Guide Gene

Gene ID
Mapoly0034s0066
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005840] ribosome; [PTHR21349] 50S RIBOSOMAL PROTEIN L21; [KOG1686] Mitochondrial/chloroplast ribosomal L21 protein; [PF00829] Ribosomal prokaryotic L21 protein

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0034s0066 [GO:0005840] ribosome; [PTHR21349] 50S RIBOSOMAL PROTEIN L21; [KOG1686] Mitochondrial/chloroplast ribosomal L21 protein; [PF00829] Ribosomal prokaryotic L21 protein 0.00 1.0000
1 Mapoly0014s0186 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3090] Prohibitin-like protein; [PF01145] SPFH domain / Band 7 family1.730.8474
2 Mapoly0176s0003 [PTHR19359] CYTOCHROME B5; [PTHR19359:SF10] CYTOCHROME B5 MITOCHONDRIAL; [GO:0020037] heme binding; [PF00173] Cytochrome b5-like Heme/Steroid binding domain3.460.7393
3 Mapoly0032s0009 [PTHR21338] MITOCHONDRIAL RIBOSOMAL PROTEIN L41; [PF09809] Mitochondrial ribosomal protein L273.870.7722
4 Mapoly0061s0086 -4.470.7646
5 Mapoly0128s0026 [GO:0005840] ribosome; [K02961] small subunit ribosomal protein S17; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG1740] Predicted mitochondrial/chloroplast ribosomal protein S17; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER4.470.7897
6 Mapoly0023s0159 [PTHR13126] CHAPERONE ATP11; [KOG3281] Mitochondrial F1-ATPase assembly protein; [GO:0005739] mitochondrion; [PF06644] ATP11 protein; [GO:0006461] protein complex assembly; [K07555] ATP synthase mitochondrial F1 complex assembly factor 15.100.7391
7 Mapoly0072s0022 [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [PTHR11741] ELONGATION FACTOR TS; [GO:0005622] intracellular; [PF00889] Elongation factor TS; [KOG1071] Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt6.320.7481
8 Mapoly0001s0479 [GO:0005759] mitochondrial matrix; [KOG2536] MAM33, mitochondrial matrix glycoprotein; [PTHR10826] COMPLEMENT COMPONENT 1; [PF02330] Mitochondrial glycoprotein6.480.7621
9 Mapoly0094s0023 [PTHR13582] M-PHASE PHOSPHOPROTEIN 6; [PF10175] M-phase phosphoprotein 67.140.7299
10 Mapoly0112s0013 [PTHR11210] RING BOX; [KOG2930] SCF ubiquitin ligase, Rbx1 component; [PTHR11210:SF20] APC11 (ANAPHASE-PROMOTING COMPLEX/CYCLOSOME 11), PROTEIN BINDING / ZINC ION BIN; [GO:0008270] zinc ion binding; [K03868] RING-box protein 1; [PF12678] RING-H2 zinc finger7.420.7449
11 Mapoly0108s0056 -7.480.7530
12 Mapoly0040s0040 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3083] Prohibitin; [PF01145] SPFH domain / Band 7 family9.380.7684
13 Mapoly0002s0206 [PF10213] Mitochondrial ribosomal subunit protein; [PTHR13490] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S2810.950.7340
14 Mapoly0108s0055 [GO:0016020] membrane; [PTHR12383] PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED; [GO:0008236] serine-type peptidase activity; [KOG1568] Mitochondrial inner membrane protease, subunit IMP2; [PTHR12383:SF5] MITOCHONDRIAL INNER MEMBRANE SIGNAL PEPTIDASE, PUTATIVE SERINE PEPTIDASE CLAN S; [GO:0006508] proteolysis12.000.7285
15 Mapoly0025s0027 [GO:0005840] ribosome; [PF01632] Ribosomal protein L35; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation13.420.7159
16 Mapoly0006s0297 [KOG3377] Uncharacterized conserved protein; [PF05811] Eukaryotic protein of unknown function (DUF842); [PTHR21096] UNCHARACTERIZED15.100.7184
