Guide Gene

Gene ID
Mapoly0013s0143
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0003723] RNA binding; [PF05634] APO RNA-binding; [PTHR10388] EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0013s0143 [GO:0003723] RNA binding; [PF05634] APO RNA-binding; [PTHR10388] EUKARYOTIC TRANSLATION INITIATION FACTOR SUI1 0.00 1.0000
1 Mapoly0019s0038 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE2.000.6927
2 Mapoly0105s0006 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0870] DNA polymerase epsilon, subunit D7.070.6937
3 Mapoly0110s0033 [PF01981] Peptidyl-tRNA hydrolase PTH2; [3.1.1.29] Aminoacyl-tRNA hydrolase.; [K04794] peptidyl-tRNA hydrolase, PTH2 family [EC:3.1.1.29]; [PTHR12649] PEPTIDYL-TRNA HYDROLASE 2; [GO:0004045] aminoacyl-tRNA hydrolase activity8.370.6810
4 Mapoly0095s0041 [PTHR19288] 4-NITROPHENYLPHOSPHATASE-RELATED; [KOG2961] Predicted hydrolase (HAD superfamily); [PF09419] Mitochondrial PGP phosphatase; [K07015] putative glutamine amidotransferase15.560.6150
5 Mapoly0003s0175 [KOG1105] Transcription elongation factor TFIIS/Cofactor of enhancer-binding protein Sp1; [PF07500] Transcription factor S-II (TFIIS), central domain; [GO:0008270] zinc ion binding; [PTHR11477] TRANSCRIPTION ELONGATION FACTOR S-II; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [K03145] transcription elongation factor S-II; [PF01096] Transcription factor S-II (TFIIS)17.550.6904
6 Mapoly0042s0045 [PTHR21139] TRIOSEPHOSPHATE ISOMERASE; [PTHR21139:SF1] TRIOSEPHOSPHATE ISOMERASE; [KOG1643] Triosephosphate isomerase; [5.3.1.1] Triose-phosphate isomerase.; [GO:0008152] metabolic process; [GO:0004807] triose-phosphate isomerase activity; [PF00121] Triosephosphate isomerase; [K01803] triosephosphate isomerase (TIM) [EC:5.3.1.1]17.750.6918
7 Mapoly0036s0137 -18.490.6701
8 Mapoly0009s0131 [PF01062] Bestrophin, RFP-TM, chloride channel23.220.6697
9 Mapoly0005s0134 [PF14368] Probable lipid transfer24.390.6231
10 Mapoly0103s0074 [PTHR23117] GUANYLATE KINASE-RELATED; [GO:0005515] protein binding; [PF00625] Guanylate kinase; [KOG0707] Guanylate kinase; [2.7.4.8] Guanylate kinase.; [K00942] guanylate kinase [EC:2.7.4.8]25.100.5949
11 Mapoly0079s0029 [GO:0005986] sucrose biosynthetic process; [PF08472] Sucrose-6-phosphate phosphohydrolase C-terminal; [PTHR12526:SF2] SUCROSE PHOSPHATE PHOSPHATASE; [GO:0050307] sucrose-phosphate phosphatase activity; [PF05116] Sucrose-6F-phosphate phosphohydrolase; [PTHR12526] GLYCOSYLTRANSFERASE26.190.6320
12 Mapoly0062s0098 [PF09229] Activator of Hsp90 ATPase, N-terminal; [GO:0051087] chaperone binding; [PTHR13009] HEAT SHOCK PROTEIN 90 (HSP90) CO-CHAPERONE AHA-1; [GO:0001671] ATPase activator activity33.000.6446
13 Mapoly0159s0017 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR10032] ZINC FINGER PROTEIN WITH KRAB AND SCAN DOMAINS; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF13837] Myb/SANT-like DNA-binding domain37.310.6568
