Guide Gene

Gene ID
Mapoly0019s0138
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0030833] regulation of actin filament polymerization; [KOG2826] Actin-related protein Arp2/3 complex, subunit ARPC2; [PF04045] Arp2/3 complex, 34 kD subunit p34-Arc; [GO:0005856] cytoskeleton; [PTHR12058] ARP2/3 COMPLEX 34 KDA SUBUNIT; [K05758] actin related protein 2/3 complex, subunit 2

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0019s0138 [GO:0030833] regulation of actin filament polymerization; [KOG2826] Actin-related protein Arp2/3 complex, subunit ARPC2; [PF04045] Arp2/3 complex, 34 kD subunit p34-Arc; [GO:0005856] cytoskeleton; [PTHR12058] ARP2/3 COMPLEX 34 KDA SUBUNIT; [K05758] actin related protein 2/3 complex, subunit 2 0.00 1.0000
1 Mapoly0005s0018 [KOG4508] Uncharacterized conserved protein; [PTHR15975] UNCHARACTERIZED; [PF10155] Uncharacterized conserved protein (DUF2363)3.000.7826
2 Mapoly0138s0043 [KOG1251] Serine racemase; [PF00291] Pyridoxal-phosphate dependent enzyme; [PTHR10314:SF36] THREONINE DEHYDRATASE-RELATED; [K12235] serine racemase [EC:5.1.1.18]; [5.1.1.18] Serine racemase.; [PTHR10314] SER/THR DEHYDRATASE, TRP SYNTHASE6.000.7188
3 Mapoly0064s0074 [PF02670] 1-deoxy-D-xylulose 5-phosphate reductoisomerase; [GO:0055114] oxidation-reduction process; [GO:0070402] NADPH binding; [GO:0005515] protein binding; [PF08436] 1-deoxy-D-xylulose 5-phosphate reductoisomerase C-terminal; [GO:0008299] isoprenoid biosynthetic process; [K00099] 1-deoxy-D-xylulose-5-phosphate reductoisomerase [EC:1.1.1.267]; [1.1.1.267] 1-deoxy-D-xylulose-5-phosphate reductoisomerase.; [PTHR30525] 1-DEOXY-D-XYLULOSE 5-PHOSPHATE REDUCTOISOMERASE; [GO:0046872] metal ion binding; [PF13288] DXP reductoisomerase C-terminal domain; [GO:0030604] 1-deoxy-D-xylulose-5-phosphate reductoisomerase activity6.320.6882
4 Mapoly0105s0008 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H47.620.7271
5 Mapoly0029s0083 [PTHR13063] ENOS INTERACTING PROTEIN; [K13125] nitric oxide synthase-interacting protein; [PF04641] Rtf2 RING-finger; [KOG3039] Uncharacterized conserved protein16.120.6834
6 Mapoly0056s0032 [KOG1222] Kinesin associated protein KAP; [PTHR15605:SF2] KINESIN-ASSOCIATED PROTEIN 3; [PF05804] Kinesin-associated protein (KAP); [GO:0005871] kinesin complex; [PTHR15605] KINESIN-ASSOCIATED PROTEINS; [GO:0019894] kinesin binding19.290.7048
7 Mapoly0006s0068 [KOG3219] Transcription initiation factor TFIID, subunit TAF11; [PTHR13218] FAMILY NOT NAMED; [GO:0005634] nucleus; [K03135] transcription initiation factor TFIID subunit 11; [GO:0006367] transcription initiation from RNA polymerase II promoter; [PF04719] hTAFII28-like protein conserved region20.980.6400
8 Mapoly0037s0072 [GO:0005515] protein binding; [PTHR21712] UNCHARACTERIZED; [PF00498] FHA domain22.690.7020
9 Mapoly0089s0026 -23.520.6885
10 Mapoly0128s0008 [GO:0016787] hydrolase activity; [PTHR31835] FAMILY NOT NAMED; [PF00293] NUDIX domain23.710.5541
11 Mapoly0062s0090 [KOG4172] Predicted E3 ubiquitin ligase; [PF06803] Protein of unknown function (DUF1232); [PTHR22894] UNCHARACTERIZED; [PF13920] Zinc finger, C3HC4 type (RING finger)25.810.6989
12 Mapoly0079s0037 [PTHR21467] HEAT-LIKE REPEAT-CONTAINING PROTEIN; [KOG0211] Protein phosphatase 2A regulatory subunit A and related proteins26.150.6823
13 Mapoly0039s0021 -28.640.6449
14 Mapoly0002s0172 [PF13837] Myb/SANT-like DNA-binding domain29.240.6851
15 Mapoly0093s0081 [PF10218] Uncharacterized conserved protein (DUF2054); [PF15024] Glycosyltransferase family 18; [PTHR13481] UNCHARACTERIZED31.980.6829
16 Mapoly0014s0114 [KOG2061] Uncharacterized MYND Zn-finger protein; [PF04194] Programmed cell death protein 2, C-terminal putative domain; [GO:0005737] cytoplasm; [PTHR12298] PCDC2 (PROGRAMMED CELL DEATH PROTEIN 2)-RELATED36.440.6725
