Guide Gene

Gene ID
Mapoly0031s0031
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0031s0031 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation 0.00 1.0000
1 Mapoly0063s0083 [KOG3492] Ribosome biogenesis protein NIP7; [K07565] 60S ribosome subunit biogenesis protein NIP7; [PF03657] Uncharacterised protein family (UPF0113); [PTHR23415:SF4] 60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP7; [PTHR23415] CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP71.410.8397
2 Mapoly0168s0006 [KOG4836] Uncharacterized conserved protein; [GO:0005744] mitochondrial inner membrane presequence translocase complex; [PF08294] TIM21; [PTHR13032] FAMILY NOT NAMED; [GO:0030150] protein import into mitochondrial matrix1.410.8312
3 Mapoly0004s0269 [GO:0048500] signal recognition particle; [K03105] signal recognition particle subunit SRP19; [KOG3198] Signal recognition particle, subunit Srp19; [PTHR17453] SIGNAL RECOGNITION PARTICLE 19 KD PROTEIN; [GO:0008312] 7S RNA binding; [PF01922] SRP19 protein; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR17453:SF0] SUBFAMILY NOT NAMED2.450.7946
4 Mapoly0007s0267 -2.830.7886
5 Mapoly0070s0010 [PTHR10721] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44; [PF04280] Tim44-like domain; [KOG2580] Mitochondrial import inner membrane translocase, subunit TIM442.830.8174
6 Mapoly0040s0040 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3083] Prohibitin; [PF01145] SPFH domain / Band 7 family3.460.8311
7 Mapoly0008s0076 [GO:0005840] ribosome; [PTHR18804] FAMILY NOT NAMED; [GO:0003735] structural constituent of ribosome; [PF00444] Ribosomal protein L36; [GO:0005622] intracellular; [KOG4122] Mitochondrial/chloroplast ribosomal protein L36; [GO:0006412] translation5.830.7665
8 Mapoly0012s0185 [GO:0055114] oxidation-reduction process; [GO:0009396] folic acid-containing compound biosynthetic process; [GO:0004488] methylenetetrahydrofolate dehydrogenase (NADP+) activity; [PTHR10025] TETRAHYDROFOLATE DEHYDROGENASE/CYCLOHYDROLASE FAMILY MEMBER; [PF02882] Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; [PF00763] Tetrahydrofolate dehydrogenase/cyclohydrolase, catalytic domain; [GO:0003824] catalytic activity; [KOG0089] Methylenetetrahydrofolate dehydrogenase/methylenetetrahydrofolate cyclohydrolase7.480.7907
9 Mapoly0030s0127 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED9.380.6886
10 Mapoly0006s0092 [PTHR24012] FAMILY NOT NAMED; [KOG0131] Splicing factor 3b, subunit 4; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)10.250.7956
11 Mapoly0014s0101 [PTHR23105:SF5] 50S RIBOSOMAL PROTEIN L1P; [PF00687] Ribosomal protein L1p/L10e family; [KOG1685] Uncharacterized conserved protein; [PTHR23105] RIBOSOMAL PROTEIN L7AE FAMILY MEMBER10.580.7745
12 Mapoly0002s0206 [PF10213] Mitochondrial ribosomal subunit protein; [PTHR13490] MITOCHONDRIAL 28S RIBOSOMAL PROTEIN S2811.180.7530
13 Mapoly0001s0445 [GO:0005840] ribosome; [KOG1711] Mitochondrial/chloroplast ribosomal protein L22; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [PTHR13501:SF1] SUBFAMILY NOT NAMED; [PTHR13501] CHLOROPLAST 50S RIBOSOMAL PROTEIN L22-RELATED; [PF00237] Ribosomal protein L22p/L17e; [GO:0006412] translation11.960.7774
