Guide Gene

Gene ID
Mapoly0045s0011
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PF01588] Putative tRNA binding domain; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0000049] tRNA binding; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG1247] Methionyl-tRNA synthetase

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0045s0011 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PF01588] Putative tRNA binding domain; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0000049] tRNA binding; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG1247] Methionyl-tRNA synthetase 0.00 1.0000
1 Mapoly0065s0074 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [GO:0005524] ATP binding; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF07973] Threonyl and Alanyl tRNA synthetase second additional domain; [K01868] threonyl-tRNA synthetase [EC:6.1.1.3]; [PTHR11451] TRNA SYNTHETASE-RELATED; [6.1.1.3] Threonine--tRNA ligase.; [PF03129] Anticodon binding domain; [KOG1637] Threonyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [PF02824] TGS domain; [GO:0004812] aminoacyl-tRNA ligase activity1.730.8868
2 Mapoly0013s0023 [GO:0000287] magnesium ion binding; [GO:0003723] RNA binding; [GO:0005524] ATP binding; [PF03483] B3/4 domain; [GO:0005737] cytoplasm; [K01890] phenylalanyl-tRNA synthetase beta chain [EC:6.1.1.20]; [GO:0004826] phenylalanine-tRNA ligase activity; [PF03484] tRNA synthetase B5 domain; [6.1.1.20] Phenylalanine--tRNA ligase.; [GO:0043039] tRNA aminoacylation; [GO:0006432] phenylalanyl-tRNA aminoacylation; [GO:0000049] tRNA binding; [KOG2472] Phenylalanyl-tRNA synthetase beta subunit; [GO:0004812] aminoacyl-tRNA ligase activity; [PTHR10947] PHENYLALANYL-TRNA SYNTHETASE BETA CHAIN AND LEUCINE-RICH REPEAT-CONTAINING PROTEIN 47; [PF01409] tRNA synthetases class II core domain (F)2.000.8668
3 Mapoly0079s0051 [PF13414] TPR repeat; [K00670] peptide alpha-N-acetyltransferase [EC:2.3.1.88]; [KOG1156] N-terminal acetyltransferase; [2.3.1.88] Peptide alpha-N-acetyltransferase.; [PTHR22767:SF2] N-TERMINAL ACETLYTRANSFERASE-RELATED; [PF12569] NMDA receptor-regulated protein 1; [PTHR22767] N-TERMINAL ACETLYTRANSFERASE-RELATED2.450.8757
4 Mapoly0153s0002 [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [6.1.1.4] Leucine--tRNA ligase.; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [K01869] leucyl-tRNA synthetase [EC:6.1.1.4]; [PF00133] tRNA synthetases class I (I, L, M and V); [KOG0437] Leucyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity3.160.8648
5 Mapoly0029s0100 [PF13513] HEAT-like repeat; [PF03810] Importin-beta N-terminal domain; [KOG2171] Karyopherin (importin) beta 3; [GO:0006886] intracellular protein transport; [GO:0008536] Ran GTPase binding; [PTHR10527:SF6] IMPORTIN-4 (IMPORTIN-4B)(RAN-BINDING PROTEIN 4); [PTHR10527] IMPORTIN BETA; [PF13646] HEAT repeats3.740.8559
6 Mapoly0132s0010 [GO:0005524] ATP binding; [K01876] aspartyl-tRNA synthetase [EC:6.1.1.12]; [GO:0004815] aspartate-tRNA ligase activity; [GO:0005737] cytoplasm; [GO:0006422] aspartyl-tRNA aminoacylation; [6.1.1.12] Aspartate--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [KOG0556] Aspartyl-tRNA synthetase; [PTHR22594:SF10] SUBFAMILY NOT NAMED; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)4.900.8610
