Guide Gene

Gene ID
Mapoly0137s0008
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF06278] Protein of unknown function (DUF1032); [PTHR14324] FAMILY NOT NAMED; [PTHR14324:SF3] SUBFAMILY NOT NAMED; [K11490] condensin-2 complex subunit H2; [KOG2359] Uncharacterized conserved protein

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0137s0008 [PF06278] Protein of unknown function (DUF1032); [PTHR14324] FAMILY NOT NAMED; [PTHR14324:SF3] SUBFAMILY NOT NAMED; [K11490] condensin-2 complex subunit H2; [KOG2359] Uncharacterized conserved protein 0.00 1.0000
1 Mapoly0024s0112 [GO:0005643] nuclear pore; [KOG1964] Nuclear pore complex, rNup107 component (sc Nup84); [PTHR13003] NUP107-RELATED; [GO:0006810] transport; [PF04121] Nuclear pore protein 84 / 107; [K14301] nuclear pore complex protein Nup1071.730.8807
2 Mapoly0019s0032 -2.830.8738
3 Mapoly0089s0007 [PF04821] Timeless protein; [PTHR22940:SF4] GB DEF: ARABIDOPSIS THALIANA GENOMIC DNA, CHROMOSOME 5, P1 CLONE:MXC20; [PF05029] Timeless protein C terminal region; [K03155] timeless; [KOG1974] DNA topoisomerase I-interacting protein; [PTHR22940] TIMEOUT/TIMELESS-22.830.8364
4 Mapoly0160s0021 [PTHR11062] EXOSTOSIN (HEPARAN SULFATE GLYCOSYLTRANSFERASE)-RELATED; [KOG1021] Acetylglucosaminyltransferase EXT1/exostosin 1; [PF03016] Exostosin family3.610.8168
5 Mapoly0001s0525 [K14408] cleavage stimulation factor subunit 3; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [KOG1914] mRNA cleavage and polyadenylation factor I complex, subunit RNA14; [PTHR19980] RNA CLEAVAGE STIMULATION FACTOR; [PF05843] Suppressor of forked protein (Suf)4.470.8540
6 Mapoly0039s0094 [PTHR15856] PHD FINGER PROTEIN 20-RELATED; [KOG1844] PHD Zn-finger proteins5.290.8141
7 Mapoly0013s0183 [KOG2739] Leucine-rich acidic nuclear protein; [PF14580] Leucine-rich repeat; [PTHR11375] ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 325.480.8276
8 Mapoly0009s0039 [GO:0030915] Smc5-Smc6 complex; [KOG2866] Uncharacterized conserved protein; [PTHR16140:SF0] SUBFAMILY NOT NAMED; [PTHR16140] UNCHARACTERIZED; [GO:0005634] nucleus; [GO:0006281] DNA repair; [PF08743] Nse4 C-terminal9.800.8610
9 Mapoly0034s0031 [GO:0007094] mitotic spindle assembly checkpoint; [K06638] mitotic spindle assembly checkpoint protein MAD1; [KOG4593] Mitotic checkpoint protein MAD1; [PTHR23168] MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD1 (MITOTIC ARREST DEFICIENT-LIKE PROTEIN 1); [PF05557] Mitotic checkpoint protein; [PTHR23168:SF0] SUBFAMILY NOT NAMED11.490.8366
10 Mapoly0006s0154 -12.450.7846
11 Mapoly0003s0275 [PF00097] Zinc finger, C3HC4 type (RING finger); [GO:0046872] metal ion binding; [PTHR10825] RING FINGER DOMAIN-CONTAINING, POLYCOMB GROUP COMPONENT13.420.7855
12 Mapoly0061s0078 [KOG1361] Predicted hydrolase involved in interstrand cross-link repair; [PTHR23240] DNA CROSS-LINK REPAIR PROTEIN PSO2/SNM1-RELATED; [PF12706] Beta-lactamase superfamily domain; [PF07522] DNA repair metallo-beta-lactamase; [PF00536] SAM domain (Sterile alpha motif)13.420.8127
13 Mapoly0148s0003 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding14.280.7596
14 Mapoly0019s0119 -16.520.8365
15 Mapoly0028s0049 [GO:0005515] protein binding; [PTHR12816] RETINOBLASTOMA BINDING PROTEIN 5; [KOG1273] WD40 repeat protein; [PF00400] WD domain, G-beta repeat19.180.7404
16 Mapoly0032s0119 [GO:0007076] mitotic chromosome condensation; [K06678] condensin complex subunit 3; [GO:0000796] condensin complex; [PTHR14418] CONDENSIN COMPLEX SUBUNIT 3-RELATED; [PF12719] Nuclear condensing complex subunits, C-term domain19.490.8465
17 Mapoly0118s0038 -20.620.8061