14 Mapoly0014s0080 [PF03587] EMG1/NEP1 methyltransferase; [GO:0008168] methyltransferase activity; [PTHR12636:SF5] SUBFAMILY NOT NAMED; [KOG3073] Protein required for 18S rRNA maturation and 40S ribosome biogenesis; [K14568] essential for mitotic growth 1; [PTHR12636] NEP1/MRA112.960.7780
15 Mapoly0029s0089 [PTHR12184] BASIC FGF-REPRESSED ZIC BINDING PROTEIN HOMOLOG (ZIC3-BINDING PROTEIN); [PF03981] Ubiquinol-cytochrome C chaperone; [PTHR12184:SF1] ZIC3 BINDING PROTEIN-RELATED15.650.7246
16 Mapoly0013s0023 [GO:0000287] magnesium ion binding; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF03483] B3/4 domain; [GO:0005737] cytoplasm; [K01890] phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]; [GO:0004826] phenylalanine-tRNA ligase activity; [PF03484] tRNA synthetase B5 domain; [6.1.1.20] Phenylalanine--tRNA ligase.; [GO:0043039] tRNA aminoacylation; [GO:0006432] phenylalanyl-tRNA aminoacylation; [GO:0000049] tRNA binding; [KOG2472] Phenylalanyl-tRNA synthetase beta subunit; [GO:0004812] aminoacyl-tRNA ligase activity; [PTHR10947] PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47; [PF01409] tRNA synthetases class II core domain (F)16.120.7845
17 Mapoly0137s0028 -16.430.6873
18 Mapoly0010s0155 [PF08213] Mitochondrial domain of unknown function (DUF1713)17.320.7597
19 Mapoly0010s0007 [PF00574] Clp protease; [3.4.21.92] Endopeptidase Clp.; [K01358] ATP-dependent Clp protease, protease subunit [EC:3.4.21.92]; [PTHR10381] ATP-DEPENDENT CLP PROTEASE PROTEOLYTIC SUBUNIT; [KOG0840] ATP-dependent Clp protease, proteolytic subunit17.890.6990
20 Mapoly0001s0476 [K01714] dihydrodipicolinate synthase [EC:4.2.1.52]; [GO:0016829] lyase activity; [4.2.1.52] Transferred entry: 4.3.3.7.; [PTHR12128:SF15] DIHYDRODIPICOLINATE SYNTHASE; [GO:0008152] metabolic process; [PTHR12128] DIHYDRODIPICOLINATE SYNTHASE; [PF00701] Dihydrodipicolinate synthetase family18.490.7641
21 Mapoly0132s0010 [GO:0005524] ATP binding; [K01876] aspartyl-tRNA synthetase [EC:6.1.1.12]; [GO:0004815] aspartate-tRNA ligase activity; [GO:0005737] cytoplasm; [GO:0006422] aspartyl-tRNA aminoacylation; [6.1.1.12] Aspartate--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [KOG0556] Aspartyl-tRNA synthetase; [PTHR22594:SF10] SUBFAMILY NOT NAMED; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)18.490.7885
22 Mapoly0107s0028 [GO:0008168] methyltransferase activity; [PF00590] Tetrapyrrole (Corrin/Porphyrin) Methylases; [PTHR10882:SF0] DIPHTHINE SYNTHASE; [GO:0008152] metabolic process; [PTHR10882] DIPHTHINE SYNTHASE; [2.1.1.98] Diphthine synthase.; [K00586] diphthine synthase [EC:2.1.1.98]; [KOG3123] Diphthine synthase19.600.7668
23 Mapoly0067s0028 [GO:0051087] chaperone binding; [PTHR21237] GRPE PROTEIN; [PF01025] GrpE; [GO:0006457] protein folding; [GO:0042803] protein homodimerization activity; [K03687] molecular chaperone GrpE; [KOG3003] Molecular chaperone of the GrpE family; [GO:0000774] adenyl-nucleotide exchange factor activity21.630.7424
24 Mapoly0002s0143 [PTHR24015] FAMILY NOT NAMED21.910.7454
