Guide Gene

Gene ID
Mapoly0010s0125
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR21256] HISTIDINOL DEHYDROGENASE (HDH); [PF01502] Phosphoribosyl-AMP cyclohydrolase; [GO:0004635] phosphoribosyl-AMP cyclohydrolase activity; [3.6.1.31] Phosphoribosyl-ATP diphosphatase.; [GO:0000105] histidine biosynthetic process; [K11755] phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19]; [PF01503] Phosphoribosyl-ATP pyrophosphohydrolase; [KOG4311] Histidinol dehydrogenase; [3.5.4.19] Phosphoribosyl-AMP cyclohydrolase.

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0010s0125 [PTHR21256] HISTIDINOL DEHYDROGENASE (HDH); [PF01502] Phosphoribosyl-AMP cyclohydrolase; [GO:0004635] phosphoribosyl-AMP cyclohydrolase activity; [3.6.1.31] Phosphoribosyl-ATP diphosphatase.; [GO:0000105] histidine biosynthetic process; [K11755] phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19]; [PF01503] Phosphoribosyl-ATP pyrophosphohydrolase; [KOG4311] Histidinol dehydrogenase; [3.5.4.19] Phosphoribosyl-AMP cyclohydrolase. 0.00 1.0000
1 Mapoly0003s0283 [PF00135] Carboxylesterase family; [PTHR23024] MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES2.000.6848
2 Mapoly0168s0006 [KOG4836] Uncharacterized conserved protein; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [PF08294] TIM21; [PTHR13032] FAMILY NOT NAMED; [GO:0030150] protein import into mitochondrial matrix2.650.7369
3 Mapoly0197s0012 [GO:0005515] protein binding; [K03030] 26S proteasome regulatory subunit N11; [PF13012] Maintenance of mitochondrial structure and function; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1555] 26S proteasome regulatory complex, subunit RPN11; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [PTHR10410:SF5] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 147.140.6845
4 Mapoly0001s0092 [PF06695] Putative small multi-drug export protein11.620.5880
5 Mapoly0010s0155 [PF08213] Mitochondrial domain of unknown function (DUF1713)20.200.6815
6 Mapoly0002s0143 [PTHR24015] FAMILY NOT NAMED20.490.6768
7 Mapoly0031s0031 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation22.580.6781
8 Mapoly0052s0107 [GO:0009116] nucleoside metabolic process; [PF00215] Orotidine 5'-phosphate decarboxylase / HUMPS family; [KOG1377] Uridine 5'- monophosphate synthase/orotate phosphoribosyltransferase; [K13421] uridine monophosphate synthetase [EC:2.4.2.10 4.1.1.23]; [PTHR19278] FAMILY NOT NAMED; [4.1.1.23] Orotidine-5'-phosphate decarboxylase.; [GO:0004590] orotidine-5'-phosphate decarboxylase activity; [PTHR19278:SF9] SUBFAMILY NOT NAMED; [2.4.2.10] Orotate phosphoribosyltransferase.; [PF00156] Phosphoribosyl transferase domain; [GO:0006207] 'de novo' pyrimidine nucleobase biosynthetic process26.120.6176
9 Mapoly0173s0009 [GO:0005524] ATP binding; [K00872] homoserine kinase [EC:2.7.1.39]; [PTHR20861] HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE; [PTHR20861:SF1] HOMOSERINE KINASE; [PF08544] GHMP kinases C terminal; [2.7.1.39] Homoserine kinase.; [PF00288] GHMP kinases N terminal domain; [KOG1537] Homoserine kinase28.340.6386
10 Mapoly0063s0083 [KOG3492] Ribosome biogenesis protein NIP7; [K07565] 60S ribosome subunit biogenesis protein NIP7; [PF03657] Uncharacterised protein family (UPF0113); [PTHR23415:SF4] 60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7; [PTHR23415] CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP730.400.6721
11 Mapoly0040s0040 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3083] Prohibitin; [PF01145] SPFH domain / Band 7 family30.590.6567
12 Mapoly0173s0007 [GO:0005515] protein binding; [PTHR10855:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; [KOG1498] 26S proteasome regulatory complex, subunit RPN5/PSMD12; [K03035] 26S proteasome regulatory subunit N5; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 431.890.6554
13 Mapoly0116s0019 -31.940.6324
14 Mapoly0012s0185 [GO:0055114] oxidation-reduction process; [GO:0009396] folic acid-containing compound biosynthetic process; [GO:0004488] methylenetetrahydrofolate dehydrogenase (NADP+) activity; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF02882] Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; [PF00763] Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; [GO:0003824] catalytic activity; [KOG0089] Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase34.350.6546
