Guide Gene
- Gene ID
- Mapoly0011s0171
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0006355] regulation of transcription, DNA-dependent; [PTHR11801] SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION; [GO:0004871] signal transducer activity; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0007165] signal transduction
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0011s0171 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR11801] SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION; [GO:0004871] signal transducer activity; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0007165] signal transduction 0.00 1.0000 1 Mapoly0116s0016 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding 1.00 0.8778 2 Mapoly0019s0033 [GO:0005097] Rab GTPase activator activity; [PTHR22957:SF94] TBC DOMAIN CONTAINING PROTEIN; [KOG1102] Rab6 GTPase activator GAPCenA and related TBC domain proteins; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain 1.41 0.8742 3 Mapoly0079s0001 [GO:0006506] GPI anchor biosynthetic process; [K05284] phosphatidylinositol glycan, class M [EC:2.4.1.-]; [GO:0016758] transferase activity, transferring hexosyl groups; [PF05007] Mannosyltransferase (PIG-M); [GO:0016021] integral to membrane; [PTHR12886:SF0] SUBFAMILY NOT NAMED; [KOG3893] Mannosyltransferase; [PTHR12886] PIG-M MANNOSYLTRANSFERASE; [GO:0005789] endoplasmic reticulum membrane; [2.4.1.-] Hexosyltransferases. 3.00 0.8341 4 Mapoly0093s0067 - 3.16 0.8065 5 Mapoly0062s0077 [GO:0016020] membrane; [PF02714] Domain of unknown function DUF221; [PF14703] Domain of unknown function (DUF4463); [PF13967] Late exocytosis, associated with Golgi transport; [KOG1134] Uncharacterized conserved protein; [PTHR13018] PROBABLE MEMBRANE PROTEIN DUF221-RELATED 4.00 0.8311 6 Mapoly0071s0059 - 4.24 0.8180 7 Mapoly0062s0090 [KOG4172] Predicted E3 ubiquitin ligase; [PF06803] Protein of unknown function (DUF1232); [PTHR22894] UNCHARACTERIZED; [PF13920] Zinc finger, C3HC4 type (RING finger) 7.42 0.8063 8 Mapoly0036s0127 [GO:0008168] methyltransferase activity; [PTHR12829] N6-ADENOSINE-METHYLTRANSFERASE; [PF05063] MT-A70; [GO:0006139] nucleobase-containing compound metabolic process 8.66 0.8252 9 Mapoly0004s0253 [GO:0016020] membrane; [PTHR10896] GALACTOSYLGALACTOSYLXYLOSYLPROTEIN 3-BETA-GLUCURONOSYLTRANSFERASE (BETA-1,3-GLUCURONYLTRANSFERASE); [PF03360] Glycosyltransferase family 43; [KOG1476] Beta-1,3-glucuronyltransferase B3GAT1/SQV-8; [GO:0015018] galactosylgalactosylxylosylprotein 3-beta-glucuronosyltransferase activity 9.54 0.8037 10 Mapoly0097s0085 [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED 9.80 0.8045 11 Mapoly0053s0037 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [K11366] ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.1.2.15]; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0008270] zinc ion binding; [PTHR24006] FAMILY NOT NAMED; [PTHR24006:SF122] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN; [KOG1867] Ubiquitin-specific protease; [PF02148] Zn-finger in ubiquitin-hydrolases and other protein 10.10 0.7965 12 Mapoly0073s0017 [PF05641] Agenet domain; [PF01426] BAH domain; [GO:0003682] chromatin binding; [PTHR31917] FAMILY NOT NAMED 10.91 0.8166 13 Mapoly0023s0039 [PF00676] Dehydrogenase E1 component; [GO:0055114] oxidation-reduction process; [GO:0006099] tricarboxylic acid cycle; [1.2.4.2] Oxoglutarate dehydrogenase (succinyl-transferring).; [GO:0030976] thiamine pyrophosphate binding; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [K00164] 2-oxoglutarate dehydrogenase E1 component [EC:1.2.4.2]; [GO:0004591] oxoglutarate dehydrogenase (succinyl-transferring) activity; [PTHR23152] 2-OXOGLUTARATE DEHYDROGENASE; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor; [KOG0450] 2-oxoglutarate dehydrogenase, E1 subunit 11.53 0.7928 14 Mapoly0059s0046 - 12.12 0.7908 15 Mapoly0034s0073 [PF02837] Glycosyl hydrolases family 2, sugar binding domain; [PF02836] Glycosyl hydrolases family 2, TIM barrel domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [GO:0033947] mannosylglycoprotein endo-beta-mannosidase activity; [PF00703] Glycosyl hydrolases family 2; [PTHR10066] BETA-GALACTOSIDASE 12.17 0.7726 16 Mapoly0020s0052 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PF00397] WW domain; [3.6.4.13] RNA helicase.; [GO:0005515] protein binding; [K12823] ATP-dependent RNA helicase DDX5/DBP2 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 15.75 0.8081 17 Mapoly0153s0038 [K08342] autophagy-related protein 4 [EC:3.4.22.-]; [KOG2674] Cysteine protease required for autophagy - Apg4p/Aut2p; [3.4.22.