7 Mapoly0061s0134 [PTHR12687] NUCLEOLAR COMPLEX 2 AND RAD4-RELATED; [KOG2256] Predicted protein involved in nuclear export of pre-ribosomes; [PF03715] Noc2p family; [PTHR12687:SF4] YEAST NUCLEOLAR COMPLEX 25.830.8806
8 Mapoly0116s0029 [GO:0008168] methyltransferase activity; [KOG0822] Protein kinase inhibitor; [K02516] protein arginine N-methyltransferase 5 [EC:2.1.1.125]; [GO:0006479] protein methylation; [PF05185] PRMT5 arginine-N-methyltransferase; [PTHR10738] PROTEIN ARGININE N-METHYLTRANSFERASE 5; [2.1.1.125] Histone-arginine N-methyltransferase.10.250.8298
9 Mapoly0071s0086 [KOG0623] Glutamine amidotransferase/cyclase; [PTHR21235:SF2] IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF (IGP SYNTHASE SUBUNIT HISF); [PTHR21235] IMIDAZOLE GLYCEROL PHOSPHATE SYNTHASE SUBUNIT HISF/H (IGP SYNTHASE SUBUNIT HISF/H); [GO:0000105] histidine biosynthetic process; [K01663] glutamine amidotransferase / cyclase [EC:2.4.2.- 4.1.3.-]; [PF00117] Glutamine amidotransferase class-I; [PF00977] Histidine biosynthesis protein; [4.1.3.-] Oxo-acid-lyases.; [2.4.2.-] Pentosyltransferases.11.000.8509
10 Mapoly0156s0015 [GO:0005524] ATP binding; [KOG0361] Chaperonin complex component, TCP-1 eta subunit (CCT7); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [PTHR11353:SF22] CHAPERONIN CONTAINING T-COMPLEX PROTEIN 1, ETA SUBUNIT, TCPH; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding12.370.8388
11 Mapoly0023s0025 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF14497] Glutathione S-transferase, C-terminal domain; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF03950] tRNA synthetases class I (E and Q), anti-codon binding domain; [KOG1147] Glutamyl-tRNA synthetase; [6.1.1.17] Glutamate--tRNA ligase.; [PTHR10119:SF15] GLUTAMINYL-TRNA SYNTHETASE; [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [GO:0006418] tRNA aminoacylation for protein translation; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17]; [GO:0004812] aminoacyl-tRNA ligase activity13.420.8492
12 Mapoly0048s0058 [PTHR12821] BYSTIN; [KOG3871] Cell adhesion complex protein bystin; [PTHR12821:SF0] SUBFAMILY NOT NAMED; [PF05291] Bystin14.490.8460
13 Mapoly0006s0183 [PF03465] eRF1 domain 3; [KOG0688] Peptide chain release factor 1 (eRF1); [K03265] peptide chain release factor eRF subunit 1; [GO:0005737] cytoplasm; [PF03463] eRF1 domain 1; [PTHR10113] PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1; [PF03464] eRF1 domain 2; [GO:0006415] translational termination; [GO:0016149] translation release factor activity, codon specific14.830.7929
14 Mapoly0027s0074 [PTHR23111] ZINC FINGER PROTEIN; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others; [KOG4198] RNA-binding Ran Zn-finger protein and related proteins15.230.8522
15 Mapoly0002s0326 [GO:0003922] GMP synthase (glutamine-hydrolyzing) activity; [GO:0005524] ATP binding; [PF00958] GMP synthase C terminal domain; [6.3.5.2] GMP synthase (glutamine-hydrolyzing).; [KOG1622] GMP synthase; [PTHR11922] GMP SYNTHASE-RELATED; [GO:0006177] GMP biosynthetic process; [K01951] GMP synthase (glutamine-hydrolysing) [EC:6.3.5.2]; [PF00117] Glutamine amidotransferase class-I; [GO:0006164] purine nucleotide biosynthetic process15.590.8518
