Guide Gene

Gene ID
Mapoly0098s0012
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR23147] SERINE/ARGININE RICH SPLICING FACTOR; [KOG0126] Predicted RNA-binding protein (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0098s0012 [PTHR23147] SERINE/ARGININE RICH SPLICING FACTOR; [KOG0126] Predicted RNA-binding protein (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00 1.0000
1 Mapoly0001s0121 [PF00641] Zn-finger in Ran binding protein and others; [PTHR23238] RNA BINDING PROTEIN; [KOG1995] Conserved Zn-finger protein; [GO:0008270] zinc ion binding1.000.8418
2 Mapoly0080s0056 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [GO:0006260] DNA replication; [PF00493] MCM2/3/5 family; [K10738] minichromosome maintenance protein 9; [PTHR11630:SF48] DNA REPLICATION LICENSING FACTOR MCM1; [PTHR11630] DNA REPLICATION LICENSING FACTOR; [KOG0477] DNA replication licensing factor, MCM2 component2.240.7950
3 Mapoly0187s0004 [KOG0533] RRM motif-containing protein; [PTHR15241] TRANSFORMER-2-RELATED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)2.450.8302
4 Mapoly0070s0034 [KOG0108] mRNA cleavage and polyadenylation factor I complex, subunit RNA15; [PF14327] Hinge domain of cleavage stimulation factor subunit 2; [PTHR23139:SF8] RNA RECOGNITION MOTIF CONTAINING PROTEIN; [PTHR23139] RNA-BINDING PROTEIN; [GO:0003676] nucleic acid binding; [K14407] cleavage stimulation factor subunit 2; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)2.830.8328
5 Mapoly0006s0154 -4.900.7927
6 Mapoly0003s0175 [KOG1105] Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1; [PF07500] Transcription factor S-II (TFIIS), central domain; [GO:0008270] zinc ion binding; [PTHR11477] TRANSCRIPTION ELONGATION FACTOR S-II; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [K03145] transcription elongation factor S-II; [PF01096] Transcription factor S-II (TFIIS)5.200.7800
7 Mapoly0052s0032 [GO:0006333] chromatin assembly or disassembly; [PF04729] ASF1 like histone chaperone; [K10753] histone chaperone ASF1; [PTHR12040] ANTI-SILENCING PROTEIN 1; [GO:0005634] nucleus6.930.7804
8 Mapoly0052s0092 [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding; [KOG0106] Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily); [PTHR10548] SPLICING FACTOR, ARGININE/SERINE-RICH; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)7.210.7989
9 Mapoly0114s0034 [GO:0003723] RNA binding; [KOG1588] RNA-binding protein Sam68 and related KH domain proteins; [PF00013] KH domain; [PTHR11208] RNA-BINDING PROTEIN RELATED12.410.7763
10 Mapoly0003s0009 [GO:0005515] protein binding; [PTHR18763] WD-REPEAT PROTEIN 18; [PF00400] WD domain, G-beta repeat13.490.7612
11 Mapoly0158s0010 [KOG1375] Beta tubulin; [PF00091] Tubulin/FtsZ family, GTPase domain; [GO:0005874] microtubule; [K07375] tubulin beta; [PTHR11588] TUBULIN; [GO:0007017] microtubule-based process; [PF03953] Tubulin C-terminal domain; [GO:0006184] GTP catabolic process; [GO:0003924] GTPase activity; [GO:0051258] protein polymerization; [GO:0043234] protein complex; [GO:0005525] GTP binding14.970.7321
12 Mapoly0001s0525 [K14408] cleavage stimulation factor subunit 3; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [KOG1914] mRNA cleavage and polyadenylation factor I complex, subunit RNA14; [PTHR19980] RNA CLEAVAGE STIMULATION FACTOR; [PF05843] Suppressor of forked protein (Suf)16.520.7895
13 Mapoly0007s0146 [KOG4374] RNA-binding protein Bicaudal-C; [PTHR15457] SEC-23 INTERACTING PROTEIN P125; [PF00536] SAM domain (Sterile alpha motif)17.660.7414
