Guide Gene

Gene ID
Mapoly0062s0090
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[KOG4172] Predicted E3 ubiquitin ligase; [PF06803] Protein of unknown function (DUF1232); [PTHR22894] UNCHARACTERIZED; [PF13920] Zinc finger, C3HC4 type (RING finger)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0062s0090 [KOG4172] Predicted E3 ubiquitin ligase; [PF06803] Protein of unknown function (DUF1232); [PTHR22894] UNCHARACTERIZED; [PF13920] Zinc finger, C3HC4 type (RING finger) 0.00 1.0000
1 Mapoly0005s0018 [KOG4508] Uncharacterized conserved protein; [PTHR15975] UNCHARACTERIZED; [PF10155] Uncharacterized conserved protein (DUF2363)1.410.8256
2 Mapoly0104s0041 [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily; [PTHR21576] UNCHARACTERIZED NODULIN-LIKE PROTEIN; [PF06813] Nodulin-like1.730.8222
3 Mapoly0055s0100 -4.470.7734
4 Mapoly0002s0172 [PF13837] Myb/SANT-like DNA-binding domain4.900.7820
5 Mapoly0051s0053 [PF14774] FAM177 family4.900.7633
6 Mapoly0086s0047 [PTHR22691:SF1] VARIABLE FLAGELLAR NUMBER PROTEIN-RELATED; [PTHR22691] YEAST SPT2-RELATED4.900.8098
7 Mapoly0138s0047 -5.660.7764
8 Mapoly0020s0052 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00397] WW domain; [3.6.4.13] RNA helicase.; [GO:0005515] protein binding; [K12823] ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding6.160.8238
9 Mapoly0153s0038 [K08342] autophagy-related protein 4 [EC:3.4.22.-]; [KOG2674] Cysteine protease required for autophagy - Apg4p/Aut2p; [3.4.22.-] Cysteine endopeptidases.; [PTHR22624] APG4 AUTOPHAGY 4-RELATED; [PF03416] Peptidase family C546.320.7440
10 Mapoly0034s0073 [PF02837] Glycosyl hydrolases family 2, sugar binding domain; [PF02836] Glycosyl hydrolases family 2, TIM barrel domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [GO:0033947] mannosylglycoprotein endo-beta-mannosidase activity; [PF00703] Glycosyl hydrolases family 2; [PTHR10066] BETA-GALACTOSIDASE7.140.7759
11 Mapoly0074s0061 -7.350.7989
12 Mapoly0011s0171 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR11801] SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION; [GO:0004871] signal transducer activity; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0007165] signal transduction7.420.8063
13 Mapoly0007s0047 [PF07228] Stage II sporulation protein E (SpoIIE); [KOG1379] Serine/threonine protein phosphatase; [GO:0003824] catalytic activity; [PTHR12320] PROTEIN PHOSPHATASE 2C7.480.7981
14 Mapoly0027s0023 -9.950.7844
15 Mapoly0004s0253 [GO:0016020] membrane; [PTHR10896] GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE (BETA-1,3-GLUCURONYLTRANSFERASE); [PF03360] Glycosyltransferase family 43; [KOG1476] Beta-1,3-glucuronyltransferase B3GAT1/SQV-8; [GO:0015018] galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity10.820.7891
16 Mapoly0105s0008 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H416.120.7607
17 Mapoly0095s0061 [PF02469] Fasciclin domain16.700.7089
18 Mapoly0101s0027 [GO:0005515] protein binding; [PF14555] UBA-like domain; [PF00789] UBX domain; [PF08059] SEP domain; [KOG2086] Protein tyrosine phosphatase SHP1/Cofactor for p97 ATPase-mediated vesicle membrane fusion; [PTHR23333] UBX DOMAIN CONTAINING PROTEIN17.030.7559
19 Mapoly0113s0054 [PF02146] Sir2 family; [GO:0070403] NAD+ binding; [3.5.1.-] In linear amides.; [PTHR11085] CHROMATIN REGULATORY PROTEIN SIR2; [K11415] NAD-dependent deacetylase sirtuin 5 [EC:3.5.1.-]; [KOG2683] Sirtuin 4 and related class II sirtuins (SIR2 family)21.490.7177
