Guide Gene
- Gene ID
- Mapoly0061s0020
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PTHR21576:SF2] UNCHARACTERIZED NODULIN-LIKE PROTEIN; [PF08161] NUC173 domain; [KOG1248] Uncharacterized conserved protein; [PTHR21576] UNCHARACTERIZED NODULIN-LIKE PROTEIN
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0061s0020 [PTHR21576:SF2] UNCHARACTERIZED NODULIN-LIKE PROTEIN; [PF08161] NUC173 domain; [KOG1248] Uncharacterized conserved protein; [PTHR21576] UNCHARACTERIZED NODULIN-LIKE PROTEIN 0.00 1.0000 1 Mapoly0040s0120 [PTHR12858] RIBOSOME BIOGENESIS PROTEIN; [KOG1951] GTP-binding protein AARP2 involved in 40S ribosome biogenesis; [GO:0042254] ribosome biogenesis; [PTHR12858:SF2] RIBOSOME BIOGENESIS PROTEIN BMS1; [GO:0005634] nucleus; [PF08142] AARP2CN (NUC121) domain; [K14569] ribosome biogenesis protein BMS1; [PF04950] Protein of unknown function (DUF663) 2.24 0.9164 2 Mapoly0089s0014 [PTHR24072:SF73] SUBFAMILY NOT NAMED; [KOG1707] Predicted Ras related/Rac-GTP binding protein; [PF08355] EF hand associated; [GO:0007264] small GTPase mediated signal transduction; [PF08356] EF hand associated; [PTHR24072] RHO FAMILY GTPASE; [GO:0005622] intracellular; [GO:0005525] GTP binding; [PF08477] Miro-like protein 3.32 0.8681 3 Mapoly0054s0075 [PTHR17695] UNCHARACTERIZED; [PTHR17695:SF11] SUBFAMILY NOT NAMED; [PF07539] Down-regulated in metastasis; [KOG1823] DRIM (Down-regulated in metastasis)-like proteins 3.46 0.9154 4 Mapoly0029s0100 [PF13513] HEAT-like repeat; [PF03810] Importin-beta N-terminal domain; [KOG2171] Karyopherin (importin) beta 3; [GO:0006886] intracellular protein transport; [GO:0008536] Ran GTPase binding; [PTHR10527:SF6] IMPORTIN-4 (IMPORTIN-4B)(RAN-BINDING PROTEIN 4); [PTHR10527] IMPORTIN BETA; [PF13646] HEAT repeats 3.61 0.8678 5 Mapoly0053s0083 [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [KOG0262] RNA polymerase I, large subunit; [PF05000] RNA polymerase Rpb1, domain 4; [GO:0008270] zinc ion binding; [GO:0005634] nucleus; [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [K02999] DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]; [GO:0003899] DNA-directed RNA polymerase activity; [PF04983] RNA polymerase Rpb1, domain 3; [2.7.7.6] DNA-directed RNA polymerase.; [PTHR19376:SF11] DNA-DIRECTED RNA POLYMERASE I LARGEST SUBUNIT 4.90 0.9147 6 Mapoly0015s0081 [PF11707] Ribosome 60S biogenesis N-terminal; [PTHR13500] NUCLEOLAR PRERIBOSOMAL-ASSOCIATED PROTEIN 1 5.66 0.8952 7 Mapoly0061s0134 [PTHR12687] NUCLEOLAR COMPLEX 2 AND RAD4-RELATED; [KOG2256] Predicted protein involved in nuclear export of pre-ribosomes; [PF03715] Noc2p family; [PTHR12687:SF4] YEAST NUCLEOLAR COMPLEX 2 5.92 0.8931 8 Mapoly0102s0020 [GO:0005524] ATP binding; [PTHR19211] ATP-BINDING TRANSPORT PROTEIN-RELATED; [GO:0016887] ATPase activity; [KOG0062] ATPase component of ABC transporters with duplicated ATPase domains/Translation elongation factor EF-3b; [K06158] ATP-binding cassette, sub-family F, member 3; [PF12848] ABC transporter; [PF00005] ABC transporter 6.32 0.8682 9 Mapoly1100s0003 [GO:0005524] ATP binding; [PTHR10046:SF23] LON PROTEASE HOMOLOG, MITOCHONDRIAL; [GO:0004176] ATP-dependent peptidase