15 Mapoly0008s0076 [GO:0005840] ribosome; [PTHR18804] FAMILY NOT NAMED; [GO:0003735] structural constituent of ribosome; [PF00444] Ribosomal protein L36; [GO:0005622] intracellular; [KOG4122] Mitochondrial/chloroplast ribosomal protein L36; [GO:0006412] translation35.500.6227
16 Mapoly0016s0142 [GO:0005524] ATP binding; [KOG2355] Predicted ABC-type transport, ATPase component/CCR4 associated factor; [K12608] CCR4-NOT complex subunit CAF16; [GO:0016887] ATPase activity; [PTHR12847:SF6] SUBFAMILY NOT NAMED; [PTHR12847] ATP-BINDING CASSETTE (ABC) TRANSPORTER-RELATED; [PF00005] ABC transporter36.220.6069
17 Mapoly0112s0035 [PF04117] Mpv17 / PMP22 family; [PTHR11266:SF5] 22 KDA PEROXISOMAL MEMBRANE PROTEIN; [GO:0016021] integral to membrane; [PTHR11266] PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 (MPV17)36.440.6322
18 Mapoly0098s0035 [PTHR11387] CYTOCHROME C OXIDASE POLYPEPTIDE VIB; [K02267] cytochrome c oxidase subunit VIb [EC:1.9.3.1]; [1.9.3.1] Cytochrome-c oxidase.; [GO:0005739] mitochondrion; [PF02297] Cytochrome oxidase c subunit VIb; [GO:0004129] cytochrome-c oxidase activity; [KOG3057] Cytochrome c oxidase, subunit VIb/COX1236.520.6161
19 Mapoly0004s0269 [GO:0048500] signal recognition particle; [K03105] signal recognition particle subunit SRP19; [KOG3198] Signal recognition particle, subunit Srp19; [PTHR17453] SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN; [GO:0008312] 7S RNA binding; [PF01922] SRP19 protein; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR17453:SF0] SUBFAMILY NOT NAMED39.500.6153
20 Mapoly0002s0206 [PF10213] Mitochondrial ribosomal subunit protein; [PTHR13490] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S2841.580.6276
21 Mapoly0007s0165 -47.250.6113
22 Mapoly0028s0095 [GO:0005744] mitochondrial inner membrane presequence translocase complex; [PTHR10485] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17; [PTHR10485:SF0] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM-17; [KOG1652] Mitochondrial import inner membrane translocase, subunit TIM17; [GO:0006886] intracellular protein transport; [PF02466] Tim17/Tim22/Tim23/Pmp24 family; [GO:0015450] P-P-bond-hydrolysis-driven protein transmembrane transporter activity49.360.6380
23 Mapoly0001s0200 [K01778] diaminopimelate epimerase [EC:5.1.1.7]; [PF01678] Diaminopimelate epimerase; [5.1.1.7] Diaminopimelate epimerase.; [GO:0008837] diaminopimelate epimerase activity; [GO:0009089] lysine biosynthetic process via diaminopimelate; [PTHR31689] FAMILY NOT NAMED; [PTHR31689:SF0] SUBFAMILY NOT NAMED50.200.6233
24 Mapoly0030s0127 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED50.350.5678
25 Mapoly0010s0007 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit52.920.5959
26 Mapoly0014s0186 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3090] Prohibitin-like protein; [PF01145] SPFH domain / Band 7 family52.960.6294
27 Mapoly0013s0023 [GO:0000287] magnesium ion binding; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF03483] B3/4 domain; [GO:0005737] cytoplasm; [K01890] phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]; [GO:0004826] phenylalanine-tRNA ligase activity; [PF03484] tRNA synthetase B5 domain; [6.1.1.20] Phenylalanine--tRNA ligase.; [GO:0043039] tRNA aminoacylation; [GO:0006432] phenylalanyl-tRNA aminoacylation; [GO:0000049] tRNA binding; [KOG2472] Phenylalanyl-tRNA synthetase beta subunit; [GO:0004812] aminoacyl-tRNA ligase activity; [PTHR10947] PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47; [PF01409] tRNA synthetases class II core domain (F)53.110.6340
28 Mapoly0163s0014 [PF00168] C2 domain; [PTHR32246] FAMILY NOT NAMED; [GO:0005515] protein binding53.770.5831
29 Mapoly0067s0028 [GO:0051087] chaperone binding; [PTHR21237] GRPE PROTEIN; [PF01025] GrpE; [GO:0006457] protein folding; [GO:0042803] protein homodimerization activity; [K03687] molecular chaperone GrpE; [KOG3003] Molecular chaperone of the GrpE family; [GO:0000774] adenyl-nucleotide exchange factor activity55.150.6149
30 Mapoly0028s0048 [GO:0004106] chorismate mutase activity; [5.4.99.5] Chorismate mutase.; [GO:0046417] chorismate metabolic process; [KOG0795] Chorismate mutase; [GO:0009073] aromatic amino acid family biosynthetic process; [PTHR21145:SF0] SUBFAMILY NOT NAMED; [PF01817] Chorismate mutase type II; [K01850] chorismate mutase [EC:5.4.99.5]; [PTHR21145] CHORISMATE MUTASE62.140.5406
