Guide Gene

Gene ID
Mapoly0011s0128
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family

Coexpressed Gene List

Search : Show :

Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0011s0128 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 0.00 1.0000
1 Mapoly0001s0312 [PF13837] Myb/SANT-like DNA-binding domain2.240.8275
2 Mapoly0023s0090 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR22929] RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B; [PTHR22929:SF0] SUBFAMILY NOT NAMED2.450.8382
3 Mapoly0047s0022 [PF00782] Dual specificity phosphatase, catalytic domain; [K01104] protein-tyrosine phosphatase [EC:3.1.3.48]; [GO:0006470] protein dephosphorylation; [PTHR23339] TYROSINE SPECIFIC PROTEIN PHOSPHATASE AND DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity; [3.1.3.48] Protein-tyrosine-phosphatase.; [PTHR23339:SF25] DUAL SPECIFICITY PROTEIN PHOSPHATASE2.830.8428
4 Mapoly0001s0482 [PF05764] YL1 nuclear protein; [KOG2897] DNA-binding protein YL1 and related proteins; [GO:0006355] regulation of transcription, DNA-dependent; [PF08265] YL1 nuclear protein C-terminal domain; [K11664] vacuolar protein sorting-associated protein 72; [GO:0005634] nucleus; [PTHR13275] YL-1 PROTEIN (TRANSCRIPTION FACTOR-LIKE 1)3.320.8502
5 Mapoly0007s0176 [GO:0005847] mRNA cleavage and polyadenylation specificity factor complex; [K14402] cleavage and polyadenylation specificity factor subunit 2; [GO:0006378] mRNA polyadenylation; [KOG1135] mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit); [PF07521] RNA-metabolising metallo-beta-lactamase; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [PF13299] Cleavage and polyadenylation factor 2 C-terminal; [PTHR11203:SF5] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 100 KDA SUBUNIT; [PF10996] Beta-Casp domain; [GO:0006379] mRNA cleavage3.740.8212
6 Mapoly0054s0019 [PTHR16105:SF0] SUBFAMILY NOT NAMED; [PTHR16105] UNCHARACTERIZED; [GO:0003676] nucleic acid binding; [K13157] U11/U12 small nuclear ribonucleoprotein 65 kDa protein; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)4.240.8179
7 Mapoly0095s0037 [PTHR14003:SF1] YY1-RELATED; [PF13465] Zinc-finger double domain; [PTHR14003] TRANSCRIPTIONAL REPRESSOR PROTEIN YY; [PF13894] C2H2-type zinc finger5.000.7957
8 Mapoly0135s0033 [PF07093] SGT1 protein; [KOG2406] MADS box transcription factor; [PTHR13060] SGT1 PROTEIN (HSGT1) (SUPPRESSOR OF GCR2)7.140.7990
9 Mapoly0002s0134 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process8.000.7996
10 Mapoly0035s0066 [PF10699] Male gamete fusion factor; [KOG2812] Uncharacterized conserved protein; [PTHR31764:SF0] SUBFAMILY NOT NAMED; [PTHR31764] FAMILY NOT NAMED8.060.8071
11 Mapoly0119s0045 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [PTHR24115:SF194] SUBFAMILY NOT NAMED; [KOG0242] Kinesin-like protein; [GO:0005871] kinesin complex; [K10397] kinesin family member 6/9; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity8.120.8224
12 Mapoly0082s0082 -8.720.7977
13 Mapoly0002s0008 -9.380.7967
14 Mapoly0062s0031 -9.950.8118
15 Mapoly0114s0034 [GO:0003723] RNA binding; [KOG1588] RNA-binding protein Sam68 and related KH domain proteins; [PF00013] KH domain; [PTHR11208] RNA-BINDING PROTEIN RELATED10.390.7986
16 Mapoly0007s0177 -12.000.8111
17 Mapoly0001s0487 [PTHR16216:SF2] SUBFAMILY NOT NAMED; [PTHR16216] FAMILY NOT NAMED12.650.8309