16 Mapoly0032s0021 [KOG2555] AICAR transformylase/IMP cyclohydrolase/methylglyoxal synthase; [PF01808] AICARFT/IMPCHase bienzyme; [PTHR11692] BIFUNCTIONAL PURINE BIOSYNTHESIS PROTEIN; [GO:0003937] IMP cyclohydrolase activity; [PF02142] MGS-like domain; [GO:0004643] phosphoribosylaminoimidazolecarboxamide formyltransferase activity; [3.5.4.10] IMP cyclohydrolase.; [GO:0006164] purine nucleotide biosynthetic process; [2.1.2.3] Phosphoribosylaminoimidazolecarboxamide formyltransferase.; [K00602] phosphoribosylaminoimidazolecarboxamide formyltransferase / IMP cyclohydrolase [EC:2.1.2.3 3.5.4.10]15.650.8042
17 Mapoly0076s0020 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0342] ATP-dependent RNA helicase pitchoune; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding16.120.7773
18 Mapoly0025s0131 [GO:0006433] prolyl-tRNA aminoacylation; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [GO:0004827] proline-tRNA ligase activity; [KOG4163] Prolyl-tRNA synthetase; [PTHR11451] TRNA SYNTHETASE-RELATED; [PF03129] Anticodon binding domain; [6.1.1.15] Proline--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [PF09180] Prolyl-tRNA synthetase, C-terminal; [K01881] prolyl-tRNA synthetase [EC:6.1.1.15]16.160.8121
19 Mapoly0001s0481 [KOG1190] Polypyrimidine tract-binding protein; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PTHR11546] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN17.660.8174
20 Mapoly0079s0015 [PTHR11778] SERYL-TRNA SYNTHETASE; [GO:0005524] ATP binding; [GO:0004828] serine-tRNA ligase activity; [K01875] seryl-tRNA synthetase [EC:6.1.1.11]; [GO:0005737] cytoplasm; [GO:0006434] seryl-tRNA aminoacylation; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [KOG2509] Seryl-tRNA synthetase; [PF02403] Seryl-tRNA synthetase N-terminal domain; [GO:0000166] nucleotide binding; [PTHR11778:SF0] SUBFAMILY NOT NAMED; [6.1.1.11] Serine--tRNA ligase.; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity17.970.8353
21 Mapoly0061s0018 [KOG2318] Uncharacterized conserved protein; [GO:0005634] nucleus; [PF08159] NUC153 domain; [PTHR12202] UNCHARACTERIZED18.550.7938
22 Mapoly0061s0020 [PTHR21576:SF2] UNCHARACTERIZED NODULIN-LIKE PROTEIN; [PF08161] NUC173 domain; [KOG1248] Uncharacterized conserved protein; [PTHR21576] UNCHARACTERIZED NODULIN-LIKE PROTEIN18.570.8402
23 Mapoly0090s0010 [K04567] lysyl-tRNA synthetase, class II [EC:6.1.1.6]; [GO:0005524] ATP binding; [PTHR22594:SF4] LYSYL-TRNA SYNTHETASE; [6.1.1.6] Lysine--tRNA ligase.; [GO:0000166] nucleotide binding; [PTHR22594] ASPARTYL/LYSYL-TRNA SYNTHETASE; [GO:0003676] nucleic acid binding; [PF01336] OB-fold nucleic acid binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [KOG1885] Lysyl-tRNA synthetase (class II); [GO:0004812] aminoacyl-tRNA ligase activity; [PF00152] tRNA synthetases class II (D, K and N)18.570.8292
24 Mapoly0006s0254 [PTHR13026:SF0] SUBFAMILY NOT NAMED; [PTHR13026] NNP-1 PROTEIN (NOVEL NUCLEAR PROTEIN 1) (NOP52); [GO:0030688] preribosome, small subunit precursor; [PF05997] Nucleolar protein,Nop52; [GO:0006364] rRNA processing18.970.8040