17 Mapoly0150s0011 [GO:0055114] oxidation-reduction process; [KOG2742] Predicted oxidoreductase; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF01408] Oxidoreductase family, NAD-binding Rossmann fold; [PF02894] Oxidoreductase family, C-terminal alpha/beta domain; [PTHR22604] OXIDOREDUCTASES37.470.6026
18 Mapoly0001s0421 [KOG4178] Soluble epoxide hydrolase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family42.660.6577
19 Mapoly0014s0119 [GO:0006355] regulation of transcription, DNA-dependent; [K11308] histone acetyltransferase MYST1 [EC:2.3.1.48]; [PF11717] RNA binding activity-knot of a chromodomain; [PTHR10615] HISTONE ACETYLTRANSFERASE; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [GO:0005634] nucleus; [PF01853] MOZ/SAS family; [2.3.1.48] Histone acetyltransferase.; [KOG2747] Histone acetyltransferase (MYST family)42.830.6752
20 Mapoly0071s0006 [KOG1432] Predicted DNA repair exonuclease SIA1; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [PTHR32440] FAMILY NOT NAMED42.990.5970
21 Mapoly0257s0001 [GO:0055114] oxidation-reduction process; [KOG1186] Copper amine oxidase; [GO:0005507] copper ion binding; [PTHR10638] COPPER AMINE OXIDASE; [PF02727] Copper amine oxidase, N2 domain; [PF02728] Copper amine oxidase, N3 domain; [GO:0008131] primary amine oxidase activity; [GO:0048038] quinone binding; [GO:0009308] amine metabolic process; [PF01179] Copper amine oxidase, enzyme domain43.750.6273
22 Mapoly0187s0004 [KOG0533] RRM motif-containing protein; [PTHR15241] TRANSFORMER-2-RELATED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)46.310.6761
23 Mapoly0085s0078 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23073:SF7] 26S PROTEASE REGULATORY SUBUNIT 6A; [K03065] 26S proteasome regulatory subunit T5; [KOG0652] 26S proteasome regulatory complex, ATPase RPT546.580.6528
24 Mapoly0037s0047 [K11416] mono-ADP-ribosyltransferase sirtuin 6 [EC:2.4.2.31]; [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [2.4.2.31] NAD(+)--protein-arginine ADP-ribosyltransferase.; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [KOG1905] Class IV sirtuins (SIR2 family)46.900.6624
25 Mapoly0065s0036 [GO:0005737] cytoplasm; [GO:0017183] peptidyl-diphthamide biosynthetic process from peptidyl-histidine; [PF01866] Putative diphthamide synthesis protein; [PTHR10762:SF2] DIPHTHAMIDE BIOSYNTHESIS PROTEIN 2 (DPH2 HOMOLOG); [PTHR10762] DIPHTHAMIDE BIOSYNTHESIS PROTEIN46.960.6375
26 Mapoly0055s0101 [KOG3298] DNA-directed RNA polymerase subunit E'; [PF03876] SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397; [PTHR12709:SF3] RNA POLYMERASE RPB7, N-TERMINAL DOMAIN CONTAINING PROTEIN; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III47.050.6675
27 Mapoly0004s0283 [PTHR16295] TRAF-TYPE ZINC FINGER PROTEIN-RELATED50.200.6615
28 Mapoly0005s0244 [KOG4536] Predicted membrane protein; [PF10160] Predicted membrane protein; [PTHR15876] FAMILY NOT NAMED50.720.6554
29 Mapoly0013s0147 [KOG2361] Predicted methyltransferase; [PF13489] Methyltransferase domain; [PTHR22809] METHYLTRANSFERASE-RELATED51.000.6682
30 Mapoly0115s0002 -51.870.6620
31 Mapoly0008s0275 [GO:0006486] protein glycosylation; [GO:0005783] endoplasmic reticulum; [GO:0004579] dolichyl-diphosphooligosaccharide-protein glycotransferase activity; [PTHR21049:SF0] SUBFAMILY NOT NAMED; [K12666] oligosaccharyltransferase complex subunit alpha (ribophorin I); [PF04597] Ribophorin I; [KOG2291] Oligosaccharyltransferase, alpha subunit (ribophorin I); [GO:0016021] integral to membrane; [PTHR21049] RIBOPHORIN I54.960.6351
32 Mapoly0002s0154 -55.310.6669
