Guide Gene

Gene ID
Mapoly0001s0399
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13243] Prenyltransferase-like; [5.4.99.8] Cycloartenol synthase.; [K01853] cycloartenol synthase [EC:5.4.99.8]; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [KOG0497] Oxidosqualene-lanosterol cyclase and related proteins; [PTHR11764] FAMILY NOT NAMED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0399 [PF13243] Prenyltransferase-like; [5.4.99.8] Cycloartenol synthase.; [K01853] cycloartenol synthase [EC:5.4.99.8]; [GO:0003824] catalytic activity; [PF00432] Prenyltransferase and squalene oxidase repeat; [KOG0497] Oxidosqualene-lanosterol cyclase and related proteins; [PTHR11764] FAMILY NOT NAMED 0.00 1.0000
1 Mapoly0045s0033 [PTHR16199] FAMILY NOT NAMED; [K11492] condensin-2 complex subunit G2; [GO:0005634] nucleus; [PF12422] Condensin II non structural maintenance of chromosomes subunit1.730.7962
2 Mapoly0025s0004 [GO:0009058] biosynthetic process; [K00654] serine palmitoyltransferase [EC:2.3.1.50]; [GO:0030170] pyridoxal phosphate binding; [PTHR13693] CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE; [2.3.1.50] Serine C-palmitoyltransferase.; [PF00155] Aminotransferase class I and II; [KOG1358] Serine palmitoyltransferase; [PTHR13693:SF2] SERINE PALMITOYLTRANSFERASE I2.650.7685
3 Mapoly0035s0098 -3.160.7997
4 Mapoly0156s0015 [GO:0005524] ATP binding; [KOG0361] Chaperonin complex component, TCP-1 eta subunit (CCT7); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [PTHR11353:SF22] CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ETA SUBUNIT, TCPH; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding3.610.8180
5 Mapoly0003s0192 [K05917] cytochrome P450, family 51 (sterol 14-demethylase) [EC:1.14.13.70]; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [1.14.13.70] Sterol 14-alpha-demethylase.; [GO:0020037] heme binding; [KOG0684] Cytochrome P450; [PF00067] Cytochrome P450; [PTHR24286] FAMILY NOT NAMED8.250.7477
6 Mapoly0005s0236 [K14423] 4,4-dimethyl-9beta,19-cyclopropylsterol-4alpha-methyl oxidase [EC:1.14.13.72]; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [KOG0873] C-4 sterol methyl oxidase; [GO:0006633] fatty acid biosynthetic process; [GO:0016491] oxidoreductase activity; [PF04116] Fatty acid hydroxylase superfamily; [1.14.13.72] Methylsterol monooxygenase.; [PTHR11863] STEROL DESATURASE8.370.7188
7 Mapoly0182s0013 [PF07719] Tetratricopeptide repeat; [PF13414] TPR repeat; [KOG2449] Methylmalonate semialdehyde dehydrogenase; [PTHR22904] TPR REPEAT CONTAINING PROTEIN9.490.7440
8 Mapoly0224s0005 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PTHR11711:SF26] ADP-RIBOSYLATION FACTOR-LIKE 2, ARL2; [PF00025] ADP-ribosylation factor family; [K07943] ADP-ribosylation factor-like 2; [KOG0073] GTP-binding ADP-ribosylation factor-like protein ARL2; [GO:0005525] GTP binding10.680.7727
9 Mapoly0136s0010 [K03028] 26S proteasome regulatory subunit N1; [GO:0000502] proteasome complex; [PTHR10943] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT; [KOG2005] 26S proteasome regulatory complex, subunit RPN1/PSMD2; [PTHR10943:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 2 (26S PROTEASOME REGULATORY SUBUNIT RPN1); [GO:0030234] enzyme regulator activity; [PF01851] Proteasome/cyclosome repeat; [GO:0042176] regulation of protein catabolic process11.830.7889
10 Mapoly0004s0085 [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN; [PF13415] Galactose oxidase, central domain; [KOG4693] Uncharacterized conserved protein, contains kelch repeat11.870.6983
11 Mapoly0028s0083 [3.1.2.15] Ubiquitin thiolesterase.; [KOG0944] Ubiquitin-specific protease UBP14; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0005515] protein binding; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0008270] zinc ion binding; [K11836] ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.1.2.15]; [PF00627] UBA/TS-N domain; [PTHR24006] FAMILY NOT NAMED; [PF02148] Zn-finger in ubiquitin-hydrolases and other protein12.850.7661