activity; [GO:0004252] serine-type endopeptidase activity; [PF02190] ATP-dependent protease La (LON) domain; [GO:0030163] protein catabolic process; [PTHR10046] ATP DEPENDENT LON PROTEASE FAMILY MEMBER; [GO:0006508] proteolysis 9.70 0.8093 10 Mapoly0125s0016 [GO:0005737] cytoplasm; [GO:0009058] biosynthetic process; [K01892] histidyl-tRNA synthetase [EC:6.1.1.21]; [GO:0016841] ammonia-lyase activity; [PF00221] Aromatic amino acid lyase; [PTHR11476:SF1] HISTIDYL-TRNA SYNTHETASE; [PF03129] Anticodon binding domain; [PTHR11476] HISTIDYL-TRNA SYNTHETASE; [PF13393] Histidyl-tRNA synthetase; [KOG1936] Histidyl-tRNA synthetase; [6.1.1.21] Histidine--tRNA ligase. 10.10 0.8844 11 Mapoly0079s0051 [PF13414] TPR repeat; [K00670] peptide alpha-N-acetyltransferase [EC:2.3.1.88]; [KOG1156] N-terminal acetyltransferase; [2.3.1.88] Peptide alpha-N-acetyltransferase.; [PTHR22767:SF2] N-TERMINAL ACETLYTRANSFERASE-RELATED; [PF12569] NMDA receptor-regulated protein 1; [PTHR22767] N-TERMINAL ACETLYTRANSFERASE-RELATED 11.31 0.8558 12 Mapoly0006s0259 [PTHR10527:SF5] IMPORTIN-5 (IMPORTIN SUBUNIT BETA-3); [KOG2171] Karyopherin (importin) beta 3; [GO:0005515] protein binding; [PF02985] HEAT repeat; [PTHR10527] IMPORTIN BETA; [PF13646] HEAT repeats 12.00 0.8499 13 Mapoly0014s0213 [KOG1991] Nuclear transport receptor RANBP7/RANBP8 (importin beta superfamily); [PF08506] Cse1; [PF03810] Importin-beta N-terminal domain; [GO:0005515] protein binding; [PF03378] CAS/CSE protein, C-terminus; [PTHR10997:SF18] IMPORTIN 7, 8 (IMP7, 8) (RAN-BINDING PROTEIN 7, 8); [GO:0006886] intracellular protein transport; [PTHR10997] IMPORTIN-7, 8, 11; [GO:0008536] Ran GTPase binding 12.25 0.7823 14 Mapoly0009s0044 [GO:0003676] nucleic acid binding; [PTHR24622] FAMILY NOT NAMED; [K14573] nucleolar protein 4; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [KOG0127] Nucleolar protein fibrillarin NOP77 (RRM superfamily) 12.96 0.8814 15 Mapoly0075s0033 - 13.42 0.8701 16 Mapoly0027s0074 [PTHR23111] ZINC FINGER PROTEIN; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others; [KOG4198] RNA-binding Ran Zn-finger protein and related proteins 14.28 0.8678 17 Mapoly0103s0007 [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [GO:0003924] GTPase activity; [K03267] G1 to S phase transition protein; [PTHR23115] TRANSLATION FACTOR; [PTHR23115:SF36] EUKARYOTIC PEPTIDE CHAIN RELEASE FACTOR GTP-BINDING SUBUNIT (ERF2) (TRANSLATION RELEASE FACTOR 3) (ERF3) (ERF-3); [KOG0459] Polypeptide release factor 3; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2 16.43 0.8031 18 Mapoly0119s0018 [PTHR12858] RIBOSOME BIOGENESIS PROTEIN; [PTHR12858:SF1] RIBOSOME BIOGENESIS PROTEIN TSR1 (20S RRNA ACCUMULATION PROTEIN 1); [GO:0042254] ribosome biogenesis; [GO:0005634] nucleus; [PF08142] AARP2CN (NUC121) domain; [KOG1980] Uncharacterized conserved protein; [PF04950] Protein of unknown function (DUF663) 16.73 0.8718 19 Mapoly0045s0011 [GO:0005524] ATP binding; [6.1.1.10] Methionine--tRNA ligase.; [GO:0000166] nucleotide binding; [PF01588] Putative tRNA binding domain; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [GO:0000049] tRNA binding; [PF09334] tRNA synthetases class I (M); [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity; [K01874] methionyl-tRNA synthetase [EC:6.1.1.10]; [KOG1247] Methionyl-tRNA synthetase 18.57 0.8402 20 Mapoly0049s0043 [PTHR15682] FAMILY NOT NAMED; [PF10441] Urb2/Npa2 family 19.44 0.8621 21 Mapoly0015s0089 [GO:0005524] ATP binding; [KOG0335] ATP-dependent RNA helicase; [3.6.4.13] RNA helicase.; [K11594] ATP-dependent RNA helicase [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PTHR24031:SF9] HELICASE CONSERVED C-TERMINAL DOMAIN, PUTATIVE; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 19.62 0.8021 22 Mapoly0007s0098 [GO:0005524] ATP binding; [KOG0742] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23075] PUTATIVE ATP-ASE; [PF12037] Domain of unknown function (DUF3523) 20.40 0.8330 23 Mapoly0023s0025 [GO:0016876] ligase activity, forming aminoacyl-tRNA and related compounds; [PF00749] tRNA synthetases class I (E and Q), catalytic domain; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [PF14497] Glutathione S-transferase, C-terminal domain; [GO:0000166] nucleotide binding; [GO:0043039] tRNA aminoacylation; [PF03950] tRNA synthetases class I (E and Q), anti-codon binding domain; [KOG1147] Glutamyl-tRNA synthetase; [6.1.1.17] Glutamate--tRNA ligase.; [PTHR10119:SF15] GLUTAMINYL-TRNA SYNTHETASE; [PTHR10119] GLUTAMYL/GLUTAMINYL-TRNA SYNTHETASE; [GO:0006418] tRNA aminoacylation for protein translation; [K01885] glutamyl-tRNA synthetase [EC:6.1.1.17]; [GO:0004812] aminoacyl-tRNA ligase activity 21.49 0.8426 24 Mapoly0016s0170 [PF13513] HEAT-like repeat; [PF03810] Importin-beta N-terminal domain; [GO:0006886] intracellular protein transport; [GO:0008536] Ran GTPase binding; [PTHR10527] IMPORTIN BETA; [KOG1241] Karyopherin (importin) beta 1; [K14293] importin subunit beta-1 23.87 0.8196 25 Mapoly0090s0088 [KOG0338] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [3.6.4.13] RNA helicase.; [K13181] ATP-dependent RNA helicase DDX27 [EC:3.6.4.13]; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF93] PREDICTED PROTEIN (FRAGMENT) 25.08 0.8513 26 Mapoly0126s0034 [GO:0005524] ATP binding; [6.3.5.5] Carbamoyl-phosphate synthase (glutamine-hydrolyzing).; [K01955] carbamoyl-phosphate synthase large subunit [EC:6.3.5.5]; [KOG0370] Multifunctional pyrimidine synthesis protein CAD (includes carbamoyl-phophate synthetase, aspartate transcarbamylase, and glutamine amidotransferase); [PF00289] Carbamoyl-phosphate synthase L chain, N-terminal domain; [PF02142] MGS-like domain; [GO:0008152] metabolic process; [PTHR11405] CARBAMOYLTRANSFERASE RELATED; [PF02787] Carbamoyl-phosphate synthetase large chain, oligomerisation domain; [GO:0003824] catalytic activity; [PF02786] Carbamoyl-phosphate synthase L chain, ATP binding domain 25.24 0.8073 27 Mapoly0013s0047 [KOG2147] Nucleolar protein involved in 40S ribosome biogenesis; [PTHR23183:SF0] SUBFAMILY NOT NAMED; [PTHR23183] NOP14; [PF03715] Noc2p family; [GO:0032040] small-subunit processome; [PF04147] Nop14-like family 25.98 0.8559 28 Mapoly0006s0183 [PF03465] eRF1 domain 3; [KOG0688] Peptide chain release factor 1 (eRF1); [K03265] peptide chain release factor eRF subunit 1; [GO:0005737] cytoplasm; [PF03463] eRF1 domain 