25 Mapoly0010s0125 [PTHR21256] HISTIDINOL DEHYDROGENASE (HDH); [PF01502] Phosphoribosyl-AMP cyclohydrolase; [GO:0004635] phosphoribosyl-AMP cyclohydrolase activity; [3.6.1.31] Phosphoribosyl-ATP diphosphatase.; [GO:0000105] histidine biosynthetic process; [K11755] phosphoribosyl-ATP pyrophosphohydrolase / phosphoribosyl-AMP cyclohydrolase [EC:3.6.1.31 3.5.4.19]; [PF01503] Phosphoribosyl-ATP pyrophosphohydrolase; [KOG4311] Histidinol dehydrogenase; [3.5.4.19] Phosphoribosyl-AMP cyclohydrolase.22.580.6781
26 Mapoly0037s0016 [KOG2096] WD40 repeat protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat23.870.7426
27 Mapoly0173s0007 [GO:0005515] protein binding; [PTHR10855:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; [KOG1498] 26S proteasome regulatory complex, subunit RPN5/PSMD12; [K03035] 26S proteasome regulatory subunit N5; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 424.680.7493
28 Mapoly0098s0036 [GO:0005840] ribosome; [GO:0003723] RNA binding; [PTHR13718] RIBOSOMAL S SUBUNIT; [PF00333] Ribosomal protein S5, N-terminal domain; [GO:0003735] structural constituent of ribosome; [GO:0006412] translation; [PF03719] Ribosomal protein S5, C-terminal domain24.820.7815
29 Mapoly0020s0151 [PTHR12934] 50S RIBOSOMAL PROTEIN L15; [PF00828] Ribosomal protein L18e/L15; [GO:0003735] structural constituent of ribosome; [GO:0015934] large ribosomal subunit; [GO:0006412] translation26.460.7507
30 Mapoly0032s0021 [KOG2555] AICAR transformylase/IMP cyclohydrolase/methylglyoxal synthase; [PF01808] AICARFT/IMPCHase bienzyme; [PTHR11692] BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN; [GO:0003937] IMP cyclohydrolase activity; [PF02142] MGS-like domain; [GO:0004643] phosphoribosylaminoimidazolecarboxamide formyltransferase activity; [3.5.4.10] IMP cyclohydrolase.; [GO:0006164] purine nucleotide biosynthetic process; [2.1.2.3] Phosphoribosylaminoimidazolecarboxamide formyltransferase.; [K00602] phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]27.000.7527
31 Mapoly0007s0196 [KOG4655] U3 small nucleolar ribonucleoprotein (snoRNP) component; [GO:0003723] RNA binding; [PTHR11831:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP3; [PTHR11831] 30S 40S RIBOSOMAL PROTEIN; [GO:0019843] rRNA binding; [PF00163] Ribosomal protein S4/S9 N-terminal domain; [GO:0005622] intracellular; [K14560] U3 small nucleolar ribonucleoprotein protein IMP3; [PF01479] S4 domain27.280.7469
32 Mapoly0007s0029 [KOG3165] Predicted nucleic-acid-binding protein, contains PIN domain; [PF04900] Fcf1; [PTHR12416] UNCHARACTERIZED; [GO:0032040] small-subunit processome; [K14566] U3 small nucleolar RNA-associated protein 2427.500.7646
33 Mapoly0010s0169 [PTHR31184] FAMILY NOT NAMED; [KOG3450] Huntingtin interacting protein HYPK27.930.7479
34 Mapoly0108s0062 [K03016] DNA-directed RNA polymerases I, II, and III subunit RPABC3; [PTHR10917:SF0] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3; [PTHR10917] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC3; [PF03870] RNA polymerase Rpb8; [KOG3400] RNA polymerase subunit 8; [GO:0006351] transcription, DNA-dependent30.300.7225
35 Mapoly0156s0015 [GO:0005524] ATP binding; [KOG0361] Chaperonin complex component, TCP-1 eta subunit (CCT7); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [PTHR11353:SF22] CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ETA SUBUNIT, TCPH; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding30.760.7574
