Guide Gene

Gene ID
Mapoly0153s0038
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K08342] autophagy-related protein 4 [EC:3.4.22.-]; [KOG2674] Cysteine protease required for autophagy - Apg4p/Aut2p; [3.4.22.-] Cysteine endopeptidases.; [PTHR22624] APG4 AUTOPHAGY 4-RELATED; [PF03416] Peptidase family C54

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0153s0038 [K08342] autophagy-related protein 4 [EC:3.4.22.-]; [KOG2674] Cysteine protease required for autophagy - Apg4p/Aut2p; [3.4.22.-] Cysteine endopeptidases.; [PTHR22624] APG4 AUTOPHAGY 4-RELATED; [PF03416] Peptidase family C54 0.00 1.0000
1 Mapoly0062s0090 [KOG4172] Predicted E3 ubiquitin ligase; [PF06803] Protein of unknown function (DUF1232); [PTHR22894] UNCHARACTERIZED; [PF13920] Zinc finger, C3HC4 type (RING finger)6.320.7440
2 Mapoly0003s0275 [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0046872] metal ion binding; [PTHR10825] RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT10.950.7302
3 Mapoly0104s0023 [PTHR23354] NUCLEOLAR PROTEIN 7/ESTROGEN RECEPTOR COACTIVATOR-RELATED; [PTHR23354:SF5] NUCLEOLAR PROTEIN-RELATED; [KOG2372] Oxidation resistance protein; [PF07534] TLD10.950.7246
4 Mapoly0050s0018 [PTHR14467] ARV1; [KOG3134] Predicted membrane protein; [PF04161] Arv1-like family11.660.6856
5 Mapoly0009s0210 [GO:0036158] outer dynein arm assembly; [PTHR21694] UNCHARACTERIZED; [GO:0036157] outer dynein arm14.830.7215
6 Mapoly0011s0171 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR11801] SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION; [GO:0004871] signal transducer activity; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0007165] signal transduction17.230.7253
7 Mapoly0113s0003 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG1407] WD40 repeat protein; [PF00400] WD domain, G-beta repeat20.930.6280
8 Mapoly0055s0101 [KOG3298] DNA-directed RNA polymerase subunit E'; [PF03876] SHS2 domain found in N terminus of Rpb7p/Rpc25p/MJ0397; [PTHR12709:SF3] RNA POLYMERASE RPB7, N-TERMINAL DOMAIN CONTAINING PROTEIN; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR12709] DNA-DIRECTED RNA POLYMERASE II, III21.330.7000
9 Mapoly0004s0142 [GO:0008270] zinc ion binding; [PF01529] DHHC palmitoyltransferase; [KOG1312] DHHC-type Zn-finger proteins; [PTHR22883] ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN21.540.6978
10 Mapoly0105s0006 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0870] DNA polymerase epsilon, subunit D21.680.6961
11 Mapoly0090s0065 [PF08123] Histone methylation protein DOT1; [GO:0018024] histone-lysine N-methyltransferase activity23.560.6918
12 Mapoly0002s0172 [PF13837] Myb/SANT-like DNA-binding domain24.000.6966
13 Mapoly0055s0100 -26.940.6780
14 Mapoly0014s0114 [KOG2061] Uncharacterized MYND Zn-finger protein; [PF04194] Programmed cell death protein 2, C-terminal putative domain; [GO:0005737] cytoplasm; [PTHR12298] PCDC2 (PROGRAMMED CELL DEATH PROTEIN 2)-RELATED32.250.6886
15 Mapoly0043s0091 [3.5.1.26] N(4)-(beta-N-acetylglucosaminyl)-L-asparaginase.; [GO:0016787] hydrolase activity; [K01444] N4-(beta-N-acetylglucosaminyl)-L-asparaginase [EC:3.5.1.26]; [PTHR10188:SF6] N(4)-(BETA-N-ACETYLGLUCOSAMINYL)-L-ASPARAGINASE; [PTHR10188] L-ASPARAGINASE; [PF01112] Asparaginase; [KOG1593] Asparaginase34.390.6940