14 Mapoly0094s0046 [GO:0016762] xyloglucan:xyloglucosyl transferase activity; [GO:0048046] apoplast; [GO:0006073] cellular glucan metabolic process; [PTHR31062] FAMILY NOT NAMED; [PF06955] Xyloglucan endo-transglycosylase (XET) C-terminus; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PF00722] Glycosyl hydrolases family 16; [2.4.1.207] Xyloglucan:xyloglucosyl transferase.; [K08235] xyloglucan:xyloglucosyl transferase [EC:2.4.1.207]; [GO:0005618] cell wall37.950.6299
15 Mapoly0045s0122 [PTHR16039] FAMILY NOT NAMED; [PF15003] HAUS augmin-like complex subunit 2; [GO:0051225] spindle assembly; [GO:0031023] microtubule organizing center organization41.570.5940
16 Mapoly0006s0031 -42.000.6020
17 Mapoly0127s0046 -44.160.5615
18 Mapoly0033s0025 [PTHR31169] FAMILY NOT NAMED; [PF10497] Zinc-finger domain of monoamine-oxidase A repressor R145.170.6190
19 Mapoly0024s0122 [PTHR30060] INNER MEMBRANE PROTEIN; [PF09745] Coiled-coil domain-containing protein 55 (DUF2040); [PTHR30060:SF0] INNER MEMBRANE PROTEIN46.740.6125
20 Mapoly0003s0083 [PF13855] Leucine rich repeat; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding48.740.6034
21 Mapoly0056s0111 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR13581] MRG-BINDING PROTEIN; [PF07904] Chromatin modification-related protein EAF7; [GO:0043189] H4/H2A histone acetyltransferase complex; [GO:0005634] nucleus49.750.6315
22 Mapoly0030s0066 [PTHR31469] FAMILY NOT NAMED51.370.6397
23 Mapoly0123s0012 [KOG0048] Transcription factor, Myb superfamily; [PF00249] Myb-like DNA-binding domain; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [GO:0003682] chromatin binding53.000.5793
24 Mapoly0069s0070 [PF00091] Tubulin/FtsZ family, GTPase domain; [GO:0005874] microtubule; [KOG1374] Gamma tubulin; [PTHR11588] TUBULIN; [GO:0007017] microtubule-based process; [PTHR11588:SF4] TUBULIN DELTA CHAIN; [GO:0005200] structural constituent of cytoskeleton; [K10390] tubulin delta; [GO:0005525] GTP binding56.760.6513
25 Mapoly0086s0047 [PTHR22691:SF1] VARIABLE FLAGELLAR NUMBER PROTEIN-RELATED; [PTHR22691] YEAST SPT2-RELATED58.380.6403
26 Mapoly0054s0019 [PTHR16105:SF0] SUBFAMILY NOT NAMED; [PTHR16105] UNCHARACTERIZED; [GO:0003676] nucleic acid binding; [K13157] U11/U12 small nuclear ribonucleoprotein 65 kDa protein; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)59.080.6448
27 Mapoly0147s0008 [GO:0009058] biosynthetic process; [PF02911] Formyl transferase, C-terminal domain; [PTHR11138] METHIONYL-TRNA FORMYLTRANSFERASE; [GO:0016742] hydroxymethyl-, formyl- and related transferase activity; [PTHR11138:SF0] SUBFAMILY NOT NAMED60.790.5684
28 Mapoly0001s0052 [K12602] WD repeat-containing protein 61; [KOG0265] U5 snRNP-specific protein-like factor and related proteins; [GO:0005515] protein binding; [PF00400] WD domain, G-beta repeat; [PTHR22841] FAMILY NOT NAMED62.350.5836
29 Mapoly0069s0013 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [PF05186] Dpy-30 motif; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process64.340.5848
30 Mapoly0119s0039 [KOG0541] Alkyl hydroperoxide reductase/peroxiredoxin; [PTHR10430:SF8] PEROXIREDOXIN; [GO:0016491] oxidoreductase activity; [PF08534] Redoxin; [PTHR10430] PEROXIREDOXIN69.970.6230
