Guide Gene
- Gene ID
- Mapoly0003s0175
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [KOG1105] Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1; [PF07500] Transcription factor S-II (TFIIS), central domain; [GO:0008270] zinc ion binding; [PTHR11477] TRANSCRIPTION ELONGATION FACTOR S-II; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [K03145] transcription elongation factor S-II; [PF01096] Transcription factor S-II (TFIIS)
Coexpressed Gene List
Search : Show :Showing 1 to 50 of 200 records
Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0003s0175 [KOG1105] Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1; [PF07500] Transcription factor S-II (TFIIS), central domain; [GO:0008270] zinc ion binding; [PTHR11477] TRANSCRIPTION ELONGATION FACTOR S-II; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [K03145] transcription elongation factor S-II; [PF01096] Transcription factor S-II (TFIIS) 0.00 1.0000 1 Mapoly0095s0037 [PTHR14003:SF1] YY1-RELATED; [PF13465] Zinc-finger double domain; [PTHR14003] TRANSCRIPTIONAL REPRESSOR PROTEIN YY; [PF13894] C2H2-type zinc finger 1.41 0.7903 2 Mapoly0098s0012 [PTHR23147] SERINE/ARGININE RICH SPLICING FACTOR; [KOG0126] Predicted RNA-binding protein (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 5.20 0.7800 3 Mapoly0039s0094 [PTHR15856] PHD FINGER PROTEIN 20-RELATED; [KOG1844] PHD Zn-finger proteins 6.32 0.7788 4 Mapoly0021s0143 - 7.07 0.7895 5 Mapoly0007s0146 [KOG4374] RNA-binding protein Bicaudal-C; [PTHR15457] SEC-23 INTERACTING PROTEIN P125; [PF00536] SAM domain (Sterile alpha motif) 7.35 0.7631 6 Mapoly0135s0033 [PF07093] SGT1 protein; [KOG2406] MADS box transcription factor; [PTHR13060] SGT1 PROTEIN (HSGT1) (SUPPRESSOR OF GCR2) 7.35 0.7743 7 Mapoly0001s0121 [PF00641] Zn-finger in Ran binding protein and others; [PTHR23238] RNA BINDING PROTEIN; [KOG1995] Conserved Zn-finger protein; [GO:0008270] zinc ion binding 8.37 0.7788 8 Mapoly0052s0032 [GO:0006333] chromatin assembly or disassembly; [PF04729] ASF1 like histone chaperone; [K10753] histone chaperone ASF1; [PTHR12040] ANTI-SILENCING PROTEIN 1; [GO:0005634] nucleus 12.96 0.7541 9 Mapoly0006s0154 - 14.87 0.7575 10 Mapoly0117s0022 [KOG3467] Histone H4; [GO:0003677] DNA binding; [PTHR10484] HISTONE H4; [K11254] histone H4; [PF00125] Core histone H2A/H2B/H3/H4 15.81 0.7330 11 Mapoly0187s0004 [KOG0533] RRM motif-containing protein; [PTHR15241] TRANSFORMER-2-RELATED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 16.43 0.7610 12 Mapoly0013s0143 [GO:0003723] RNA binding; [PF05634] APO RNA-binding; [PTHR10388] EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 17.55 0.6904 13 Mapoly0003s0077 [PTHR15606:SF3] HSP40-RELATED; [KOG4188] Uncharacterized conserved protein; [PF00226] DnaJ domain; [PTHR15606] DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED; [PF12572] Protein of unknown function (DUF3752) 18.73 0.7152 14 Mapoly0062s0031 - 18.97 0.7641 15 Mapoly0051s0027 [GO:0003677] DNA binding; [PF02178] AT hook motif 20.78 0.7111 16 Mapoly0009s0067 [PTHR31789] FAMILY NOT NAMED 21.49 0.7586 17 Mapoly0159s0017 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR10032] ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF13837] Myb/SANT-like DNA-binding domain 22.05 0.7458 18 Mapoly0023s0090 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR22929] RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B; [PTHR22929:SF0] SUBFAMILY NOT NAMED 22.18 0.7580 19 Mapoly0001s0525 [K14408] cleavage stimulation factor subunit 3; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [KOG1914] mRNA cleavage and polyadenylation factor I complex, subunit RNA14; [PTHR19980] RNA CLEAVAGE STIMULATION FACTOR; [PF05843] Suppressor of forked protein (Suf) 24.10 0.7674 20 Mapoly0188s0017 [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 26.50 0.7297 21 Mapoly0035s0096 [PF01426] BAH domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR 26.55 0.7537 22 Mapoly0037s0072 [GO:0005515] protein binding; [PTHR21712] UNCHARACTERIZED; [PF00498] FHA domain 27.13 0.7399 23 Mapoly0001s0557 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [K06173] tRNA pseudouridine synthase A [EC:5.4.99.12]; [GO:0001522] pseudouridine synthesis; [KOG2553] Pseudouridylate synthase; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity; [5.4.99.12] tRNA pseudouridine(38-40) synthase. 