12 Mapoly0087s0035 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [PTHR24115:SF105] SUBFAMILY NOT NAMED; [KOG0243] Kinesin-like protein; [GO:0005871] kinesin complex; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity14.390.7679
13 Mapoly0081s0060 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24350] SERINE/THREONINE-PROTEIN KINASE IAL-RELATED; [2.7.11.1] Non-specific serine/threonine protein kinase.; [KOG0580] Serine/threonine protein kinase; [GO:0006468] protein phosphorylation; [K08850] aurora kinase, other [EC:2.7.11.1]16.250.7224
14 Mapoly0039s0061 [PF12612] Tubulin folding cofactor D C terminal; [KOG1943] Beta-tubulin folding cofactor D; [PTHR12658] BETA-TUBULIN COFACTOR D16.490.7680
15 Mapoly0003s0245 -17.320.7668
16 Mapoly0159s0017 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR10032] ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF13837] Myb/SANT-like DNA-binding domain18.170.7532
17 Mapoly0108s0040 [PF08167] rRNA processing/ribosome biogenesis22.140.7747
18 Mapoly0037s0016 [KOG2096] WD40 repeat protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat22.800.7305
19 Mapoly0002s0295 [PF01602] Adaptin N terminal region; [GO:0016192] vesicle-mediated transport; [PTHR11134] ADAPTER-RELATED PROTEIN COMPLEX, BETA SUBUNIT; [PF02883] Adaptin C-terminal domain; [PF09066] Beta2-adaptin appendage, C-terminal sub-domain; [KOG1061] Vesicle coat complex AP-1/AP-2/AP-4, beta subunit; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [GO:0030117] membrane coat; [K12392] AP-1 complex subunit beta-1; [PTHR11134:SF3] ADAPTER-RELATED PROTEIN COMPLEX 1, BETA SUBUNIT24.000.7485
20 Mapoly0001s0481 [KOG1190] Polypyrimidine tract-binding protein; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PTHR11546] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN25.920.7660
21 Mapoly0021s0140 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [PTHR23054] UNCHARACTERIZED; [PF00610] Domain found in Dishevelled, Egl-10, and Pleckstrin (DEP); [GO:0035556] intracellular signal transduction; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [PF04784] Protein of unknown function, DUF54727.130.7001
22 Mapoly0084s0068 [PTHR10971] MRNA EXPORT FACTOR AND BUB3; [GO:0005515] protein binding; [K14298] mRNA export factor; [PTHR10971:SF11] MRNA EXPORT FACTOR; [PF00400] WD domain, G-beta repeat; [KOG0647] mRNA export protein (contains WD40 repeats)28.000.7551
23 Mapoly0112s0059 [GO:0005524] ATP binding; [KOG0328] Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily; [PTHR24031:SF57] SUBFAMILY NOT NAMED; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [K13025] ATP-dependent RNA helicase [EC:3.6.4.13]; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding29.700.7383
24 Mapoly0007s0274 [PTHR21443] CONSERVED OLIGOMERIC GOLGI COMPLEX COMPONENT 7; [KOG4182] Uncharacterized conserved protein; [GO:0006886] intracellular protein transport; [PF10191] Golgi complex component 7 (COG7); [GO:0017119] Golgi transport complex29.950.7097
25 Mapoly0011s0012 [GO:0016020] membrane; [KOG2620] Prohibitins and stomatins of the PID superfamily; [PTHR10264] BAND 7 PROTEIN-RELATED; [PTHR10264:SF27] UNCHARACTERIZED; [PF01145] SPFH domain / Band 7 family30.510.7414
26 Mapoly0024s0118 -31.300.6166
27 Mapoly0085s0078 [GO:0005524] ATP binding; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23073:SF7] 26S PROTEASE REGULATORY SUBUNIT 6A; [K03065] 26S proteasome regulatory subunit T5; [KOG0652] 26S proteasome regulatory complex, ATPase RPT532.020.7061
28 Mapoly0034s0048 [PTHR10943] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT; [PTHR10943:SF2] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1 (26S PROTEASOME REGULATORY SUBUNIT RPN2); [KOG2062] 26S proteasome regulatory complex, subunit RPN2/PSMD1; [K03032] 26S proteasome regulatory subunit N2; [PF01851] Proteasome/cyclosome repeat; [PF13646] HEAT repeats34.390.7575
29 Mapoly0088s0010 [KOG4199] Uncharacterized conserved protein; [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [PTHR22895] UNCHARACTERIZED37.740.6570
30 Mapoly0009s0112 [GO:0005524] ATP binding; [K03064] 26S proteasome regulatory subunit T4; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0651] 26S proteasome regulatory complex, ATPase RPT4; [PF00004] ATPase family associated with various cellular activities (AAA)37.950.6968