20 Mapoly0005s0244 [KOG4536] Predicted membrane protein; [PF10160] Predicted membrane protein; [PTHR15876] FAMILY NOT NAMED21.840.7304
21 Mapoly0010s0195 [KOG4214] Myotrophin and similar proteins; [PTHR24188] ANKYRIN REPEAT PROTEIN; [PF12796] Ankyrin repeats (3 copies)22.050.7755
22 Mapoly0004s0244 -22.650.7564
23 Mapoly0151s0045 [GO:0016020] membrane; [GO:0004222] metalloendopeptidase activity; [GO:0008233] peptidase activity; [K06013] STE24 endopeptidase [EC:3.4.24.84]; [GO:0071586] CAAX-box protein processing; [PF01435] Peptidase family M48; [3.4.24.84] Ste24 endopeptidase.; [PTHR10120] CAAX PRENYL PROTEASE 1; [KOG2719] Metalloprotease; [GO:0006508] proteolysis22.800.7894
24 Mapoly0065s0036 [GO:0005737] cytoplasm; [GO:0017183] peptidyl-diphthamide biosynthetic process from peptidyl-histidine; [PF01866] Putative diphthamide synthesis protein; [PTHR10762:SF2] DIPHTHAMIDE BIOSYNTHESIS PROTEIN 2 (DPH2 HOMOLOG); [PTHR10762] DIPHTHAMIDE BIOSYNTHESIS PROTEIN23.350.6991
25 Mapoly0102s0013 [PTHR12262] UNCHARACTERIZED; [KOG3036] Protein involved in cell differentiation/sexual development; [PF04078] Cell differentiation family, Rcd1-like; [K12606] CCR4-NOT transcription complex subunit 923.370.7095
26 Mapoly0036s0080 [PF07524] Bromodomain associated; [PF10406] Transcription factor TFIID complex subunit 8 C-term; [PTHR23307:SF0] SUBFAMILY NOT NAMED; [PTHR23307] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 8; [KOG2389] Predicted bromodomain transcription factor24.190.7815
27 Mapoly0048s0028 [PF00149] Calcineurin-like phosphoesterase; [PTHR14795] HELICASE RELATED; [GO:0016787] hydrolase activity25.500.7627
28 Mapoly0019s0138 [GO:0030833] regulation of actin filament polymerization; [KOG2826] Actin-related protein Arp2/3 complex, subunit ARPC2; [PF04045] Arp2/3 complex, 34 kD subunit p34-Arc; [GO:0005856] cytoskeleton; [PTHR12058] ARP2/3 COMPLEX 34 KDA SUBUNIT; [K05758] actin related protein 2/3 complex, subunit 225.810.6989
29 Mapoly0032s0048 [KOG2106] Uncharacterized conserved protein, contains HELP and WD40 domains; [GO:0005515] protein binding; [PTHR32215] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat26.270.7781
30 Mapoly0103s0050 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE; [KOG0740] AAA+-type ATPase; [PF04212] MIT (microtubule interacting and transport) domain27.930.7859
31 Mapoly0043s0091 [3.5.1.26] N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase.; [GO:0016787] hydrolase activity; [K01444] N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]; [PTHR10188:SF6] N(4)-(BETA-N-ACETYLGLUCOSAMINYL)-L-ASPARAGINASE; [PTHR10188] L-ASPARAGINASE; [PF01112] Asparaginase; [KOG1593] Asparaginase29.560.7404
32 Mapoly0022s0044 -30.590.7474
33 Mapoly0011s0186 -31.110.7102
34 Mapoly0021s0148 [PF04970] Lecithin retinol acyltransferase; [PTHR13943] HRAS-LIKE SUPPRESSOR - RELATED31.530.7809
35 Mapoly0079s0001 [GO:0006506] GPI anchor biosynthetic process; [K05284] phosphatidylinositol glycan, class M [EC:2.4.1.-]; [GO:0016758] transferase activity, transferring hexosyl groups; [PF05007] Mannosyltransferase (PIG-M); [GO:0016021] integral to membrane; [PTHR12886:SF0] SUBFAMILY NOT NAMED; [KOG3893] Mannosyltransferase; [PTHR12886] PIG-M MANNOSYLTRANSFERASE; [GO:0005789] endoplasmic reticulum membrane; [2.4.1.-] Hexosyltransferases.33.470.7563