1; [PTHR10113] PEPTIDE CHAIN RELEASE FACTOR SUBUNIT 1; [PF03464] eRF1 domain 2; [GO:0006415] translational termination; [GO:0016149] translation release factor activity, codon specific 26.83 0.7763 29 Mapoly0023s0075 [GO:0006355] regulation of transcription, DNA-dependent; [PF00847] AP2 domain; [PTHR31190] FAMILY NOT NAMED; [GO:0003700] sequence-specific DNA binding transcription factor activity 28.39 0.7954 30 Mapoly0020s0016 [PTHR13102:SF0] SUBFAMILY NOT NAMED; [PTHR13102] PROTEIN C14ORF21; [KOG2188] Predicted RNA-binding protein, contains Pumilio domains 28.58 0.8490 31 Mapoly0153s0002 [GO:0005524] ATP binding; [GO:0000166] nucleotide binding; [PF08264] Anticodon-binding domain of tRNA; [6.1.1.4] Leucine--tRNA ligase.; [PTHR11946] ISOLEUCYL, LEUCYL, TYROSYL, VALYL AND METHIONYL-TRNA SYNTHETASES; [K01869] leucyl-tRNA synthetase [EC:6.1.1.4]; [PF00133] tRNA synthetases class I (I, L, M and V); [KOG0437] Leucyl-tRNA synthetase; [GO:0006418] tRNA aminoacylation for protein translation; [GO:0004812] aminoacyl-tRNA ligase activity 28.98 0.8216 32 Mapoly0043s0008 [PTHR13457:SF1] gb def: part of small (ribosomal) subunit (ssu) processosome (contains u3 snorna), utp10; [PF12397] U3 small nucleolar RNA-associated protein 10; [PTHR13457] BAP28; [PF08146] BP28CT (NUC211) domain; [K14550] U3 small nucleolar RNA-associated protein 10 29.15 0.8336 33 Mapoly0060s0020 [K14544] U3 small nucleolar RNA-associated protein 22; [KOG2054] Nucleolar RNA-associated protein (NRAP); [PTHR17972] NUCLEOLAR RNA-ASSOCIATED PROTEIN; [PF03813] Nrap protein 30.33 0.8455 34 Mapoly0114s0007 [KOG0724] Zuotin and related molecular chaperones (DnaJ superfamily), contains DNA-binding domains; [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PF00226] DnaJ domain; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [K09522] DnaJ homolog subfamily C member 2 31.81 0.7666 35 Mapoly0207s0007 [PTHR14387:SF0] SUBFAMILY NOT NAMED; [PTHR14387] THADA/DEATH RECEPTOR INTERACTING PROTEIN; [PF10350] Putative death-receptor fusion protein (DUF2428) 32.74 0.7442 36 Mapoly0032s0003 [PF05178] KRI1-like family; [KOG2409] KRR1-interacting protein involved in 40S ribosome biogenesis; [PTHR14490] ZINC FINGER, ZZ TYPE; [PF12936] KRI1-like family C-terminal 33.47 0.8303 37 Mapoly0009s0077 [PTHR14927:SF0] SUBFAMILY NOT NAMED; [KOG2321] WD40 repeat protein; [PTHR14927] UNCHARACTERIZED; [GO:0005634] nucleus; [PF08159] NUC153 domain 33.82 0.8419 38 Mapoly0131s0026 [GO:0003677] DNA binding; [K13211] GC-rich sequence DNA-binding factor; [GO:0006355] regulation of transcription, DNA-dependent; [PF07842] GC-rich sequence DNA-binding factor-like protein; [PTHR12214] GC-RICH SEQUENCE DNA-BINDING FACTOR; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [PTHR12214:SF0] SUBFAMILY NOT NAMED 34.58 0.8060 39 Mapoly0076s0020 [GO:0005524] ATP binding; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0342] ATP-dependent RNA helicase pitchoune; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding 35.11 0.7429 40 Mapoly0003s0297 [GO:0005524] ATP binding; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [KOG0342] ATP-dependent RNA helicase pitchoune; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K13179] ATP-dependent