31 Mapoly0090s0044 [PTHR13362] MITOCHONDRIAL RIBOSOMAL PROTEIN S33; [KOG4844] Mitochondrial ribosomal protein S27; [PF08293] Mitochondrial ribosomal subunit S2762.260.5968
32 Mapoly0011s0012 [GO:0016020] membrane; [KOG2620] Prohibitins and stomatins of the PID superfamily; [PTHR10264] BAND 7 PROTEIN-RELATED; [PTHR10264:SF27] UNCHARACTERIZED; [PF01145] SPFH domain / Band 7 family62.390.6336
33 Mapoly0137s0028 -62.930.5699
34 Mapoly0037s0115 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain65.730.5298
35 Mapoly0041s0070 [GO:0055114] oxidation-reduction process; [KOG2742] Predicted oxidoreductase; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR22604:SF53] SUBFAMILY NOT NAMED; [PF01408] Oxidoreductase family, NAD-binding Rossmann fold; [PF02894] Oxidoreductase family, C-terminal alpha/beta domain; [PTHR22604] OXIDOREDUCTASES66.750.5230
36 Mapoly0020s0151 [PTHR12934] 50S RIBOSOMAL PROTEIN L15; [PF00828] Ribosomal protein L18e/L15; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [GO:0006412] translation75.100.6096
37 Mapoly0153s0027 [PTHR22889] UNCHARACTERIZED; [KOG1188] WD40 repeat protein; [GO:0005515] protein binding; [PF00400] WD domain, G-beta repeat80.940.6277
38 Mapoly0094s0023 [PTHR13582] M-PHASE PHOSPHOPROTEIN 6; [PF10175] M-phase phosphoprotein 681.390.5856
39 Mapoly0034s0066 [GO:0005840] ribosome; [PTHR21349] 50S RIBOSOMAL PROTEIN L21; [KOG1686] Mitochondrial/chloroplast ribosomal L21 protein; [PF00829] Ribosomal prokaryotic L21 protein84.440.5880
40 Mapoly0031s0040 [PF00206] Lyase; [4.3.2.2] Adenylosuccinate lyase.; [K01756] adenylosuccinate lyase [EC:4.3.2.2]; [KOG2700] Adenylosuccinate lyase; [PF08328] Adenylosuccinate lyase C-terminal; [GO:0004018] N6-(1,2-dicarboxyethyl)AMP AMP-lyase (fumarate-forming) activity; [PTHR11444] ASPARTATEAMMONIA/ARGININOSUCCINATE/ADENYLOSUCCINATE LYASE; [GO:0006188] IMP biosynthetic process88.860.6118
41 Mapoly0014s0161 [PTHR23029] PHOSPHOGLYCERATE MUTASE; [KOG0235] Phosphoglycerate mutase; [PF00300] Histidine phosphatase superfamily (branch 1)89.330.5418
42 Mapoly0059s0038 [KOG3170] Conserved phosducin-like protein; [PTHR21148] PHOSDUCIN-RELATED; [PTHR21148:SF1] PHOSDUCIN-LIKE PROTEIN 2, 3 (VIRAL IAP-ASSOCIATED FACTOR 1); [PF02114] Phosducin92.120.5639
43 Mapoly0102s0033 [GO:0005840] ribosome; [K02899] large subunit ribosomal protein L27; [GO:0003735] structural constituent of ribosome; [KOG4600] Mitochondrial ribosomal protein MRP7 (L2); [GO:0005622] intracellular; [PTHR15893] RIBOSOMAL PROTEIN L27; [GO:0006412] translation; [PF01016] Ribosomal L27 protein96.940.5606
44 Mapoly0007s0029 [KOG3165] Predicted nucleic-acid-binding protein, contains PIN domain; [PF04900] Fcf1; [PTHR12416] UNCHARACTERIZED; [GO:0032040] small-subunit processome; [K14566] U3 small nucleolar RNA-associated protein 2497.570.6012
45 Mapoly0077s0061 -100.500.5400
46 Mapoly0108s0066 [GO:0005524] ATP binding; [PF08544] GHMP kinases C terminal; [PF00288] GHMP kinases N terminal domain; [KOG4519] Phosphomevalonate kinase; [PTHR31814] FAMILY NOT NAMED; [2.7.4.2] Phosphomevalonate kinase.; [K00938] phosphomevalonate kinase [EC:2.7.4.2]102.370.5242
47 Mapoly0072s0022 [GO:0003746] translation elongation factor activity; [GO:0006414] translational elongation; [PTHR11741] ELONGATION FACTOR TS; [GO:0005622] intracellular; [PF00889] Elongation factor TS; [KOG1071] Mitochondrial translation elongation factor EF-Tsmt, catalyzes nucleotide exchange on EF-Tumt102.470.5583
48 Mapoly0224s0003 -105.300.5457
49 Mapoly0015s0052 [KOG2467] Glycine/serine hydroxymethyltransferase; [GO:0006544] glycine metabolic process; [2.1.2.1] Glycine hydroxymethyltransferase.; [GO:0006563] L-serine metabolic process; [K00600] glycine hydroxymethyltransferase [EC:2.1.2.1]; [PF00464] Serine hydroxymethyltransferase; [GO:0004372] glycine hydroxymethyltransferase activity; [PTHR11680] SERINE HYDROXYMETHYLTRANSFERASE106.240.6013
50 Mapoly0070s0010 [PTHR10721] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44; [PF04280] Tim44-like domain; [KOG2580] Mitochondrial import inner membrane translocase, subunit TIM44108.940.5909
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