25 Mapoly0007s0098 [GO:0005524] ATP binding; [KOG0742] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23075] PUTATIVE ATP-ASE; [PF12037] Domain of unknown function (DUF3523)18.970.8318
26 Mapoly0011s0174 [KOG2967] Uncharacterized conserved protein; [PTHR13563] RNA (GUANINE-9-) METHYLTRANSFERASE DOMAIN CONTAINING; [PTHR13563:SF6] RNA (GUANINE-9-) METHYLTRANSFERASE DOMAIN CONTAINING 2; [PF01746] tRNA (Guanine-1)-methyltransferase20.490.8092
27 Mapoly0004s0145 [PTHR24012] FAMILY NOT NAMED; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)21.330.8486
28 Mapoly0041s0009 -22.980.6852
29 Mapoly0119s0018 [PTHR12858] RIBOSOME BIOGENESIS PROTEIN; [PTHR12858:SF1] RIBOSOME BIOGENESIS PROTEIN TSR1 (20S RRNA ACCUMULATION PROTEIN 1); [GO:0042254] ribosome biogenesis; [GO:0005634] nucleus; [PF08142] AARP2CN (NUC121) domain; [KOG1980] Uncharacterized conserved protein; [PF04950] Protein of unknown function (DUF663)23.240.8516
30 Mapoly0173s0007 [GO:0005515] protein binding; [PTHR10855:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12; [KOG1498] 26S proteasome regulatory complex, subunit RPN5/PSMD12; [K03035] 26S proteasome regulatory subunit N5; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 428.340.7669
31 Mapoly0002s0313 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family28.980.7951
32 Mapoly0144s0025 [GO:0005524] ATP binding; [K04077] chaperonin GroEL; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0356] Mitochondrial chaperonin, Cpn60/Hsp60p31.460.8046
33 Mapoly0003s0044 [PTHR10745:SF0] GLYCYL-TRNA SYNTHETASE; [GO:0005524] ATP binding; [PF00587] tRNA synthetase class II core domain (G, H, P, S and T); [GO:0000166] nucleotide binding; [PTHR10745] GLYCYL-TRNA SYNTHETASE/DNA POLYMERASE SUBUNIT GAMMA-2; [6.1.1.14] Glycine--tRNA ligase.; [KOG2298] Glycyl-tRNA synthetase and related class II tRNA synthetase; [K01880] glycyl-tRNA synthetase [EC:6.1.1.14]; [PF03129] Anticodon binding domain; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity32.450.8159
34 Mapoly0034s0108 [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [KOG1122] tRNA and rRNA cytosine-C5-methylase (nucleolar protein NOL1/NOP2); [PF01189] NOL1/NOP2/sun family33.230.8391
35 Mapoly0009s0077 [PTHR14927:SF0] SUBFAMILY NOT NAMED; [KOG2321] WD40 repeat protein; [PTHR14927] UNCHARACTERIZED; [GO:0005634] nucleus; [PF08159] NUC153 domain33.410.8355
36 Mapoly0099s0044 [PTHR13389] UNCHARACTERIZED34.150.8295
37 Mapoly0032s0003 [PF05178] KRI1-like family; [KOG2409] KRR1-interacting protein involved in 40S ribosome biogenesis; [PTHR14490] ZINC FINGER, ZZ TYPE; [PF12936] KRI1-like family C-terminal34.280.8176
38 Mapoly0007s0138 [PF08492] SRP72 RNA-binding domain; [PF13371] Tetratricopeptide repeat; [GO:0048500] signal recognition particle; [KOG2376] Signal recognition particle, subunit Srp72; [GO:0008312] 7S RNA binding; [PTHR14094:SF9] SIGNAL RECOGNITION PARTICLE 72; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [K03108] signal recognition particle subunit SRP72; [PTHR14094] SIGNAL RECOGNITION PARTICLE 7235.650.7950