-] Cysteine endopeptidases.; [PTHR22624] APG4 AUTOPHAGY 4-RELATED; [PF03416] Peptidase family C54 17.23 0.7253 18 Mapoly0042s0089 [PTHR19265] MEIOSIS-SPECIFIC NUCLEAR STRUCTURAL PROTEIN 1; [PF13868] Tumour suppressor, Mitostatin; [PTHR19265:SF0] SUBFAMILY NOT NAMED 17.83 0.7233 19 Mapoly0054s0027 [GO:0006338] chromatin remodeling; [PF04795] PAPA-1-like conserved region; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0031011] Ino80 complex; [PTHR21561] FAMILY NOT NAMED; [PF04438] HIT zinc finger 17.89 0.7984 20 Mapoly0097s0018 [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING 18.97 0.7760 21 Mapoly0027s0023 - 19.29 0.7824 22 Mapoly0032s0042 [GO:0051297] centrosome organization; [PF14661] HAUS augmin-like complex subunit 6 N-terminus; [PTHR16151] UNCHARACTERIZED; [GO:0051225] spindle assembly; [GO:0070652] HAUS complex 19.34 0.7907 23 Mapoly0005s0285 [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0006511] ubiquitin-dependent protein catabolic process; [KOG1865] Ubiquitin carboxyl-terminal hydrolase; [PTHR24006] FAMILY NOT NAMED 19.90 0.7811 24 Mapoly0002s0172 [PF13837] Myb/SANT-like DNA-binding domain 22.14 0.7574 25 Mapoly0086s0047 [PTHR22691:SF1] VARIABLE FLAGELLAR NUMBER PROTEIN-RELATED; [PTHR22691] YEAST SPT2-RELATED 22.14 0.7781 26 Mapoly0032s0048 [KOG2106] Uncharacterized conserved protein, contains HELP and WD40 domains; [GO:0005515] protein binding; [PTHR32215] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat 22.80 0.7909 27 Mapoly0016s0151 [PTHR23177] MKIAA1688 PROTEIN; [GO:0007165] signal transduction; [PF00786] P21-Rho-binding domain; [PF00620] RhoGAP domain 23.15 0.7446 28 Mapoly0020s0005 [PTHR10357] ALPHA-AMYLASE; [GO:0004556] alpha-amylase activity; [K01176] alpha-amylase [EC:3.2.1.1]; [GO:0005975] carbohydrate metabolic process; [PF07821] Alpha-amylase C-terminal beta-sheet domain; [KOG0471] Alpha-amylase; [GO:0003824] catalytic activity; [GO:0043169] cation binding; [GO:0005509] calcium ion binding; [3.2.1.1] Alpha-amylase.; [PF00128] Alpha amylase, catalytic domain 23.75 0.7601 29 Mapoly0019s0071 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain 25.30 0.7816 30 Mapoly0020s0141 [PTHR10343] 5'-AMP-ACTIVATED PROTEIN KINASE , BETA SUBUNIT 26.19 0.8021 31 Mapoly0023s0055 - 27.95 0.7433 32 Mapoly0095s0042 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PTHR24362] SERINE/THREONINE-PROTEIN KINASE NEK; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation 27.96 0.7630 33 Mapoly0001s0212 [PTHR23084] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED; [PF02493] MORN repeat 30.59 0.7879 34 Mapoly0202s0013 [PF12937] F-box-like; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG4341] F-box protein containing LRR 31.46 0.8070 35 Mapoly0070s0024 - 31.75 0.7125 36 Mapoly0105s0006 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0870] DNA polymerase epsilon, subunit D 32.17 0.7438 37 Mapoly0001s0203 [GO:0016773] phosphotransferase activity, alcohol group as acceptor; [GO:0005515] protein binding; [KOG2381] Phosphatidylinositol 4-kinase; [PF00454] Phosphatidylinositol 3- and 4-kinase; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN 33.05 0.7865 38 Mapoly0002s0276 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG1001] Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily; [PF00271] Helicase conserved C-terminal domain 33.05 0.7665 39 Mapoly0005s0143 [PTHR22880] FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS; [GO:0005515] protein binding; [PF00439] Bromodomain 33.94 0.7885 40 Mapoly0105s0037 - 33.94 0.7425 41 Mapoly0003s0275 [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0046872] metal ion binding; [PTHR10825] RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT 35.71 0.7564 42 Mapoly0129s0017 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [KOG1718] Dual specificity phosphatase; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity 36.00 0.7874 43 Mapoly0009s0210 [GO:0036158] outer dynein arm assembly; [PTHR21694] UNCHARACTERIZED; [GO:0036157] outer dynein arm 36.08 0.7498 44 Mapoly0096s0021 [GO:0030130] clathrin coat of trans-Golgi network vesicle; [KOG4031] Vesicle coat protein clathrin, light chain; [GO:0016192] vesicle-mediated transport; [PTHR10639] CLATHRIN LIGHT CHAIN; [PF01086] Clathrin light chain; [GO:0006886] intracellular protein transport; [GO:0030132] clathrin coat of coated pit; [GO:0005198] structural molecule activity 36.18 0.7382 45 Mapoly0052s0105 - 38.07 0.6847 46 Mapoly0054s0108 [PF13207] AAA domain 38.73 0.7882 47 Mapoly0019s0040 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR13301] X-BOX TRANSCRIPTION FACTOR-RELATED; [PF00170] bZIP transcription factor 39.69 0.7993 48 Mapoly0168s0008 [PTHR24011:SF139] SUBFAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 39.84 0.7890 49 Mapoly0113s0025 [PTHR12957] DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED; [PTHR12957:SF2] DICE1/DEAD/H BOX POLYPEPTIDE; [KOG3768] DEAD box RNA helicase; [K13143] integrator complex subunit 6 39.87 0.7831 50 Mapoly0030s0066 [PTHR31469] FAMILY NOT NAMED 41.35 0.7527