14 Mapoly0015s0045 [KOG0533] RRM motif-containing protein; [PTHR19965] RNA AND EXPORT FACTOR BINDING PROTEIN; [K12881] THO complex subunit 4; [PF13865] C-terminal duplication domain of Friend of PRMT1; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)18.000.7664
15 Mapoly0010s0010 [GO:0005643] nuclear pore; [PF13874] Nucleoporin complex subunit 54; [PTHR13000] NUCLEOPORIN P54; [KOG3091] Nuclear pore complex, p54 component (sc Nup57)19.240.7773
16 Mapoly0043s0056 [K12831] splicing factor 3B subunit 4; [KOG0131] Splicing factor 3b, subunit 4; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)27.750.7436
17 Mapoly0037s0121 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain)31.080.7428
18 Mapoly0023s0090 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR22929] RNA POLYMERASE III TRANSCRIPTION INITIATION FACTOR B; [PTHR22929:SF0] SUBFAMILY NOT NAMED31.620.7470
19 Mapoly0013s0183 [KOG2739] Leucine-rich acidic nuclear protein; [PF14580] Leucine-rich repeat; [PTHR11375] ACIDIC LEUCINE-RICH NUCLEAR PHOSPHOPROTEIN 3232.020.7387
20 Mapoly0173s0011 [PF00183] Hsp90 protein; [GO:0005524] ATP binding; [GO:0006950] response to stress; [KOG0020] Endoplasmic reticulum glucose-regulated protein (GRP94/endoplasmin), HSP90 family; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [GO:0006457] protein folding; [K04079] molecular chaperone HtpG; [PTHR11528] HEAT SHOCK PROTEIN 90; [GO:0051082] unfolded protein binding34.290.7588
21 Mapoly0052s0047 [PF03556] Cullin binding; [PTHR12281] RP42 RELATED34.770.7230
22 Mapoly0021s0143 -35.500.7482
23 Mapoly0147s0033 [PF07738] Sad1 / UNC-like C-terminal; [PTHR12911] SAD1/UNC-84-LIKE PROTEIN-RELATED; [KOG2687] Spindle pole body protein, contains UNC-84 domain35.550.7524
24 Mapoly0001s0557 [PTHR11142] PSEUDOURIDYLATE SYNTHASE; [GO:0003723] RNA binding; [K06173] tRNA pseudouridine synthase A [EC:5.4.99.12]; [GO:0001522] pseudouridine synthesis; [KOG2553] Pseudouridylate synthase; [GO:0009451] RNA modification; [PF01416] tRNA pseudouridine synthase; [GO:0009982] pseudouridine synthase activity; [5.4.99.12] tRNA pseudouridine(38-40) synthase.35.720.7319
25 Mapoly0061s0120 [PTHR13269] UNCHARACTERIZED; [PTHR13269:SF6] SUBFAMILY NOT NAMED; [PF09531] Nucleoporin protein Ndc1-Nup37.350.7571
26 Mapoly0060s0105 [PTHR24012] FAMILY NOT NAMED; [KOG4207] Predicted splicing factor, SR protein superfamily; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)40.210.7441
27 Mapoly0188s0017 [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [PTHR24011] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)43.430.7152
28 Mapoly0058s0003 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PF04818] RNA polymerase II-binding domain.; [PTHR12323] SR-RELATED CTD ASSOCIATED FACTOR 6; [PF01805] Surp module47.550.7477
29 Mapoly0016s0006 [PTHR19923] WD40 REPEAT PROTEINPRL1/PRL2-RELATED; [PTHR19923:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [K12862] pleiotropic regulator 1; [KOG0285] Pleiotropic regulator 1; [PF00400] WD domain, G-beta repeat49.570.7324
30 Mapoly0037s0072 [GO:0005515] protein binding; [PTHR21712] UNCHARACTERIZED; [PF00498] FHA domain51.940.7162
31 Mapoly0083s0033 [PTHR10539] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13; [GO:0005515] protein binding; [KOG2908] 26S proteasome regulatory complex, subunit RPN9/PSMD13; [K03039] 26S proteasome regulatory subunit N9; [PF01399] PCI domain52.500.7091
32 Mapoly0105s0060 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [K12898] heterogeneous nuclear ribonucleoprotein F/H; [KOG4211] Splicing factor hnRNP-F and related RNA-binding proteins; [PTHR13976] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED53.600.7482
