Guide Gene
- Gene ID
- Mapoly0054s0027
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0006338] chromatin remodeling; [PF04795] PAPA-1-like conserved region; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0031011] Ino80 complex; [PTHR21561] FAMILY NOT NAMED; [PF04438] HIT zinc finger
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0054s0027 [GO:0006338] chromatin remodeling; [PF04795] PAPA-1-like conserved region; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0031011] Ino80 complex; [PTHR21561] FAMILY NOT NAMED; [PF04438] HIT zinc finger 0.00 1.0000 1 Mapoly0043s0041 [PTHR21737] POLYGLUTAMINE BINDING PROTEIN 1/MARVEL (MEMBRANE-ASSOCIATING) DOMAIN CONTAINING 3; [K12865] polyglutamine-binding protein 1; [PF00397] WW domain; [GO:0005515] protein binding; [PTHR21737:SF3] POLYGLUTAMINE BINDING PROTEIN 1 4.00 0.8526 2 Mapoly0113s0025 [PTHR12957] DEAD/H BOX POLYPEPTIDE 26/DICE1-RELATED; [PTHR12957:SF2] DICE1/DEAD/H BOX POLYPEPTIDE; [KOG3768] DEAD box RNA helicase; [K13143] integrator complex subunit 6 4.24 0.8344 3 Mapoly0053s0037 [3.1.2.15] Ubiquitin thiolesterase.; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [K11366] ubiquitin carboxyl-terminal hydrolase 22/27/51 [EC:3.1.2.15]; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0008270] zinc ion binding; [PTHR24006] FAMILY NOT NAMED; [PTHR24006:SF122] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE FAMILY PROTEIN; [KOG1867] Ubiquitin-specific protease; [PF02148] Zn-finger in ubiquitin-hydrolases and other protein 4.69 0.8137 4 Mapoly0055s0059 [GO:0000124] SAGA complex; [GO:0003712] transcription cofactor activity; [PF12090] Spt20 family; [PTHR13526] P38 INTERACTING PROTEIN 5.48 0.8542 5 Mapoly0005s0285 [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0006511] ubiquitin-dependent protein catabolic process; [KOG1865] Ubiquitin carboxyl-terminal hydrolase; [PTHR24006] FAMILY NOT NAMED 6.24 0.8106 6 Mapoly0006s0156 - 7.75 0.7904 7 Mapoly0116s0016 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding 8.00 0.8258 8 Mapoly0124s0009 - 8.54 0.7553 9 Mapoly0148s0013 [PTHR12864] RAN BINDING PROTEIN 9-RELATED; [PF10607] CTLH/CRA C-terminal to LisH motif domain; [KOG2659] LisH motif-containing protein 8.66 0.8253 10 Mapoly0047s0124 [GO:0016042] lipid catabolic process; [PTHR21493] CGI-141-RELATED/LIPASE CONTAINING PROTEIN; [PF01764] Lipase (class 3); [KOG2088] Predicted lipase/calmodulin-binding heat-shock protein; [PF03893] Lipase 3 N-terminal region; [GO:0006629] lipid metabolic process 10.49 0.8151 11 Mapoly0139s0023 - 12.12 0.7748 12 Mapoly0043s0141 [PTHR13366] MALARIA ANTIGEN-RELATED; [KOG4535] HEAT and armadillo repeat-containing protein; [PF13251] Domain of unknown function (DUF4042); [PF13646] HEAT repeats 12.49 0.7520 13 Mapoly0137s0026 [GO:0005515] protein binding; [PTHR14885] UNCHARACTERIZED; [PF00400] WD domain, G-beta repeat 14.14 0.7737 14 Mapoly0001s0212 [PTHR23084] PHOSPHATIDYLINOSITOL-4-PHOSPHATE 5-KINASE RELATED; [PF02493] MORN repeat 14.28 0.8106 15 Mapoly0012s0107 [K13168] splicing factor, arginine/serine-rich 16; [PTHR13161:SF4] SPLICING FACTOR, ARGININE/SERINE-RICH 16; [KOG2548] SWAP mRNA splicing regulator; [PTHR13161] SPLICING FACTOR (SUPPRESSOR OF WHITE APRICOT); [PF09750] Alternative splicing regulator 15.43 0.8192 16 Mapoly0007s0058 [PF12796] Ankyrin repeats (3 copies) 15.62 0.7596 17 Mapoly0011s0171 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR11801] SIGNAL TRANSDUCER AND ACTIVATOR OF TRANSCRIPTION; [GO:0004871] signal