Guide Gene
- Gene ID
- Mapoly0107s0007
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [PF06839] GRF zinc finger; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [K10772] AP endonuclease 2 [EC:4.2.99.18]; [GO:0008270] zinc ion binding; [GO:0006281] DNA repair; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0107s0007 [PF06839] GRF zinc finger; [4.2.99.18] DNA-(apurinic or apyrimidinic site) lyase.; [K10772] AP endonuclease 2 [EC:4.2.99.18]; [GO:0008270] zinc ion binding; [GO:0006281] DNA repair; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE 0.00 1.0000 1 Mapoly0023s0060 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0004000] adenosine deaminase activity; [PTHR10910] EUKARYOTE SPECIFIC DSRNA BINDING PROTEIN; [PF02137] Adenosine-deaminase (editase) domain 2.00 0.7723 2 Mapoly0054s0116 [KOG0331] ATP-dependent RNA helicase; [GO:0005524] ATP binding; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [GO:0003676] nucleic acid binding 3.61 0.8056 3 Mapoly0047s0092 [PF00899] ThiF family; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [KOG2018] Predicted dinucleotide-utilizing enzyme involved in molybdopterin and thiamine biosynthesis; [GO:0003824] catalytic activity 6.93 0.7654 4 Mapoly0226s0007 [PF00817] impB/mucB/samB family; [2.7.7.7] DNA-directed DNA polymerase.; [GO:0006281] DNA repair; [PF11799] impB/mucB/samB family C-terminal domain; [PTHR11076] DNA REPAIR POLYMERASE UMUC / TRANSFERASE FAMILY MEMBER; [PTHR11076:SF11] DNA POLYMERASE ETA; [GO:0003887] DNA-directed DNA polymerase activity; [GO:0003684] damaged DNA binding; [K03509] DNA polymerase eta subunit [EC:2.7.7.7] 6.93 0.7370 5 Mapoly0028s0050 [PTHR13421] FAMILY NOT NAMED; [PF12251] snRNA-activating protein of 50kDa MW C terminal; [KOG2664] Small nuclear RNA activating protein complex - 50kD subunit (SNAP50) 8.31 0.7693 6 Mapoly0164s0017 [PTHR12181] LIPIN 9.00 0.7082 7 Mapoly0068s0044 [GO:0016787] hydrolase activity; [KOG1592] Asparaginase; [PTHR10188:SF8] THREONINE ASPARTASE 1; [PTHR10188] L-ASPARAGINASE; [PF01112] Asparaginase 9.22 0.7662 8 Mapoly0146s0040 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase 9.59 0.7687 9 Mapoly0067s0020 [PTHR23329] TUFTELIN-INTERACTING PROTEIN 11-RELATED; [KOG2185] Predicted RNA-processing protein, contains G-patch domain; [PF01585] G-patch domain; [PTHR23329:SF2] ZINC FINGER CCCH-TYPE WITH G PATCH DOMAIN PROTEIN; [GO:0003676] nucleic acid binding 16.73 0.7253 10 Mapoly0002s0209 [PF04413] 3-Deoxy-D-manno-octulosonic-acid transferase (kdotransferase); [K02527] 3-deoxy-D-manno-octulosonic-acid transferase [EC:2.-.-.-]; [PTHR23417] 3-DEOXY-D-MANNO-OCTULOSONIC-ACID TRANSFERASE/TRNA (GUANINE-N(7)-)-METHYLTRANSFERASE; [2.-.-.-] Transferases. 16.97 0.7039 11 Mapoly0054s0077 - 18.14 0.6946 12 Mapoly0002s0306 [GO:0016763] transferase activity, transferring pentosyl groups; [PF04179] Initiator tRNA phosphoribosyl transferase; [KOG2634] Initiator tRNA phosphoribosyl-transferase; [PTHR31811:SF0] SUBFAMILY NOT NAMED; [PTHR31811] FAMILY NOT NAMED 19.42 0.7423 13 Mapoly0033s0101 [PF15011] Casein Kinase 2 substrate 20.98 0.7247 14 Mapoly0096s0044 [PF14968] Coiled coil protein 84; [PTHR31198] FAMILY NOT NAMED 22.58 0.7378 15 Mapoly0007s0033 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR21717] TELOMERIC REPEAT BINDING PROTEIN 23.62 0.7572 16 Mapoly0024s0131 - 25.92 0.7579 17 Mapoly0069s0083 [K11662] actin-related protein 6; [PF00022] Actin; [PTHR11937:SF21] ACTIN-LIKE PROTEIN; [PTHR11937] ACTIN; [KOG0680] Actin-related protein - Arp6p 26.40 0.6970 18 Mapoly0133s0014 [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN 27.13 0.6947 19 Mapoly0049s0091 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR10799] SWI/SNF-RELATED