31 Mapoly0001s0432 [PF08553] VID27 cytoplasmic protein; [PTHR31913] FAMILY NOT NAMED; [KOG2395] Protein involved in vacuole import and degradation39.000.6434
32 Mapoly0080s0041 [PTHR14894] CDK5 REGULATORY SUBUNIT-ASSOCIATED PROTEIN 3; [PF05600] Protein of unknown function (DUF773); [KOG2607] CDK5 activator-binding protein40.950.6357
33 Mapoly0122s0044 [PF13812] Pentatricopeptide repeat domain; [PF12854] PPR repeat; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family42.070.7254
34 Mapoly0024s0017 [PF06376] Protein of unknown function (DUF1070)44.160.6268
35 Mapoly0016s0155 [GO:0005515] protein binding; [PF13417] Glutathione S-transferase, N-terminal domain; [KOG0406] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING; [PF13410] Glutathione S-transferase, C-terminal domain; [PF01814] Hemerythrin HHE cation binding domain45.110.7134
36 Mapoly0178s0015 [PTHR16220:SF0] SUBFAMILY NOT NAMED; [PTHR16220] WD REPEAT PROTEIN 8-RELATED; [GO:0005515] protein binding; [KOG4497] Uncharacterized conserved protein WDR8, contains WD repeats; [PF00400] WD domain, G-beta repeat45.210.6643
37 Mapoly0029s0089 [PTHR12184] BASIC FGF-REPRESSED ZIC BINDING PROTEIN HOMOLOG (ZIC3-BINDING PROTEIN); [PF03981] Ubiquinol-cytochrome C chaperone; [PTHR12184:SF1] ZIC3 BINDING PROTEIN-RELATED47.020.6719
38 Mapoly0059s0065 [GO:0008270] zinc ion binding; [PF07496] CW-type Zinc Finger47.350.7124
39 Mapoly0173s0007 [GO:0005515] protein binding; [PTHR10855:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; [KOG1498] 26S proteasome regulatory complex, subunit RPN5/PSMD12; [K03035] 26S proteasome regulatory subunit N5; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 447.830.7031
40 Mapoly0030s0127 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED48.240.6204
41 Mapoly0062s0031 -48.470.7288
42 Mapoly0055s0119 [PF05148] Hypothetical methyltransferase; [KOG3045] Predicted RNA methylase involved in rRNA processing; [GO:0008168] methyltransferase activity; [PTHR12787:SF0] SUBFAMILY NOT NAMED; [PTHR12787] UNCHARACTERIZED54.260.7341
43 Mapoly0059s0059 [PTHR23422] DIPEPTIDYL PEPTIDASE III-RELATED; [GO:0016787] hydrolase activity; [PF03571] Peptidase family M49; [PF00293] NUDIX domain54.260.6764
44 Mapoly0027s0112 [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PTHR31752] FAMILY NOT NAMED; [PF03547] Membrane transport protein59.400.6518
45 Mapoly0023s0090 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR22929] RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B; [PTHR22929:SF0] SUBFAMILY NOT NAMED60.880.7194
46 Mapoly0023s0025 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF14497] Glutathione S-transferase, C-terminal domain; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF03950] tRNA synthetases class I (E and Q), anti-codon binding domain; [KOG1147] Glutamyl-tRNA synthetase; [6.1.1.17] Glutamate--tRNA ligase.; [PTHR10119:SF15] GLUTAMINYL-TRNA SYNTHETASE; [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [GO:0006418] tRNA aminoacylation for protein translation; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17]; [GO:0004812] aminoacyl-tRNA ligase activity62.050.7355
47 Mapoly0007s0138 [PF08492] SRP72 RNA-binding domain; [PF13371] Tetratricopeptide repeat; [GO:0048500] signal recognition particle; [KOG2376] Signal recognition particle, subunit Srp72; [GO:0008312] 7S RNA binding; [PTHR14094:SF9] SIGNAL RECOGNITION PARTICLE 72; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [K03108] signal recognition particle subunit SRP72; [PTHR14094] SIGNAL RECOGNITION PARTICLE 7263.260.7275
48 Mapoly0099s0028 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0360] Chaperonin complex component, TCP-1 alpha subunit (CCT1)64.580.7051
49 Mapoly0015s0189 [K14289] exportin-5; [PTHR11223:SF3] EXPORTIN 5; [PTHR11223] EXPORTIN 1/5; [PF08389] Exportin 1-like protein67.080.7387
50 Mapoly0062s0069 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family68.990.7096
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