33 Mapoly0082s0082 -54.910.7130
34 Mapoly0186s0008 [GO:0003676] nucleic acid binding; [KOG0106] Alternative splicing factor SRp55/B52/SRp75 (RRM superfamily); [PTHR10548] SPLICING FACTOR, ARGININE/SERINE-RICH; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)55.120.7095
35 Mapoly0160s0022 [PF06592] Protein of unknown function (DUF1138)56.680.7092
36 Mapoly0016s0079 [GO:0005524] ATP binding; [KOG2680] DNA helicase TIP49, TBP-interacting protein; [3.6.4.12] DNA helicase.; [PF06068] TIP49 C-terminus; [GO:0043141] ATP-dependent 5'-3' DNA helicase activity; [K11338] RuvB-like protein 2 [EC:3.6.4.12]; [GO:0003678] DNA helicase activity; [PTHR11093] RUVB-RELATED REPTIN AND PONTIN; [PTHR11093:SF2] RUVB-LIKE 2 (REPTIN)59.420.7216
37 Mapoly0024s0122 [PTHR30060] INNER MEMBRANE PROTEIN; [PF09745] Coiled-coil domain-containing protein 55 (DUF2040); [PTHR30060:SF0] INNER MEMBRANE PROTEIN59.580.6592
38 Mapoly0062s0031 -60.910.7201
39 Mapoly0031s0090 [KOG0379] Kelch repeat-containing proteins; [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN; [PF13415] Galactose oxidase, central domain63.480.7386
40 Mapoly0001s0304 [KOG0543] FKBP-type peptidyl-prolyl cis-trans isomerase; [PTHR10516] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [GO:0005515] protein binding; [PF13414] TPR repeat; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [PF00254] FKBP-type peptidyl-prolyl cis-trans isomerase; [5.2.1.8] Peptidylprolyl isomerase.; [PF00515] Tetratricopeptide repeat63.520.6165
41 Mapoly0068s0031 [KOG1882] Transcriptional regulator SNIP1, contains FHA domain; [GO:0005515] protein binding; [K13108] smad nuclear-interacting protein 1; [PF00498] FHA domain; [PTHR23308] NUCLEAR INHIBITOR OF PROTEIN PHOSPHATASE-166.630.7157
42 Mapoly0013s0040 [GO:0005524] ATP binding; [KOG0359] Chaperonin complex component, TCP-1 zeta subunit (CCT6); [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family66.910.7162
43 Mapoly0108s0031 [GO:0005524] ATP binding; [K04499] RuvB-like protein 1 (pontin 52); [KOG1942] DNA helicase, TBP-interacting protein; [PF06068] TIP49 C-terminus; [GO:0043141] ATP-dependent 5'-3' DNA helicase activity; [GO:0003678] DNA helicase activity; [PTHR11093] RUVB-RELATED REPTIN AND PONTIN67.500.7203
44 Mapoly0159s0017 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR10032] ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF13837] Myb/SANT-like DNA-binding domain71.300.7004
45 Mapoly0011s0125 [PTHR19375] HEAT SHOCK PROTEIN 70KDA; [K03283] heat shock 70kDa protein 1/8; [KOG0100] Molecular chaperones GRP78/BiP/KAR2, HSP70 superfamily; [PF00012] Hsp70 protein72.730.6669
46 Mapoly0021s0031 [KOG0645] WD40 repeat protein; [PTHR10971] MRNA EXPORT FACTOR AND BUB3; [GO:0005515] protein binding; [PTHR10971:SF2] WD REPEAT-CONTAINING PROTEIN 92; [PF00400] WD domain, G-beta repeat74.160.7108
47 Mapoly0138s0046 [KOG1803] DNA helicase; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain74.830.7225
48 Mapoly0071s0102 [PF03645] Tctex-1 family; [PTHR21255:SF7] SUBFAMILY NOT NAMED; [PTHR21255] T-COMPLEX-ASSOCIATED-TESTIS-EXPRESSED 1/ DYNEIN LIGHT CHAIN; [KOG4108] Dynein light chain75.220.7123
49 Mapoly0091s0056 [PF05918] Apoptosis inhibitory protein 5 (API5); [KOG2213] Apoptosis inhibitor 5/fibroblast growth factor 2-interacting factor 2, and related proteins; [PTHR12758] APOPTOSIS INHIBITOR 5-RELATED76.410.7147
50 Mapoly0012s0180 [PTHR15572] GLIOMA TUMOR SUPPRESSOR CANDIDATE REGION GENE 1; [PF15249] Glioma tumor suppressor candidate region77.730.7045
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