16 Mapoly0005s0175 [GO:0005515] protein binding; [KOG0293] WD40 repeat-containing protein; [PTHR22838] WD REPEAT PROTEIN 26-RELATED; [PF00400] WD domain, G-beta repeat; [PTHR22838:SF0] SUBFAMILY NOT NAMED34.990.6942
17 Mapoly0116s0016 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding35.580.7082
18 Mapoly0036s0115 [PTHR23326:SF1] CCR4 NOT-RELATED; [GO:0006355] regulation of transcription, DNA-dependent; [PF04153] NOT2 / NOT3 / NOT5 family; [GO:0005634] nucleus; [PTHR23326] CCR4 NOT-RELATED; [KOG2150] CCR4-NOT transcriptional regulation complex, NOT5 subunit; [PF04065] Not1 N-terminal domain, CCR4-Not complex component37.700.6434
19 Mapoly0048s0108 -38.410.6375
20 Mapoly0005s0244 [KOG4536] Predicted membrane protein; [PF10160] Predicted membrane protein; [PTHR15876] FAMILY NOT NAMED39.800.6680
21 Mapoly0045s0122 [PTHR16039] FAMILY NOT NAMED; [PF15003] HAUS augmin-like complex subunit 2; [GO:0051225] spindle assembly; [GO:0031023] microtubule organizing center organization39.840.6297
22 Mapoly0164s0007 [GO:0005515] protein binding; [PF00789] UBX domain; [KOG2507] Ubiquitin regulatory protein UBXD2, contains UAS and UBX domains; [PTHR13020] UBIQUITIN-ASSOCIATED UBA/UBX DOMAIN-CONTAINING42.130.6659
23 Mapoly0030s0066 [PTHR31469] FAMILY NOT NAMED42.430.6844
24 Mapoly0079s0033 -43.870.6410
25 Mapoly0019s0071 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain47.180.6928
26 Mapoly0002s0148 [PF04109] Autophagy protein Apg9; [PTHR13038:SF10] AUTOPHAGY PROTEIN 9; [KOG2173] Integral membrane protein; [PTHR13038] APG9 AUTOPHAGY 947.290.6422
27 Mapoly0031s0146 [PTHR10332] EQUILIBRATIVE NUCLEOSIDE TRANSPORTER; [GO:0016021] integral to membrane; [PF01733] Nucleoside transporter; [PTHR10332:SF10] NUCLEOSIDE TRANSPORTER FAMILY PROTEIN; [GO:0006810] transport; [GO:0005337] nucleoside transmembrane transporter activity; [KOG1479] Nucleoside transporter49.640.5821
28 Mapoly0019s0033 [GO:0005097] Rab GTPase activator activity; [PTHR22957:SF94] TBC DOMAIN CONTAINING PROTEIN; [KOG1102] Rab6 GTPase activator GAPCenA and related TBC domain proteins; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain49.860.6943
29 Mapoly0175s0008 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG3085] Predicted hydrolase (HAD superfamily); [PF13242] HAD-hyrolase-like53.580.6223
30 Mapoly0032s0050 [PF12780] P-loop containing dynein motor region D4; [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [GO:0005524] ATP binding; [K10408] dynein heavy chain, axonemal; [PTHR10676:SF137] DYNEIN HEAVY CHAIN 1, AXONEMAL-RELATED; [PF12775] P-loop containing dynein motor region D3; [GO:0005858] axonemal dynein complex; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [PF07728] AAA domain (dynein-related subfamily); [GO:0016887] ATPase activity; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF12781] ATP-binding dynein motor region D5; [PF08393] Dynein heavy chain, N-terminal region 2; [GO:0003341] cilium movement; [GO:0003777] microtubule motor activity61.810.6828
31 Mapoly0005s0096 [GO:0006506] GPI anchor biosynthetic process; [PTHR15095] PHOSPHATIDYLINOSITOL-GLYCAN BIOSYNTHESIS, CLASS F; [GO:0016021] integral to membrane; [PF06699] GPI biosynthesis protein family Pig-F; [GO:0005789] endoplasmic reticulum membrane62.740.6518
32 Mapoly0032s0117 [PF06294] Domain of Unknown Function (DUF1042); [PTHR12509] SPERMATOGENESIS-ASSOCIATED 4-RELATED63.170.6817