28.14 0.7405 24 Mapoly0024s0122 [PTHR30060] INNER MEMBRANE PROTEIN; [PF09745] Coiled-coil domain-containing protein 55 (DUF2040); [PTHR30060:SF0] INNER MEMBRANE PROTEIN 28.64 0.6875 25 Mapoly0035s0095 [GO:0003677] DNA binding; [PF00538] linker histone H1 and H5 family; [GO:0000786] nucleosome; [GO:0005634] nucleus; [PTHR11467] HISTONE H1/H5; [GO:0006334] nucleosome assembly; [K11275] histone H1/5 30.50 0.7241 26 Mapoly0114s0034 [GO:0003723] RNA binding; [KOG1588] RNA-binding protein Sam68 and related KH domain proteins; [PF00013] KH domain; [PTHR11208] RNA-BINDING PROTEIN RELATED 32.56 0.7425 27 Mapoly0160s0022 [PF06592] Protein of unknown function (DUF1138) 33.44 0.7309 28 Mapoly0001s0483 [PTHR31447] FAMILY NOT NAMED; [KOG4176] Uncharacterized conserved protein; [PF13532] 2OG-Fe(II) oxygenase superfamily 33.47 0.7258 29 Mapoly0137s0008 [PF06278] Protein of unknown function (DUF1032); [PTHR14324] FAMILY NOT NAMED; [PTHR14324:SF3] SUBFAMILY NOT NAMED; [K11490] condensin-2 complex subunit H2; [KOG2359] Uncharacterized conserved protein 34.18 0.7506 30 Mapoly0033s0025 [PTHR31169] FAMILY NOT NAMED; [PF10497] Zinc-finger domain of monoamine-oxidase A repressor R1 35.71 0.6921 31 Mapoly0052s0047 [PF03556] Cullin binding; [PTHR12281] RP42 RELATED 37.34 0.7197 32 Mapoly0105s0008 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H4 38.42 0.7144 33 Mapoly0038s0053 [PTHR23139] RNA-BINDING PROTEIN; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG0120] Splicing factor U2AF, large subunit (RRM superfamily); [GO:0003676] nucleic acid binding; [PTHR23139:SF9] SPLICING FACTOR U2AF LARGE SUBUNIT; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 40.19 0.7461 34 Mapoly0037s0121 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain) 43.08 0.7242 35 Mapoly0013s0183 [KOG2739] Leucine-rich acidic nuclear protein; [PF14580] Leucine-rich repeat; [PTHR11375] ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 32 46.65 0.7213 36 Mapoly0158s0018 [PTHR21442:SF0] SUBFAMILY NOT NAMED; [PTHR21442] UNCHARACTERIZED; [PF12018] Domain of unknown function (DUF3508) 48.50 0.6519 37 Mapoly0011s0128 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 49.14 0.7407 38 Mapoly0033s0067 [KOG2611] Neurochondrin/leucine-rich protein (Neurochondrin); [PTHR13109] NEUROCHONDRIN; [PF05536] Neurochondrin 49.19 0.7131 39 Mapoly0103s0074 [PTHR23117] GUANYLATE KINASE-RELATED; [GO:0005515] protein binding; [PF00625] Guanylate kinase; [KOG0707] Guanylate kinase; [2.7.4.8] Guanylate kinase.; [K00942] guanylate kinase [EC:2.7.4.8] 49.93 0.6167 40 Mapoly0001s0028 [KOG1659] Class 2 transcription repressor NC2, alpha subunit (DRAP1); [GO:0005622] intracellular; [GO:0043565] sequence-specific DNA binding; [PTHR10252:SF5] DR1-ASSOCIATED COREPRESSOR; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR10252] HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED 51.09 0.7040 41 Mapoly0015s0045 [KOG0533] RRM motif-containing protein; [PTHR19965] RNA AND EXPORT FACTOR BINDING PROTEIN; [K12881] THO complex subunit 4; [PF13865] C-terminal duplication domain of Friend of PRMT1; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 53.89 0.7197 42 Mapoly0059s0065 [GO:0008270] zinc ion binding; [PF07496] CW-type Zinc Finger 54.67 0.7107 43 Mapoly0008s0063 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0005515] protein binding; [PF04433] SWIRM domain; [GO:0016491] oxidoreductase activity; [K11450] lysine-specific histone demethylase 1 [EC:1.-.-.-]; [KOG0029] Amine oxidase; [1.-.-.-] Oxidoreductases. 56.50 0.7454 44 Mapoly0120s0009 - 61.77 0.6729 45 Mapoly0003s0275 [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0046872] metal ion binding; [PTHR10825] RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT 63.83 0.7143 46 Mapoly0173s0011 [PF00183] Hsp90 protein; [GO:0005524] ATP binding; [GO:0006950] response to stress; [KOG0020] Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0006457] protein folding; [K04079] molecular chaperone HtpG; [PTHR11528] HEAT SHOCK PROTEIN 90; [GO:0051082] unfolded protein binding 65.41 0.7219 47 Mapoly0043s0023 [PF04641] Rtf2 RING-finger; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR12775] PROTEIN C20ORF43 HOMOLOG; [KOG3113] Uncharacterized conserved protein 65.88 0.7020 48 Mapoly0016s0006 [PTHR19923] WD40 REPEAT PROTEINPRL1/PRL2-RELATED; [PTHR19923:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [K12862] pleiotropic regulator 1; [KOG0285] Pleiotropic regulator 1; [PF00400] WD domain, G-beta repeat 66.36 0.7174 49 Mapoly0080s0056 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PF00493] MCM2/3/5 family; [K10738] minichromosome maintenance protein 9; [PTHR11630:SF48] DNA REPLICATION LICENSING FACTOR MCM1; [PTHR11630] DNA REPLICATION LICENSING FACTOR; [KOG0477] DNA replication licensing factor, MCM2 component 66.51 0.6897 50 Mapoly0054s0019 [PTHR16105:SF0] SUBFAMILY NOT NAMED; [PTHR16105] UNCHARACTERIZED; [GO:0003676] nucleic acid binding; [K13157] U11/U12 small nuclear ribonucleoprotein 65 kDa protein; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 67.23 0.7148