transducer activity; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0007165] signal transduction 17.89 0.7984 18 Mapoly0003s0275 [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0046872] metal ion binding; [PTHR10825] RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT 20.00 0.7804 19 Mapoly0097s0018 [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR23315] BETA CATENIN-RELATED ARMADILLO REPEAT-CONTAINING 20.12 0.7793 20 Mapoly0032s0156 [PF14652] Domain of unknown function (DUF4457); [PTHR21534] UNCHARACTERIZED; [PTHR21534:SF0] SUBFAMILY NOT NAMED 20.45 0.7998 21 Mapoly0105s0003 [GO:0005524] ATP binding; [K08827] serine/threonine-protein kinase PRP4 [EC:2.7.11.1]; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [KOG0670] U4/U6-associated splicing factor PRP4; [PTHR24056:SF45] SERINE/THREONINE-PROTEIN KINASE PRP4 HOMOLOG; [PTHR24056] CELL DIVISION PROTEIN KINASE 20.49 0.7913 22 Mapoly0097s0085 [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED 20.78 0.7915 23 Mapoly0007s0209 [PF15275] PEHE domain; [GO:0005515] protein binding; [PF00439] Bromodomain; [PTHR22881] BROMODOMAIN CONTAINING PROTEIN 20.98 0.8186 24 Mapoly0009s0210 [GO:0036158] outer dynein arm assembly; [PTHR21694] UNCHARACTERIZED; [GO:0036157] outer dynein arm 21.42 0.7735 25 Mapoly0047s0135 [PTHR31133] FAMILY NOT NAMED 21.56 0.7110 26 Mapoly0202s0013 [PF12937] F-box-like; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG4341] F-box protein containing LRR 21.63 0.8249 27 Mapoly0006s0210 [GO:0008408] 3'-5' exonuclease activity; [PF01612] 3'-5' exonuclease; [GO:0005622] intracellular; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [PTHR12124] POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; [PF00570] HRDC domain 23.24 0.7611 28 Mapoly0022s0152 [GO:0005515] protein binding; [PTHR32215] FAMILY NOT NAMED; [PF00400] WD domain, G-beta repeat 23.75 0.7159 29 Mapoly0059s0106 [GO:0003677] DNA binding; [PF12937] F-box-like; [GO:0005524] ATP binding; [GO:0005515] protein binding; [GO:0008270] zinc ion binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [KOG1001] Helicase-like transcription factor HLTF/DNA helicase RAD5, DEAD-box superfamily; [PF07496] CW-type Zinc Finger 24.04 0.8075 30 Mapoly0052s0017 - 24.49 0.7924 31 Mapoly0004s0049 [PF13414] TPR repeat; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [KOG0550] Molecular chaperone (DnaJ superfamily) 25.46 0.8183 32 Mapoly0085s0079 [PF01426] BAH domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR 28.57 0.8076 33 Mapoly0002s0172 [PF13837] Myb/SANT-like DNA-binding domain 30.00 0.7549 34 Mapoly0065s0067 [PTHR13165] ARSENITE-RESISTANCE PROTEIN 2; [PF12066] Domain of unknown function (DUF3546); [PF04959] Arsenite-resistance protein 2; [KOG2295] C2H2 Zn-finger protein; [PTHR13165:SF0] SUBFAMILY NOT NAMED 30.30 0.7882 35 Mapoly0002s0268 [PF07719] Tetratricopeptide repeat; [KOG1127] TPR repeat-containing protein; [PTHR15704] SUPERKILLER 3 PROTEIN-RELATED; [GO:0005515] protein binding; [K12600] superkiller protein 3; [PF13414] TPR repeat; [PF13181] Tetratricopeptide repeat; [PF13174] Tetratricopeptide repeat; [PF00515] Tetratricopeptide repeat 30.74 0.8080 36 Mapoly0179s0012 [GO:0016020] membrane; [PF00571] CBS domain; [GO:0006821] chloride transport; [PF00654] Voltage gated chloride channel; [GO:0055085] transmembrane transport; [GO:0005247] voltage-gated chloride channel activity; [GO:0030554] adenyl nucleotide binding; [PTHR11689] CHLORIDE CHANNEL 30.98 0.7947 