36 Mapoly0028s0079 [PF01981] Peptidyl-tRNA hydrolase PTH2; [3.1.1.29] Aminoacyl-tRNA hydrolase.; [K04794] peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]; [KOG3282] Uncharacterized conserved protein; [PTHR12649] PEPTIDYL-TRNA HYDROLASE 2; [GO:0004045] aminoacyl-tRNA hydrolase activity34.910.7550
37 Mapoly0038s0028 [6.3.4.5] Argininosuccinate synthase.; [GO:0005524] ATP binding; [PF00764] Arginosuccinate synthase; [GO:0004055] argininosuccinate synthase activity; [GO:0006526] arginine biosynthetic process; [PTHR11587] ARGININOSUCCINATE SYNTHASE; [KOG1706] Argininosuccinate synthase; [K01940] argininosuccinate synthase [EC:6.3.4.5]35.500.7581
38 Mapoly0173s0009 [GO:0005524] ATP binding; [K00872] homoserine kinase [EC:2.7.1.39]; [PTHR20861] HOMOSERINE/4-DIPHOSPHOCYTIDYL-2-C-METHYL-D-ERYTHRITOL KINASE; [PTHR20861:SF1] HOMOSERINE KINASE; [PF08544] GHMP kinases C terminal; [2.7.1.39] Homoserine kinase.; [PF00288] GHMP kinases N terminal domain; [KOG1537] Homoserine kinase35.550.7002
39 Mapoly0003s0283 [PF00135] Carboxylesterase family; [PTHR23024] MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES35.670.6434
40 Mapoly0143s0027 [PTHR22851] U3 SMALL NUCLEOLAR RNA (U3 SNORNA) ASSOCIATED PROTEIN; [PTHR22851:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [KOG0268] Sof1-like rRNA processing protein (contains WD40 repeats); [K11806] WD repeat and SOF domain-containing protein 1; [PF04158] Sof1-like domain; [PF00400] WD domain, G-beta repeat37.350.7676
41 Mapoly0011s0012 [GO:0016020] membrane; [KOG2620] Prohibitins and stomatins of the PID superfamily; [PTHR10264] BAND 7 PROTEIN-RELATED; [PTHR10264:SF27] UNCHARACTERIZED; [PF01145] SPFH domain / Band 7 family38.960.7444
42 Mapoly0116s0019 -39.260.7098
43 Mapoly0128s0026 [GO:0005840] ribosome; [K02961] small subunit ribosomal protein S17; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG1740] Predicted mitochondrial/chloroplast ribosomal protein S17; [PF00366] Ribosomal protein S17; [GO:0006412] translation; [PTHR10744] 40S RIBOSOMAL PROTEIN S11 FAMILY MEMBER43.360.7403
44 Mapoly0163s0014 [PF00168] C2 domain; [PTHR32246] FAMILY NOT NAMED; [GO:0005515] protein binding44.870.6305
45 Mapoly0014s0186 [GO:0016020] membrane; [PTHR23222] PROHIBITIN; [KOG3090] Prohibitin-like protein; [PF01145] SPFH domain / Band 7 family46.480.7202
46 Mapoly0182s0013 [PF07719] Tetratricopeptide repeat; [PF13414] TPR repeat; [KOG2449] Methylmalonate semialdehyde dehydrogenase; [PTHR22904] TPR REPEAT CONTAINING PROTEIN49.020.6880
47 Mapoly0004s0173 [PF02536] mTERF; [PTHR13068] CGI-12 PROTEIN-RELATED49.960.6765
48 Mapoly0062s0069 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family50.010.7397
49 Mapoly0025s0027 [GO:0005840] ribosome; [PF01632] Ribosomal protein L35; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation52.250.6750
50 Mapoly0153s0027 [PTHR22889] UNCHARACTERIZED; [KOG1188] WD40 repeat protein; [GO:0005515] protein binding; [PF00400] WD domain, G-beta repeat52.540.7545
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