome; [PF00444] Ribosomal protein L36; [GO:0005622] intracellular; [KOG4122] Mitochondrial/chloroplast ribosomal protein L36; [GO:0006412] translation 82.45 0.5793 46 Mapoly0048s0007 [GO:0005515] protein binding; [PTHR16288:SF0] SUBFAMILY NOT NAMED; [PTHR16288] WD40 REPEAT PROTEIN 4; [KOG0315] G-protein beta subunit-like protein (contains WD40 repeats); [PF00400] WD domain, G-beta repeat 84.30 0.6500 47 Mapoly0006s0106 [PF04051] Transport protein particle (TRAPP) component; [KOG3330] Transport protein particle (TRAPP) complex subunit; [PTHR13048] TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 3 84.81 0.5477 48 Mapoly0001s0052 [K12602] WD repeat-containing protein 61; [KOG0265] U5 snRNP-specific protein-like factor and related proteins; [GO:0005515] protein binding; [PF00400] WD domain, G-beta repeat; [PTHR22841] FAMILY NOT NAMED 84.91 0.5758 49 Mapoly0005s0236 [K14423] 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase [EC:1.14.13.72]; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [KOG0873] C-4 sterol methyl oxidase; [GO:0006633] fatty acid biosynthetic process; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [1.14.13.72] Methylsterol monooxygenase.; [PTHR11863] STEROL DESATURASE 87.12 0.5376 50 Mapoly0016s0053 [K14191] 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]; [2.1.1.183] 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase.; [PTHR11727] DIMETHYLADENOSINE TRANSFERASE; [GO:0000154] rRNA modification; [KOG0820] Ribosomal RNA adenine dimethylase; [GO:0000179] rRNA (adenine-N6,N6-)-dimethyltransferase activity; [PF00398] Ribosomal RNA adenine dimethylase; [GO:0008649] rRNA methyltransferase activity 93.54 0.6300