MATRIX-ASSOCIATED ACTIN-DEPENDENT REGULATOR OF CHROMATIN SUBFAMILY-RELATED; [PF00176] SNF2 family N-terminal domain; [PF00271] Helicase conserved C-terminal domain; [KOG0385] Chromatin remodeling complex WSTF-ISWI, small subunit 28.50 0.6504 20 Mapoly0072s0017 [PF02096] 60Kd inner membrane protein; [KOG1239] Inner membrane protein translocase involved in respiratory chain assembly; [PF14559] Tetratricopeptide repeat; [GO:0016021] integral to membrane; [PTHR12428] OXA1; [GO:0051205] protein insertion into membrane 29.95 0.6735 21 Mapoly0011s0128 [PF13812] Pentatricopeptide repeat domain; [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 30.03 0.7530 22 Mapoly0172s0015 [PTHR13471] TETRATRICOPEPTIDE-LIKE HELICAL; [PF08424] NRDE-2, necessary for RNA interference 33.11 0.7573 23 Mapoly0033s0026 [K11799] WD repeat-containing protein 21A; [GO:0005515] protein binding; [PTHR19845] KATANIN P80 SUBUNIT; [PF00400] WD domain, G-beta repeat 34.35 0.7559 24 Mapoly0007s0176 [GO:0005847] mRNA cleavage and polyadenylation specificity factor complex; [K14402] cleavage and polyadenylation specificity factor subunit 2; [GO:0006378] mRNA polyadenylation; [KOG1135] mRNA cleavage and polyadenylation factor II complex, subunit CFT2 (CPSF subunit); [PF07521] RNA-metabolising metallo-beta-lactamase; [PTHR11203] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR; [PF13299] Cleavage and polyadenylation factor 2 C-terminal; [PTHR11203:SF5] CLEAVAGE AND POLYADENYLATION SPECIFICITY FACTOR, 100 KDA SUBUNIT; [PF10996] Beta-Casp domain; [GO:0006379] mRNA cleavage 34.64 0.7454 25 Mapoly0209s0009 [PF04266] ASCH domain 37.79 0.6931 26 Mapoly0102s0034 [GO:0008168] methyltransferase activity; [PTHR14741] S-ADENOSYLMETHIONINE-DEPENDENT METHYLTRANSFERASE RELATED; [2.1.1.-] Methyltransferases.; [GO:0009452] 7-methylguanosine RNA capping; [KOG2730] Methylase; [K14292] trimethylguanosine synthase [EC:2.1.1.-]; [PF09445] RNA cap guanine-N2 methyltransferase; [GO:0001510] RNA methylation 42.99 0.7381 27 Mapoly0104s0025 [PTHR21032] UNCHARACTERIZED; [PF01585] G-patch domain; [KOG1994] Predicted RNA binding protein, contains G-patch and Zn-finger domains; [GO:0003676] nucleic acid binding; [PF13821] Domain of unknown function (DUF4187) 46.96 0.6993 28 Mapoly0106s0042 [PF08245] Mur ligase middle domain; [GO:0005524] ATP binding; [GO:0016874] ligase activity; [GO:0009058] biosynthetic process; [PF01225] Mur ligase family, catalytic domain; [PF02875] Mur ligase family, glutamate ligase domain; [PTHR23135] MUR LIGASE FAMILY MEMBER; [PTHR23135:SF5] UDP-N-ACETYLMURAMATE--L-ALANINE LIGASE 48.21 0.6630 29 Mapoly0066s0087 [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PF09382] RQC domain; [KOG0353] ATP-dependent DNA helicase; [3.6.4.12] DNA helicase.; [K10899] ATP-dependent DNA helicase Q1 [EC:3.6.4.12]; [PTHR13710] DNA HELICASE RECQ FAMILY MEMBER; [PF00270] DEAD/DEAH box helicase; [GO:0006281] DNA repair; [PF00271] Helicase conserved C-terminal domain; [GO:0005622] intracellular; [GO:0003676] nucleic acid binding; [GO:0043140] ATP-dependent 3'-5' DNA helicase activity; [PF00570] HRDC domain 49.51 0.6967 30 Mapoly0009s0070 [PF13812] Pentatricopeptide repeat domain; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family 51.38 0.6888 31 Mapoly0027s0075 [3.4.11.9] Xaa-Pro aminopeptidase.; [KOG2414] Putative Xaa-Pro aminopeptidase; [PF05195] Aminopeptidase P, N-terminal domain; [GO:0004177] aminopeptidase activity; [K01262] Xaa-Pro aminopeptidase [EC:3.4.11.9]; [GO:0030145] manganese ion binding; [PF00557] Metallopeptidase family M24; [PTHR10804:SF17] XAA-PRO DIPEPTIDASE; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P) 52.48 0.7314 32 