31 Mapoly0096s0024 [3.1.26.5] Ribonuclease P.; [PTHR10993] OCTANOYLTRANSFERASE; [K03537] ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]; [GO:0008033] tRNA processing; [PF01900] Rpp14/Pop5 family; [KOG4639] RNase P/RNase MRP subunit POP5; [GO:0004540] ribonuclease activity70.750.5771
32 Mapoly0033s0169 [KOG1586] Protein required for fusion of vesicles in vesicular transport, alpha-SNAP; [PTHR13768:SF8] ALPHA-SOLUBLE NSF ATTACHMENT PROTEIN (SNAP-ALPHA); [PTHR13768] SOLUBLE NSF ATTACHMENT PROTEIN (SNAP); [GO:0006886] intracellular protein transport; [PF14938] Soluble NSF attachment protein, SNAP75.860.6178
33 Mapoly0020s0092 [PF04133] Vacuolar protein sorting 55; [PTHR12050:SF0] SUBFAMILY NOT NAMED; [KOG2174] Leptin receptor gene-related protein; [PTHR12050] LEPTIN RECEPTOR-RELATED77.920.5850
34 Mapoly0114s0031 -78.830.6057
35 Mapoly0013s0014 [PF05641] Agenet domain82.460.5678
36 Mapoly0009s0033 [KOG2652] RNA polymerase II transcription initiation factor TFIIA, large chain; [PF13920] Zinc finger, C3HC4 type (RING finger)87.460.5967
37 Mapoly0040s0053 -88.060.5116
38 Mapoly0030s0010 -88.320.6086
39 Mapoly0010s0195 [KOG4214] Myotrophin and similar proteins; [PTHR24188] ANKYRIN REPEAT PROTEIN; [PF12796] Ankyrin repeats (3 copies)88.370.6224
40 Mapoly0051s0027 [GO:0003677] DNA binding; [PF02178] AT hook motif91.100.5855
41 Mapoly0095s0037 [PTHR14003:SF1] YY1-RELATED; [PF13465] Zinc-finger double domain; [PTHR14003] TRANSCRIPTIONAL REPRESSOR PROTEIN YY; [PF13894] C2H2-type zinc finger91.780.6090
42 Mapoly0003s0077 [PTHR15606:SF3] HSP40-RELATED; [KOG4188] Uncharacterized conserved protein; [PF00226] DnaJ domain; [PTHR15606] DNAJ HOMOLOG SUBFAMILY C MEMBER 8/LIPOPOLYSACCHARIDE SPECIFIC RESPONSE-7-RELATED; [PF12572] Protein of unknown function (DUF3752)100.870.5929
43 Mapoly0097s0075 -107.470.6003
44 Mapoly0028s0074 [PTHR22981] 3-HYDROXYISOBUTYRATE DEHYDROGENASE-RELATED; [PF00855] PWWP domain; [PTHR22981:SF27] SUBFAMILY NOT NAMED107.630.5061
45 Mapoly0002s0008 -111.150.6010
46 Mapoly0067s0013 [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR10920] RIBOSOMAL RNA METHYLTRANSFERASE; [GO:0032259] methylation; [PF01728] FtsJ-like methyltransferase; [GO:0001510] RNA methylation; [K02427] ribosomal RNA large subunit methyltransferase E [EC:2.1.1.-]; [KOG1099] SAM-dependent methyltransferase/cell division protein FtsJ111.930.5072
47 Mapoly0109s0062 [PF05018] Protein of unknown function (DUF667); [PTHR12458] ORF PROTEIN; [KOG3213] Transcription factor IIB112.310.5365
48 Mapoly0147s0006 [K00604] methionyl-tRNA formyltransferase [EC:2.1.2.9]; [GO:0009058] biosynthetic process; [2.1.2.9] Methionyl-tRNA formyltransferase.; [PTHR11138] METHIONYL-TRNA FORMYLTRANSFERASE; [GO:0016742] hydroxymethyl-, formyl- and related transferase activity; [PTHR11138:SF0] SUBFAMILY NOT NAMED; [PF00551] Formyl transferase113.060.5196
49 Mapoly0084s0016 -116.890.5765
50 Mapoly0062s0064 [KOG4001] Axonemal dynein light chain; [PF10211] Axonemal dynein light chain; [K10410] dynein light intermediate chain, axonemal; [PTHR13183] AXONEMAL INNER ARM DYNEIN LIGHT CHAIN 28117.610.5814
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