33 Mapoly0025s0134 [GO:0005737] cytoplasm; [K08336] autophagy-related protein 12; [KOG3439] Protein conjugation factor involved in autophagy; [PTHR13385] AUTOPHAGY PROTEIN 12; [GO:0000045] autophagic vacuole assembly; [PF04110] Ubiquitin-like autophagy protein Apg1255.320.6270
34 Mapoly0113s0054 [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [3.5.1.-] In linear amides.; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [K11415] NAD-dependent deacetylase sirtuin 5 [EC:3.5.1.-]; [KOG2683] Sirtuin 4 and related class II sirtuins (SIR2 family)56.570.6459
35 Mapoly0032s0117 [PF06294] Domain of Unknown Function (DUF1042); [PTHR12509] SPERMATOGENESIS-ASSOCIATED 4-RELATED56.920.6745
36 Mapoly0138s0039 [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [KOG4332] Predicted sugar transporter; [PF05631] Protein of unknown function (DUF791); [PTHR24003:SF368] SUBFAMILY NOT NAMED57.630.6001
37 Mapoly0004s0141 [KOG4214] Myotrophin and similar proteins; [PTHR24188] ANKYRIN REPEAT PROTEIN; [PF12796] Ankyrin repeats (3 copies)59.330.6668
38 Mapoly0138s0047 -60.080.6470
39 Mapoly0011s0009 [GO:0016758] transferase activity, transferring hexosyl groups; [KOG2576] Glucosyltransferase - Alg8p; [K03849] alpha-1,3-glucosyltransferase [EC:2.4.1.-]; [PTHR12413] DOLICHYL GLYCOSYLTRANSFERASE; [PF03155] ALG6, ALG8 glycosyltransferase family; [GO:0005789] endoplasmic reticulum membrane; [2.4.1.-] Hexosyltransferases.60.600.6533
40 Mapoly0013s0005 [PF11566] PI31 proteasome regulator N-terminal; [KOG4761] Proteasome formation inhibitor PI31; [K06700] proteasome inhibitor subunit 1 (PI31); [PTHR13266] PROTEASOME INHIBITOR62.210.6403
41 Mapoly0051s0053 [PF14774] FAM177 family62.830.6388
42 Mapoly0055s0100 -70.360.6374
43 Mapoly0080s0074 -71.750.6545
44 Mapoly0141s0030 [PTHR23139] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [KOG0130] RNA-binding protein RBM8/Tsunagi (RRM superfamily); [K12876] RNA-binding protein 8A; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)72.100.6045
45 Mapoly0004s0117 [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [PF12780] P-loop containing dynein motor region D4; [GO:0005524] ATP binding; [K10408] dynein heavy chain, axonemal; [PF12775] P-loop containing dynein motor region D3; [GO:0030286] dynein complex; [PTHR10676:SF183] SUBFAMILY NOT NAMED; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF08385] Dynein heavy chain, N-terminal region 1; [PF03028] Dynein heavy chain and region D6 of dynein motor; [PF07728] AAA domain (dynein-related subfamily); [GO:0016887] ATPase activity; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF08393] Dynein heavy chain, N-terminal region 2; [PF12781] ATP-binding dynein motor region D5; [GO:0003777] microtubule motor activity72.170.6642
46 Mapoly0117s0022 [KOG3467] Histone H4; [GO:0003677] DNA binding; [PTHR10484] HISTONE H4; [K11254] histone H4; [PF00125] Core histone H2A/H2B/H3/H472.430.6332
47 Mapoly0043s0091 [3.5.1.26] N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase.; [GO:0016787] hydrolase activity; [K01444] N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]; [PTHR10188:SF6] N(4)-(BETA-N-ACETYLGLUCOSAMINYL)-L-ASPARAGINASE; [PTHR10188] L-ASPARAGINASE; [PF01112] Asparaginase; [KOG1593] Asparaginase73.480.6574
48 Mapoly0061s0103 [PTHR19288] 4-NITROPHENYLPHOSPHATASE-RELATED; [KOG2882] p-Nitrophenyl phosphatase; [PF13344] Haloacid dehalogenase-like hydrolase; [PF13242] HAD-hyrolase-like74.610.5599
49 Mapoly0008s0204 [PF00364] Biotin-requiring enzyme; [PTHR18866] CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE77.050.6079
50 Mapoly0002s0276 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG1001] Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily; [PF00271] Helicase conserved C-terminal domain78.990.6571
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