Mapoly0140s0038 [PF00169] PH domain; [PTHR22902] PH DOMAIN-CONTAINING 53.50 0.6896 33 Mapoly0052s0112 [PF00472] RF-1 domain; [GO:0005737] cytoplasm; [K02835] peptide chain release factor RF-1; [PTHR11075] PEPTIDE CHAIN RELEASE FACTOR; [PF03462] PCRF domain; [PTHR11075:SF9] PEPTIDE CHAIN RELEASE FACTOR 1; [GO:0006415] translational termination; [KOG2726] Mitochondrial polypeptide chain release factor; [GO:0016149] translation release factor activity, codon specific; [GO:0003747] translation release factor activity 54.42 0.7248 34 Mapoly0033s0023 - 54.77 0.6360 35 Mapoly3498s0001 - 55.39 0.7108 36 Mapoly0071s0019 [PTHR12176] UNCHARACTERIZED; [PF13847] Methyltransferase domain; [KOG1271] Methyltransferases 57.97 0.7216 37 Mapoly0119s0045 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [PTHR24115:SF194] SUBFAMILY NOT NAMED; [KOG0242] Kinesin-like protein; [GO:0005871] kinesin complex; [K10397] kinesin family member 6/9; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity 60.08 0.7257 38 Mapoly0015s0100 [K09537] DnaJ homolog subfamily C member 17; [KOG0691] Molecular chaperone (DnaJ superfamily); [PF00226] DnaJ domain; [GO:0003676] nucleic acid binding; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 60.99 0.6804 39 Mapoly0090s0008 [GO:0003677] DNA binding; [PTHR12780:SF0] SUBFAMILY NOT NAMED; [K03025] DNA-directed RNA polymerase III subunit RPC6; [PF05158] RNA polymerase Rpc34 subunit; [GO:0006351] transcription, DNA-dependent; [PTHR12780] RNA POLYMERASE III (DNA DIRECTED), 39KD SUBUNIT-RELATED; [KOG3233] RNA polymerase III, subunit C34; [GO:0003899] DNA-directed RNA polymerase activity; [2.7.7.6] DNA-directed RNA polymerase. 62.45 0.7127 40 Mapoly0004s0159 - 63.45 0.6767 41 Mapoly0057s0032 [PTHR22807] NOP2(YEAST)-RELATED NOL1/NOP2/FMU(SUN) DOMAIN-CONTAINING; [PTHR22807:SF4] WILLIAMS-BEUREN SYNDROME CRITICAL REGION PROTEIN 20; [PF01189] NOL1/NOP2/sun family; [KOG2360] Proliferation-associated nucleolar protein (NOL1) 63.78 0.7273 42 Mapoly0016s0023 [GO:0008152] metabolic process; [PTHR11825] SUBGROUP IIII AMINOTRANSFERASE; [PF01063] Aminotransferase class IV; [GO:0003824] catalytic activity 64.81 0.6010 43 Mapoly0025s0012 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [KOG0058] Peptide exporter, ABC superfamily; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [K02021] putative ABC transport system ATP-binding protein; [PF00005] ABC transporter 66.25 0.6127 44 Mapoly0012s0095 [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PF02810] SEC-C motif; [PF02338] OTU-like cysteine protease 67.81 0.6987 45 Mapoly0085s0033 [GO:0008168] methyltransferase activity; [K06970] ribosomal RNA large subunit methyltransferase F [EC:2.1.1.181]; [2.1.1.181] 23S rRNA (adenine(1618)-N(6))-methyltransferase.; [PF05971] Protein of unknown function (DUF890); [PTHR13393:SF0] SUBFAMILY NOT NAMED; [PTHR13393] SAM-DEPENDENT METHYLTRANSFERASE 67.82 0.6508 46 Mapoly0005s0290 [GO:0008168] methyltransferase activity; [PF05063] MT-A70; [PTHR14475] DROSOPHILA MELANOGASTER BITHORAX COMPLEX (BX-C)-RELATED; [GO:0006139] nucleobase-containing compound metabolic process; [PTHR14475:SF2] SUBFAMILY NOT NAMED 67.88 0.6451 47 Mapoly0029s0084 - 68.90 0.6552 48 Mapoly0011s0219 - 69.33 0.6896 49 Mapoly0038s0066 [KOG4589] Cell division protein FtsJ; [GO:0008168] methyltransferase activity; [PTHR10920] RIBOSOMAL RNA METHYLTRANSFERASE; [GO:0032259] methylation; [PF01728] FtsJ-like methyltransferase; [GO:0001510] RNA methylation 69.54 0.6929 50 Mapoly0029s0047 [KOG3332] N-acetylglucosaminyl phosphatidylinositol de-N-acetylase; [PTHR12993] N-ACETYLGLUCOSAMINYL-PHOSPHATIDYLINOSITOL DE-N-ACETYLASE-RELATED; [PF02585] GlcNAc-PI de-N-acetylase 73.48 0.6424