18 Mapoly0014s0119 [GO:0006355] regulation of transcription, DNA-dependent; [K11308] histone acetyltransferase MYST1 [EC:2.3.1.48]; [PF11717] RNA binding activity-knot of a chromodomain; [PTHR10615] HISTONE ACETYLTRANSFERASE; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [GO:0005634] nucleus; [PF01853] MOZ/SAS family; [2.3.1.48] Histone acetyltransferase.; [KOG2747] Histone acetyltransferase (MYST family)13.710.7763
19 Mapoly0027s0068 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger)13.750.7915
20 Mapoly0061s0094 [GO:0005634] nucleus; [PTHR15217:SF0] SUBFAMILY NOT NAMED; [PTHR15217] WILMS' TUMOR 1-ASSOCIATING PROTEIN; [KOG2991] Splicing regulator; [GO:0048024] regulation of mRNA splicing, via spliceosome13.780.8134
21 Mapoly0025s0004 [GO:0009058] biosynthetic process; [K00654] serine palmitoyltransferase [EC:2.3.1.50]; [GO:0030170] pyridoxal phosphate binding; [PTHR13693] CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE; [2.3.1.50] Serine C-palmitoyltransferase.; [PF00155] Aminotransferase class I and II; [KOG1358] Serine palmitoyltransferase; [PTHR13693:SF2] SERINE PALMITOYLTRANSFERASE I13.860.7480
22 Mapoly0072s0079 [PF11717] RNA binding activity-knot of a chromodomain; [K11339] mortality factor 4-like protein 1; [GO:0005634] nucleus; [PTHR10880] MORTALITY FACTOR 4-LIKE PROTEIN; [PF05712] MRG13.860.8189
23 Mapoly0004s0141 [KOG4214] Myotrophin and similar proteins; [PTHR24188] ANKYRIN REPEAT PROTEIN; [PF12796] Ankyrin repeats (3 copies)14.970.7909
24 Mapoly0044s0100 [K03847] alpha-1,6-mannosyltransferase [EC:2.4.1.130]; [PTHR22760:SF1] GLYCOSYLTRANSFERASE; [KOG2516] Protein involved in dolichol pathway for N-glycosylation (mannosyltransferase family); [PF03901] Alg9-like mannosyltransferase family; [PTHR22760] GLYCOSYLTRANSFERASE; [2.4.1.130] Transferred entry: 2.4.1.258, 2.4.1.259, 2.4.1.260 and 2.4.1.261.; [GO:0016757] transferase activity, transferring glycosyl groups15.490.7884
25 Mapoly0038s0053 [PTHR23139] RNA-BINDING PROTEIN; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG0120] Splicing factor U2AF, large subunit (RRM superfamily); [GO:0003676] nucleic acid binding; [PTHR23139:SF9] SPLICING FACTOR U2AF LARGE SUBUNIT; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)15.970.8023
26 Mapoly0007s0033 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR21717] TELOMERIC REPEAT BINDING PROTEIN18.380.7941
27 Mapoly0060s0063 -19.440.7698
28 Mapoly0063s0071 [GO:0005515] protein binding; [K12176] COP9 signalosome complex subunit 2; [KOG1464] COP9 signalosome, subunit CSN2; [PF01399] PCI domain; [PTHR10678] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 219.620.7697
29 Mapoly0021s0143 -20.900.7965
30 Mapoly0036s0143 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [PF09273] Rubisco LSMT substrate-binding20.980.7783
31 Mapoly0051s0102 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [KOG0243] Kinesin-like protein; [GO:0005871] kinesin complex; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [K10395] kinesin family member 4/7/21/27; [GO:0003777] microtubule motor activity21.000.7969
32 Mapoly0069s0083 [K11662] actin-related protein 6; [PF00022] Actin; [PTHR11937:SF21] ACTIN-LIKE PROTEIN; [PTHR11937] ACTIN; [KOG0680] Actin-related protein - Arp6p21.000.7263
33 Mapoly0089s0068 [PTHR21683] UNCHARACTERIZED; [PF13863] Domain of unknown function (DUF4200); [PTHR21683:SF2] SUBFAMILY NOT NAMED21.450.7975
34 Mapoly0044s0042 [GO:0008270] zinc ion binding; [PF07967] C3HC zinc finger-like; [GO:0005634] nucleus; [PTHR15835] FAMILY NOT NAMED23.020.7719