36 Mapoly0103s0047 [KOG0427] Ubiquitin conjugating enzyme; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR24067:SF35] UBIQUITIN-CONJUGATING ENZYME E2 W; [K10688] ubiquitin-conjugating enzyme E2 W [EC:6.3.2.19]; [PF00179] Ubiquitin-conjugating enzyme33.590.7402
37 Mapoly0104s0023 [PTHR23354] NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED; [PTHR23354:SF5] NUCLEOLAR PROTEIN-RELATED; [KOG2372] Oxidation resistance protein; [PF07534] TLD34.210.7406
38 Mapoly0013s0005 [PF11566] PI31 proteasome regulator N-terminal; [KOG4761] Proteasome formation inhibitor PI31; [K06700] proteasome inhibitor subunit 1 (PI31); [PTHR13266] PROTEASOME INHIBITOR34.990.7236
39 Mapoly0116s0016 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding35.140.7737
40 Mapoly0024s0083 [PTHR15959:SF0] SUBFAMILY NOT NAMED; [KOG3894] SNARE protein Syntaxin 18/UFE1; [PF10496] SNARE-complex protein Syntaxin-18 N-terminus; [PTHR15959] SYNTAXIN-18; [K08492] syntaxin 1835.210.7541
41 Mapoly0179s0006 -36.030.7268
42 Mapoly0002s0276 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG1001] Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily; [PF00271] Helicase conserved C-terminal domain36.880.7504
43 Mapoly0001s0494 [PF02991] Autophagy protein Atg8 ubiquitin like; [K08341] GABA(A) receptor-associated protein (autophagy-related protein 8); [PTHR10969] MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED; [KOG1654] Microtubule-associated anchor protein involved in autophagy and membrane trafficking39.600.7284
44 Mapoly0105s0006 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0870] DNA polymerase epsilon, subunit D40.980.7204
45 Mapoly0093s0084 [PF12752] SUZ domain; [GO:0003676] nucleic acid binding; [PF01424] R3H domain; [PTHR15672] CAMP-REGULATED PHOSPHOPROTEIN 21 RELATED R3H DOMAIN CONTAINING PROTEIN42.990.7722
46 Mapoly0110s0025 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding43.710.7343
47 Mapoly0053s0037 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [K11366] ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.1.2.15]; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0008270] zinc ion binding; [PTHR24006] FAMILY NOT NAMED; [PTHR24006:SF122] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN; [KOG1867] Ubiquitin-specific protease; [PF02148] Zn-finger in ubiquitin-hydrolases and other protein45.170.7267
48 Mapoly0059s0029 [PTHR12969:SF6] SUBFAMILY NOT NAMED; [PTHR12969] NGD5/OSM-6/IFT52; [KOG3861] Sensory cilia assembly protein46.310.7288
49 Mapoly0053s0006 [GO:0000287] magnesium ion binding; [PTHR24092] FAMILY NOT NAMED; [GO:0005524] ATP binding; [PF12710] haloacid dehalogenase-like hydrolase; [KOG0206] P-type ATPase; [GO:0000166] nucleotide binding; [GO:0015914] phospholipid transport; [GO:0016021] integral to membrane; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [GO:0004012] phospholipid-translocating ATPase activity47.620.7304
50 Mapoly0012s0121 [K11155] diacylglycerol O-acyltransferase 1 [EC:2.3.1.20 2.3.1.75 2.3.1.76]; [2.3.1.75] Long-chain-alcohol O-fatty-acyltransferase.; [KOG0380] Sterol O-acyltransferase/Diacylglycerol O-acyltransferase; [PF03062] MBOAT, membrane-bound O-acyltransferase family; [2.3.1.20] Diacylglycerol O-acyltransferase.; [2.3.1.76] Retinol O-fatty-acyltransferase.; [GO:0008374] O-acyltransferase activity; [PTHR10408] STEROL O-ACYLTRANSFERASE48.280.7261
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