17 Mapoly0003s0233 -15.490.7309
18 Mapoly0062s0069 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family17.150.7587
19 Mapoly0046s0093 [GO:0005840] ribosome; [PF01084] Ribosomal protein S18; [PTHR13479] 30S RIBOSOMAL PROTEIN S18; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation17.550.7122
20 Mapoly0159s0007 [PTHR31472] FAMILY NOT NAMED; [KOG3416] Predicted nucleic acid binding protein; [K07466] replication factor A118.650.6565
21 Mapoly0007s0070 [PF08991] Domain of unknown function (DUF1903)20.450.6792
22 Mapoly0032s0026 [GO:0008270] zinc ion binding; [KOG3277] Uncharacterized conserved protein; [PF05180] DNL zinc finger20.980.6756
23 Mapoly0010s0155 [PF08213] Mitochondrial domain of unknown function (DUF1713)21.490.7345
24 Mapoly0057s0013 -22.490.6660
25 Mapoly0059s0059 [PTHR23422] DIPEPTIDYL PEPTIDASE III-RELATED; [GO:0016787] hydrolase activity; [PF03571] Peptidase family M49; [PF00293] NUDIX domain22.910.7034
26 Mapoly0005s0236 [K14423] 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase [EC:1.14.13.72]; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [KOG0873] C-4 sterol methyl oxidase; [GO:0006633] fatty acid biosynthetic process; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [1.14.13.72] Methylsterol monooxygenase.; [PTHR11863] STEROL DESATURASE23.070.6380
27 Mapoly0016s0053 [K14191] 18S rRNA (adenine1779-N6/adenine1780-N6)-dimethyltransferase [EC:2.1.1.183]; [2.1.1.183] 18S rRNA (adenine(1779)-N(6)/adenine(1780)-N(6))-dimethyltransferase.; [PTHR11727] DIMETHYLADENOSINE TRANSFERASE; [GO:0000154] rRNA modification; [KOG0820] Ribosomal RNA adenine dimethylase; [GO:0000179] rRNA (adenine-N6,N6-)-dimethyltransferase activity; [PF00398] Ribosomal RNA adenine dimethylase; [GO:0008649] rRNA methyltransferase activity24.740.7493
28 Mapoly0106s0015 [PTHR12561] LIPOATE-PROTEIN LIGASE; [GO:0006464] cellular protein modification process; [PF03099] Biotin/lipoate A/B protein ligase family27.130.7076
29 Mapoly0049s0105 [GO:0016272] prefoldin complex; [KOG4098] Molecular chaperone Prefoldin, subunit 2; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding; [PTHR13303] PREFOLDIN SUBUNIT 2; [PF01920] Prefoldin subunit27.280.6529
30 Mapoly0008s0076 [GO:0005840] ribosome; [PTHR18804] FAMILY NOT NAMED; [GO:0003735] structural constituent of ribosome; [PF00444] Ribosomal protein L36; [GO:0005622] intracellular; [KOG4122] Mitochondrial/chloroplast ribosomal protein L36; [GO:0006412] translation27.870.6792
31 Mapoly0076s0035 [PF05773] RWD domain; [GO:0005515] protein binding; [PTHR12292] RWD DOMAIN-CONTAINING PROTEIN; [KOG4018] Uncharacterized conserved protein, contains RWD domain29.090.6653
32 Mapoly0027s0008 [GO:0005515] protein binding; [KOG0280] Uncharacterized conserved protein; [PTHR22850] WD40 REPEAT FAMILY; [PF00400] WD domain, G-beta repeat30.000.6555
33 Mapoly0001s0539 -30.200.7062
34 Mapoly0026s0005 [PTHR13291] JOSEPHIN 1, 2; [PF02099] Josephin; [GO:0008242] omega peptidase activity; [KOG2934] Uncharacterized conserved protein, contains Josephin domain32.400.6418
35 Mapoly0007s0105 [PF04280] Tim44-like domain32.620.6970
36 Mapoly0085s0072 [KOG2703] C4-type Zn-finger protein; [PTHR10876] ZINC FINGER PROTEIN ZPR1; [PF03367] ZPR1 zinc-finger domain; [GO:0008270] zinc ion binding; [PTHR10876:SF0] ZINC FINGER PROTEIN ZPR1; [K06874] Sep-tRNA:Cys-tRNA synthetase [EC:2.5.1.73]32.630.5663