35 Mapoly0207s0010 -23.490.7765
36 Mapoly0187s0004 [KOG0533] RRM motif-containing protein; [PTHR15241] TRANSFORMER-2-RELATED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)23.690.7846
37 Mapoly0024s0122 [PTHR30060] INNER MEMBRANE PROTEIN; [PF09745] Coiled-coil domain-containing protein 55 (DUF2040); [PTHR30060:SF0] INNER MEMBRANE PROTEIN24.860.7114
38 Mapoly0028s0083 [3.1.2.15] Ubiquitin thiolesterase.; [KOG0944] Ubiquitin-specific protease UBP14; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0005515] protein binding; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0008270] zinc ion binding; [K11836] ubiquitin carboxyl-terminal hydrolase 5/13 [EC:3.1.2.15]; [PF00627] UBA/TS-N domain; [PTHR24006] FAMILY NOT NAMED; [PF02148] Zn-finger in ubiquitin-hydrolases and other protein26.980.7692
39 Mapoly0104s0025 [PTHR21032] UNCHARACTERIZED; [PF01585] G-patch domain; [KOG1994] Predicted RNA binding protein, contains G-patch and Zn-finger domains; [GO:0003676] nucleic acid binding; [PF13821] Domain of unknown function (DUF4187)27.690.7659
40 Mapoly0006s0037 [PF03828] Cid1 family poly A polymerase; [KOG2277] S-M checkpoint control protein CID1 and related nucleotidyltransferases; [PTHR23092] TOPOISOMERASE-RELATED PROTEIN; [PF01909] Nucleotidyltransferase domain; [GO:0016779] nucleotidyltransferase activity; [PTHR23092:SF15] SUBFAMILY NOT NAMED28.500.8026
41 Mapoly0016s0079 [GO:0005524] ATP binding; [KOG2680] DNA helicase TIP49, TBP-interacting protein; [3.6.4.12] DNA helicase.; [PF06068] TIP49 C-terminus; [GO:0043141] ATP-dependent 5'-3' DNA helicase activity; [K11338] RuvB-like protein 2 [EC:3.6.4.12]; [GO:0003678] DNA helicase activity; [PTHR11093] RUVB-RELATED REPTIN AND PONTIN; [PTHR11093:SF2] RUVB-LIKE 2 (REPTIN)28.910.7813
42 Mapoly0159s0017 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR10032] ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF13837] Myb/SANT-like DNA-binding domain29.460.7653
43 Mapoly0052s0017 -29.930.7858
44 Mapoly0107s0007 [PF06839] GRF zinc finger; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [K10772] AP endonuclease 2 [EC:4.2.99.18]; [GO:0008270] zinc ion binding; [GO:0006281] DNA repair; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE30.030.7530
45 Mapoly0035s0058 -30.300.7447
46 Mapoly0005s0018 [KOG4508] Uncharacterized conserved protein; [PTHR15975] UNCHARACTERIZED; [PF10155] Uncharacterized conserved protein (DUF2363)30.850.7612
47 Mapoly0029s0028 [PF00249] Myb-like DNA-binding domain; [GO:0005515] protein binding; [PF00569] Zinc finger, ZZ type; [GO:0003682] chromatin binding; [GO:0008270] zinc ion binding; [PF04433] SWIRM domain; [PTHR12374] TRANSCRIPTIONAL ADAPTOR 2 (ADA2)-RELATED; [KOG0457] Histone acetyltransferase complex SAGA/ADA, subunit ADA2; [K11314] transcriptional adapter 2-alpha32.250.7723
48 Mapoly0052s0020 [K03424] TatD DNase family protein [EC:3.1.21.-]; [GO:0016888] endodeoxyribonuclease activity, producing 5'-phosphomonoesters; [KOG3020] TatD-related DNase; [3.1.21.-] Endodeoxyribonucleases producing 5'-phosphomonoesters.; [PF01026] TatD related DNase; [PTHR10060] TATD FAMILY DEOXYRIBONUCLEASE32.730.7728
49 Mapoly0032s0117 [PF06294] Domain of Unknown Function (DUF1042); [PTHR12509] SPERMATOGENESIS-ASSOCIATED 4-RELATED33.050.7789
50 Mapoly0093s0081 [PF10218] Uncharacterized conserved protein (DUF2054); [PF15024] Glycosyltransferase family 18; [PTHR13481] UNCHARACTERIZED33.440.7502
Showing 1 to 50 of 200 records
S