18 Mapoly0013s0191 [K13526] cation-transporting ATPase 13A2 [EC:3.6.3.-]; [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [3.6.3.-] Acting on acid anhydrides; catalyzing transmembrane movement of substances.; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [GO:0046872] metal ion binding; [KOG0208] Cation transport ATPase; [PF00122] E1-E2 ATPase; [PTHR24093:SF84] CATION-TRANSPORTING P-TYPE ATPASE20.660.7636
19 Mapoly0016s0155 [GO:0005515] protein binding; [PF13417] Glutathione S-transferase, N-terminal domain; [KOG0406] Glutathione S-transferase; [PTHR11260] GLUTATHIONE S-TRANSFERASE, GST, SUPERFAMILY, GST DOMAIN CONTAINING; [PF13410] Glutathione S-transferase, C-terminal domain; [PF01814] Hemerythrin HHE cation binding domain20.980.7765
20 Mapoly0052s0032 [GO:0006333] chromatin assembly or disassembly; [PF04729] ASF1 like histone chaperone; [K10753] histone chaperone ASF1; [PTHR12040] ANTI-SILENCING PROTEIN 1; [GO:0005634] nucleus21.630.7683
21 Mapoly0009s0067 [PTHR31789] FAMILY NOT NAMED26.500.7766
22 Mapoly0087s0011 [GO:0005634] nucleus; [PF07557] Shugoshin C terminus; [GO:0000775] chromosome, centromeric region; [GO:0045132] meiotic chromosome segregation26.720.7992
23 Mapoly0113s0048 [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [KOG1408] WD40 repeat protein; [PF00400] WD domain, G-beta repeat29.660.8272
24 Mapoly0005s0174 [GO:0005524] ATP binding; [KOG0933] Structural maintenance of chromosome protein 2 (chromosome condensation complex Condensin, subunit E); [GO:0007076] mitotic chromosome condensation; [GO:0005515] protein binding; [PTHR18937] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC FAMILY MEMBER; [PF02463] RecF/RecN/SMC N terminal domain; [GO:0000796] condensin complex; [GO:0051276] chromosome organization; [GO:0005694] chromosome; [PTHR18937:SF9] STRUCTURAL MAINTENANCE OF CHROMOSOMES SMC2; [K06674] structural maintenance of chromosome 2; [PF06470] SMC proteins Flexible Hinge Domain29.700.8302
25 Mapoly0066s0041 [GO:0030915] Smc5-Smc6 complex; [PTHR21330] UNCHARACTERIZED; [GO:0019789] SUMO ligase activity; [PF11789] Zinc-finger of the MIZ type in Nse subunit; [GO:0000724] double-strand break repair via homologous recombination31.620.7687
26 Mapoly0057s0017 -32.980.8106
27 Mapoly0020s0135 [PF03941] Inner centromere protein, ARK binding region; [PTHR13142:SF1] INCENP; [KOG1295] Nonsense-mediated decay protein Upf3; [PTHR13142] INNER CENTROMERE PROTEIN33.050.8247
28 Mapoly0003s0175 [KOG1105] Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1; [PF07500] Transcription factor S-II (TFIIS), central domain; [GO:0008270] zinc ion binding; [PTHR11477] TRANSCRIPTION ELONGATION FACTOR S-II; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [K03145] transcription elongation factor S-II; [PF01096] Transcription factor S-II (TFIIS)34.180.7506
29 Mapoly0052s0098 [PF05512] AWPM-19-like family36.630.7189
30 Mapoly0003s0259 [GO:0005524] ATP binding; [KOG1187] Serine/threonine protein kinase; [PTHR24420:SF474] SUBFAMILY NOT NAMED; [PF00069] Protein kinase domain; [GO:0005515] protein binding; [GO:0004672] protein kinase activity; [PF00560] Leucine Rich Repeat; [GO:0006468] protein phosphorylation; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE38.390.7985
31 Mapoly0005s0005 [PF00628] PHD-finger; [GO:0005515] protein binding; [PF00856] SET domain; [PTHR22884] SET DOMAIN PROTEINS39.470.7440
32 Mapoly0051s0002 [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [KOG0242] Kinesin-like protein; [GO:0005871] kinesin complex; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity40.660.8037
33 Mapoly0072s0079 [PF11717] RNA binding activity-knot of a chromodomain; [K11339] mortality factor 4-like protein 1; [GO:0005634] nucleus; [PTHR10880] MORTALITY FACTOR 4-LIKE PROTEIN; [PF05712] MRG41.710.7862