37 Mapoly0019s0088 [GO:0006506] GPI anchor biosynthetic process; [GO:0016021] integral to membrane; [GO:0017176] phosphatidylinositol N-acetylglucosaminyltransferase activity; [PF05024] N-acetylglucosaminyl transferase component (Gpi1); [PTHR21329] PHOSPHATIDYLINOSITOL N-ACETYLGLUCOSAMINYLTRANSFERASE SUBUNIT Q-RELATED 31.11 0.7282 38 Mapoly0036s0127 [GO:0008168] methyltransferase activity; [PTHR12829] N6-ADENOSINE-METHYLTRANSFERASE; [PF05063] MT-A70; [GO:0006139] nucleobase-containing compound metabolic process 33.00 0.7883 39 Mapoly0048s0088 [PF00397] WW domain; [GO:0005515] protein binding; [K12824] transcription elongation regulator 1; [PTHR15377:SF3] SUBFAMILY NOT NAMED; [PTHR15377] TRANSCRIPTION FACTOR CA150B RELATEDTCERG1; [PF01846] FF domain; [KOG0155] Transcription factor CA150 33.91 0.7947 40 Mapoly0057s0101 [PF14792] DNA polymerase beta palm; [GO:0003677] DNA binding; [K03512] DNA polymerase lambda subunit [EC:2.7.7.7 4.2.99.-]; [KOG2534] DNA polymerase IV (family X); [PF14791] DNA polymerase beta thumb; [2.7.7.7] DNA-directed DNA polymerase.; [GO:0005634] nucleus; [4.2.99.-] Other carbon-oxygen lyases.; [GO:0034061] DNA polymerase activity; [PTHR11276] DNA POLYMERASE TYPE-X FAMILY MEMBER; [PTHR11276:SF1] DNA POLYMERASE TYPE-X FAMILY MEMBER; [PF14716] Helix-hairpin-helix domain; [PF10391] Fingers domain of DNA polymerase lambda 34.50 0.6859 41 Mapoly0006s0082 [PF00097] Zinc finger, C3HC4 type (RING finger); [PTHR12983] FAMILY NOT NAMED; [GO:0046872] metal ion binding 34.87 0.7538 42 Mapoly0001s0024 [GO:0005634] nucleus; [GO:0003677] DNA binding; [KOG2402] Paf1/RNA polymerase II complex, RTF1 component (involved in regulation of TATA box-binding protein); [GO:0006352] DNA-dependent transcription, initiation; [GO:0016570] histone modification; [PTHR13115:SF8] SUBFAMILY NOT NAMED; [PF03126] Plus-3 domain; [PTHR13115] UNCHARACTERIZED 34.90 0.7799 43 Mapoly0011s0122 [PF13912] C2H2-type zinc finger 35.24 0.7176 44 Mapoly0094s0022 - 36.18 0.7533 45 Mapoly0005s0143 [PTHR22880] FALZ-RELATED BROMODOMAIN-CONTAINING PROTEINS; [GO:0005515] protein binding; [PF00439] Bromodomain 36.51 0.7900 46 Mapoly0177s0019 [KOG0149] Predicted RNA-binding protein SEB4 (RRM superfamily); [PF01480] PWI domain; [PTHR23365] POLY-A BINDING PROTEIN 2; [GO:0006397] mRNA processing; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 37.04 0.8102 47 Mapoly0028s0019 [K07359] calcium/calmodulin-dependent protein kinase kinase [EC:2.7.11.17]; [GO:0005524] ATP binding; [PTHR24347] SERINE/THREONINE-PROTEIN KINASE; [PF00069] Protein kinase domain; [PTHR24347:SF1] CALCIUM/CALMODULIN DEPENDENT PROTEIN KINASE KINASE 1; [2.7.11.17] Calcium/calmodulin-dependent protein kinase.; [GO:0004672] protein kinase activity; [KOG0616] cAMP-dependent protein kinase catalytic subunit (PKA); [GO:0006468] protein phosphorylation 37.47 0.7711 48 Mapoly0019s0033 [GO:0005097] Rab GTPase activator activity; [PTHR22957:SF94] TBC DOMAIN CONTAINING PROTEIN; [KOG1102] Rab6 GTPase activator GAPCenA and related TBC domain proteins; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain 39.55 0.7792 49 Mapoly0045s0050 [KOG1881] Anion exchanger adaptor protein Kanadaptin, contains FHA domain; [GO:0005515] protein binding; [PTHR23308:SF2] SMAD NUCLEAR INTERACTING PROTEIN 1; [PF00498] FHA domain; [PTHR23308] NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-1 40.40 0.7194 50 Mapoly0075s0016 [PTHR15830] FAMILY NOT NAMED; [PF10193] Telomere length regulation protein 41.13 0.7437