37 Mapoly0014s0200 [GO:0003723] RNA binding; [GO:0003743] translation initiation factor activity; [PF01176] Translation initiation factor 1A / IF-1; [PTHR21641] TRANSLATION INITIATION FACTOR-RELATED; [GO:0006413] translational initiation; [KOG2925] Predicted translation initiation factor related to eIF-1A32.760.6942
38 Mapoly0012s0096 -33.050.6766
39 Mapoly0005s0032 [PF08561] Mitochondrial ribosomal protein L37; [KOG3435] Mitochondrial/chloroplast ribosomal protein L54/L3734.500.6862
40 Mapoly0005s0254 [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0173] 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1; [PTHR11599:SF44] SUBFAMILY NOT NAMED; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [K02739] 20S proteasome subunit beta 2 [EC:3.4.25.1]; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA35.210.6905
41 Mapoly0037s0012 [KOG2357] Uncharacterized conserved protein; [PTHR12883] ADIPOCYTE-SPECIFIC PROTEIN 4-RELATED; [PF07946] Protein of unknown function (DUF1682)36.060.6489
42 Mapoly0103s0022 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN36.330.6608
43 Mapoly0026s0076 [K04711] dihydroceramidase [EC:3.5.1.-]; [GO:0006672] ceramide metabolic process; [KOG2329] Alkaline ceramidase; [PF05875] Ceramidase; [GO:0016021] integral to membrane; [3.5.1.-] In linear amides.; [PTHR12956] ALKALINE CERAMIDASE-RELATED; [PTHR12956:SF4] ALKALINE PHYTOCERAMIDASE (APHC) (ALKALINE CERAMIDASE); [GO:0016811] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides38.070.6506
44 Mapoly0072s0005 [GO:0005840] ribosome; [PTHR14413] RIBOSOMAL PROTEIN L17; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01196] Ribosomal protein L17; [KOG3280] Mitochondrial/chloroplast ribosomal protein L17; [K02879] large subunit ribosomal protein L17; [GO:0006412] translation39.570.6612
45 Mapoly0116s0019 -39.890.6758
46 Mapoly0021s0071 [GO:0004843] ubiquitin-specific protease activity; [K05609] ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12]; [PTHR10589] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0005622] intracellular; [3.4.19.12] Ubiquitinyl hydrolase 1.; [PF01088] Ubiquitin carboxyl-terminal hydrolase, family 1; [KOG1415] Ubiquitin C-terminal hydrolase UCHL140.990.6095
47 Mapoly0053s0064 [GO:0016020] membrane; [PTHR12383] PROTEASE FAMILY S26 MITOCHONDRIAL INNER MEMBRANE PROTEASE-RELATED; [GO:0008236] serine-type peptidase activity; [KOG1568] Mitochondrial inner membrane protease, subunit IMP2; [K09648] mitochondrial inner membrane protease subunit 2 [EC:3.4.99.-]; [3.4.99.-] Endopeptidases of unknown catalytic mechanism.; [PF00717] Peptidase S24-like; [GO:0006508] proteolysis42.430.6632
48 Mapoly0141s0030 [PTHR23139] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [KOG0130] RNA-binding protein RBM8/Tsunagi (RRM superfamily); [K12876] RNA-binding protein 8A; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)43.820.6351
49 Mapoly0033s0011 [GO:0003723] RNA binding; [PTHR21321] PNAS-3 RELATED; [KOG1004] Exosomal 3'-5' exoribonuclease complex subunit Rrp40; [GO:0000178] exosome (RNase complex)44.900.6897
50 Mapoly0053s0018 -47.720.6874
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