39 Mapoly0025s0073 [PTHR17605] RIBOSOME BIOGENESIS PROTEIN BOP1 (BLOCK OF PROLIFERATION 1 PROTEIN); [GO:0005515] protein binding; [GO:0006364] rRNA processing; [KOG0650] WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis; [PF00400] WD domain, G-beta repeat; [PF08145] BOP1NT (NUC169) domain35.670.8205
40 Mapoly0132s0039 [KOG2780] Ribosome biogenesis protein RPF1, contains IMP4 domain; [PTHR22734:SF1] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PTHR22734] U3 SMALL NUCLEOLAR RIBONUCLEOPROTEIN PROTEIN IMP4; [PF04427] Brix domain39.120.8046
41 Mapoly0111s0055 [PF10291] Muniscin C-terminal mu homology domain39.800.6790
42 Mapoly0003s0273 [PF02769] AIR synthase related protein, C-terminal domain; [PTHR10520] TRIFUNCTIONAL PURINE BIOSYNTHETIC PROTEIN ADENOSINE-3-RELATED; [6.3.3.1] Phosphoribosylformylglycinamidine cyclo-ligase.; [K01933] phosphoribosylformylglycinamidine cyclo-ligase [EC:6.3.3.1]; [PF00586] AIR synthase related protein, N-terminal domain; [GO:0003824] catalytic activity; [PTHR10520:SF22] PHOSPHORIBOSYLGLYCINAMIDE FORMYLTRANSFERASE40.150.7873
43 Mapoly0038s0028 [6.3.4.5] Argininosuccinate synthase.; [GO:0005524] ATP binding; [PF00764] Arginosuccinate synthase; [GO:0004055] argininosuccinate synthase activity; [GO:0006526] arginine biosynthetic process; [PTHR11587] ARGININOSUCCINATE SYNTHASE; [KOG1706] Argininosuccinate synthase; [K01940] argininosuccinate synthase [EC:6.3.4.5]40.210.7895
44 Mapoly0040s0008 [GO:0019867] outer membrane; [PTHR12815] SORTING AND ASSEMBLY MACHINERY (SAM50) PROTEIN; [PF07244] Surface antigen variable number repeat; [PF01103] Surface antigen40.990.7946
45 Mapoly0070s0010 [PTHR10721] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM44; [PF04280] Tim44-like domain; [KOG2580] Mitochondrial import inner membrane translocase, subunit TIM4441.120.7464
46 Mapoly0146s0035 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF03141] Putative S-adenosyl-L-methionine-dependent methyltransferase42.850.7290
47 Mapoly0099s0028 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0360] Chaperonin complex component, TCP-1 alpha subunit (CCT1)44.730.7709
48 Mapoly0148s0006 [PF07890] Rrp15p; [PTHR13245] FAMILY NOT NAMED44.900.8059
49 Mapoly0010s0191 [PF04055] Radical SAM superfamily; [PTHR13930] RSAFD1-RELATED; [PF00258] Flavodoxin; [PF08608] Wyosine base formation; [GO:0016491] oxidoreductase activity; [PTHR13930:SF0] SUBFAMILY NOT NAMED; [GO:0003824] catalytic activity; [GO:0051536] iron-sulfur cluster binding; [KOG1160] Fe-S oxidoreductase; [GO:0010181] FMN binding45.110.7851
50 Mapoly0010s0185 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10169] DNA TOPOISOMERASE/GYRASE; [K02469] DNA gyrase subunit A [EC:5.99.1.3]; [GO:0006265] DNA topological change; [GO:0003918] DNA topoisomerase type II (ATP-hydrolyzing) activity; [PF00521] DNA gyrase/topoisomerase IV, subunit A; [GO:0005694] chromosome; [KOG0355] DNA topoisomerase type II; [GO:0003916] DNA topoisomerase activity; [PF03989] DNA gyrase C-terminal domain, beta-propeller; [5.99.1.3] DNA topoisomerase (ATP-hydrolyzing).45.830.7823
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