33 Mapoly0020s0002 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0204] Calcium transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [PF00689] Cation transporting ATPase, C-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase63.210.6642
34 Mapoly0034s0073 [PF02837] Glycosyl hydrolases family 2, sugar binding domain; [PF02836] Glycosyl hydrolases family 2, TIM barrel domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [GO:0033947] mannosylglycoprotein endo-beta-mannosidase activity; [PF00703] Glycosyl hydrolases family 2; [PTHR10066] BETA-GALACTOSIDASE64.600.6547
35 Mapoly0115s0002 -65.250.6578
36 Mapoly0022s0044 -67.880.6580
37 Mapoly0105s0056 [GO:0003676] nucleic acid binding; [PTHR24622] FAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)67.900.6603
38 Mapoly0051s0007 [PF06047] Ras-induced vulval development antagonist; [KOG2812] Uncharacterized conserved protein; [PTHR13087] NF-KAPPA B ACTIVATING PROTEIN71.480.5951
39 Mapoly0035s0056 [KOG3374] Cellular repressor of transcription; [PTHR13343] CREG1 PROTEIN; [PF13883] Pyridoxamine 5'-phosphate oxidase72.000.5959
40 Mapoly0074s0057 [GO:0016020] membrane; [KOG3810] Micronutrient transporters (folate transporter family); [PF01770] Reduced folate carrier; [PTHR10686] FOLATE TRANSPORTER; [GO:0006810] transport72.730.6070
41 Mapoly0036s0027 [PF03134] TB2/DP1, HVA22 family; [PTHR12300:SF20] HVA22-LIKE PROTEIN; [KOG1726] HVA22/DP1 gene product-related proteins; [PTHR12300] HVA22-LIKE PROTEINS73.890.6100
42 Mapoly0027s0044 [KOG2110] Uncharacterized conserved protein, contains WD40 repeats; [PTHR11227] WD-REPEAT PROTEIN INTERACTING WITH PHOSPHOINOSIDES (WIPI)-RELATED; [GO:0005515] protein binding; [PTHR11227:SF17] WIPI-1,2; [PF00400] WD domain, G-beta repeat78.450.6570
43 Mapoly0037s0099 [PF13837] Myb/SANT-like DNA-binding domain79.320.6651
44 Mapoly0042s0045 [PTHR21139] TRIOSEPHOSPHATE ISOMERASE; [PTHR21139:SF1] TRIOSEPHOSPHATE ISOMERASE; [KOG1643] Triosephosphate isomerase; [5.3.1.1] Triose-phosphate isomerase.; [GO:0008152] metabolic process; [GO:0004807] triose-phosphate isomerase activity; [PF00121] Triosephosphate isomerase; [K01803] triosephosphate isomerase (TIM) [EC:5.3.1.1]81.550.6567
45 Mapoly0002s0154 -82.700.6561
46 Mapoly0061s0121 [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22764] RING FINGER DOMAIN-CONTAINING84.910.6230
47 Mapoly0023s0039 [PF00676] Dehydrogenase E1 component; [GO:0055114] oxidation-reduction process; [GO:0006099] tricarboxylic acid cycle; [1.2.4.2] Oxoglutarate dehydrogenase (succinyl-transferring).; [GO:0030976] thiamine pyrophosphate binding; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [K00164] 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]; [GO:0004591] oxoglutarate dehydrogenase (succinyl-transferring) activity; [PTHR23152] 2-OXOGLUTARATE DEHYDROGENASE; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor; [KOG0450] 2-oxoglutarate dehydrogenase, E1 subunit85.900.6581
48 Mapoly0103s0050 [GO:0005524] ATP binding; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE; [KOG0740] AAA+-type ATPase; [PF04212] MIT (microtubule interacting and transport) domain88.800.6836
49 Mapoly0113s0025 [PTHR12957] DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED; [PTHR12957:SF2] DICE1/DEAD/H BOX POLYPEPTIDE; [KOG3768] DEAD box RNA helicase; [K13143] integrator complex subunit 689.980.6724
50 Mapoly0059s0046 -91.650.6432
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