34 Mapoly0160s0022 [PF06592] Protein of unknown function (DUF1138)41.810.7483
35 Mapoly0188s0017 [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)42.430.7406
36 Mapoly0061s0120 [PTHR13269] UNCHARACTERIZED; [PTHR13269:SF6] SUBFAMILY NOT NAMED; [PF09531] Nucleoporin protein Ndc1-Nup42.850.7796
37 Mapoly0014s0143 -42.990.6458
38 Mapoly0034s0011 [PF09133] SANTA (SANT Associated)43.310.7891
39 Mapoly0008s0161 [GO:0051382] kinetochore assembly; [GO:0019237] centromeric DNA binding; [PTHR16684] CENTROMERE PROTEIN C; [GO:0000776] kinetochore43.360.7714
40 Mapoly0009s0015 [PF00078] Reverse transcriptase (RNA-dependent DNA polymerase); [PTHR12066] TELOMERASE REVERSE TRANSCRIPTASE; [GO:0003964] RNA-directed DNA polymerase activity; [K11126] telomerase reverse transcriptase [EC:2.7.7.49]; [PTHR12066:SF0] SUBFAMILY NOT NAMED; [2.7.7.49] RNA-directed DNA polymerase.; [PF12009] Telomerase ribonucleoprotein complex - RNA binding domain; [KOG1005] Telomerase catalytic subunit/reverse transcriptase TERT43.750.7819
41 Mapoly0007s0173 -44.500.7739
42 Mapoly0074s0003 [GO:0003677] DNA binding; [PF12254] DNA polymerase alpha subunit p180 N terminal; [GO:0006260] DNA replication; [GO:0001882] nucleoside binding; [K02320] DNA polymerase alpha subunit A [EC:2.7.7.7]; [GO:0000166] nucleotide binding; [2.7.7.7] DNA-directed DNA polymerase.; [PF00136] DNA polymerase family B; [GO:0006270] DNA replication initiation; [PF08996] DNA Polymerase alpha zinc finger; [KOG0970] DNA polymerase alpha, catalytic subunit; [GO:0003887] DNA-directed DNA polymerase activity; [PF03104] DNA polymerase family B, exonuclease domain; [PTHR10322] DNA POLYMERASE CATALYTIC SUBUNIT44.990.7740
43 Mapoly0105s0060 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [K12898] heterogeneous nuclear ribonucleoprotein F/H; [KOG4211] Splicing factor hnRNP-F and related RNA-binding proteins; [PTHR13976] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED45.030.7917
44 Mapoly0003s0063 [GO:0005524] ATP binding; [KOG0198] MEKK and related serine/threonine protein kinases; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [PTHR24361:SF129] MITOGEN-ACTIVATED PROTEIN KINASE KINASE KINASE; [GO:0006468] protein phosphorylation; [PTHR24361] MITOGEN-ACTIVATED KINASE KINASE KINASE45.300.8055
45 Mapoly0024s0141 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain45.780.7154
46 Mapoly0043s0047 [GO:0005515] protein binding; [PF00612] IQ calmodulin-binding motif; [PTHR25069] FAMILY NOT NAMED; [PF00307] Calponin homology (CH) domain45.830.8033
47 Mapoly0084s0004 [KOG0446] Vacuolar sorting protein VPS1, dynamin, and related proteins; [PF00350] Dynamin family; [PTHR11566] DYNAMIN; [GO:0003924] GTPase activity; [GO:0005525] GTP binding47.730.7811
48 Mapoly0002s0133 [GO:0007076] mitotic chromosome condensation; [PTHR13108] FAMILY NOT NAMED; [PF05786] Condensin complex subunit 2; [KOG2328] Chromosome condensation complex Condensin, subunit H; [GO:0000796] condensin complex; [K06676] condensin complex subunit 247.960.7923
49 Mapoly0065s0078 [PTHR24115:SF171] SUBFAMILY NOT NAMED; [PF00225] Kinesin motor domain; [GO:0005524] ATP binding; [PTHR24115] FAMILY NOT NAMED; [K10403] kinesin family member 22; [GO:0005871] kinesin complex; [GO:0007018] microtubule-based movement; [GO:0008017] microtubule binding; [GO:0003777] microtubule motor activity47.960.7982
50 Mapoly0019s0176 [KOG0320] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger); [PTHR12183] UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN48.500.7237
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