RNA helicase DDX18/HAS1 [EC:3.6.4.13]; [PF13959] Domain of unknown function (DUF4217) 36.37 0.8306 41 Mapoly0039s0093 [GO:0003677] DNA binding; [GO:0006260] DNA replication; [PTHR10133] DNA POLYMERASE I; [K02335] DNA polymerase I [EC:2.7.7.7]; [GO:0008408] 3'-5' exonuclease activity; [2.7.7.7] DNA-directed DNA polymerase.; [PF01612] 3'-5' exonuclease; [PF00476] DNA polymerase family A; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [GO:0003887] DNA-directed DNA polymerase activity 37.63 0.7981 42 Mapoly0136s0021 [PTHR13213] DNA POLYMERASE V RELATED; [GO:0003677] DNA binding; [PF04931] DNA polymerase phi; [2.7.7.7] DNA-directed DNA polymerase.; [PTHR13213:SF2] DNA POLYMERASE V; [GO:0006351] transcription, DNA-dependent; [GO:0003887] DNA-directed DNA polymerase activity; [K02331] DNA polymerase phi subunit [EC:2.7.7.7] 37.63 0.8343 43 Mapoly0047s0077 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 38.88 0.7476 44 Mapoly0061s0018 [KOG2318] Uncharacterized conserved protein; [GO:0005634] nucleus; [PF08159] NUC153 domain; [PTHR12202] UNCHARACTERIZED 38.88 0.7726 45 Mapoly0025s0073 [PTHR17605] RIBOSOME BIOGENESIS PROTEIN BOP1 (BLOCK OF PROLIFERATION 1 PROTEIN); [GO:0005515] protein binding; [GO:0006364] rRNA processing; [KOG0650] WD40 repeat nucleolar protein Bop1, involved in ribosome biogenesis; [PF00400] WD domain, G-beta repeat; [PF08145] BOP1NT (NUC169) domain 39.60 0.8258 46 Mapoly0004s0145 [PTHR24012] FAMILY NOT NAMED; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) 39.94 0.8278 47 Mapoly0003s0296 [GO:0008408] 3'-5' exonuclease activity; [PF01612] 3'-5' exonuclease; [3.1.13.-] Exoribonucleases producing 5'-phosphomonoesters.; [GO:0005622] intracellular; [K12591] exosome complex exonuclease RRP6 [EC:3.1.13.-]; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [PTHR12124] POLYMYOSITIS/SCLERODERMA AUTOANTIGEN-RELATED; [PF00570] HRDC domain 42.04 0.8258 48 Mapoly0156s0024 [PF08506] Cse1; [PF03810] Importin-beta N-terminal domain; [GO:0005515] protein binding; [KOG1992] Nuclear export receptor CSE1/CAS (importin beta superfamily); [PTHR10997:SF8] IMPORTIN-ALPHA RE-EXPORTER (CHROMOSOME SEGREGATION 1-LIKE PROTEIN); [PF03378] CAS/CSE protein, C-terminus; [GO:0006886] intracellular protein transport; [PTHR10997] IMPORTIN-7, 8, 11; [GO:0008536] Ran GTPase binding 43.50 0.7187 49 Mapoly0012s0035 [PTHR14150] U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14; [K14567] U3 small nucleolar RNA-associated protein 14; [PF04615] Utp14 protein; [KOG2172] Uncharacterized conserved protein; [GO:0006364] rRNA processing; [PTHR14150:SF12] U3 SMALL NUCLEOLAR RNA-ASSOCIATED PROTEIN 14; [GO:0032040] small-subunit processome 44.09 0.8216 50 Mapoly0035s0137 [GO:0005643] nuclear pore; [PTHR10350:SF6] NUCLEOPORIN 155; [PF03177] Non-repetitive/WGA-negative nucleoporin C-terminal; [K14312] nuclear pore complex protein Nup155; [KOG1900] Nuclear pore complex, Nup155 component (D Nup154, sc Nup157/Nup170); [GO:0006913] nucleocytoplasmic transport; [PF08801] Nup133 N terminal like; [GO:0017056] structural constituent of nuclear pore; [PTHR10350] NUCLEAR PORE COMPLEX PROTEIN NUP155 44.72 0.8136