Guide Gene

Gene ID
Mapoly0147s0008
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0009058] biosynthetic process; [PF02911] Formyl transferase, C-terminal domain; [PTHR11138] METHIONYL-TRNA FORMYLTRANSFERASE; [GO:0016742] hydroxymethyl-, formyl- and related transferase activity; [PTHR11138:SF0] SUBFAMILY NOT NAMED

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0147s0008 [GO:0009058] biosynthetic process; [PF02911] Formyl transferase, C-terminal domain; [PTHR11138] METHIONYL-TRNA FORMYLTRANSFERASE; [GO:0016742] hydroxymethyl-, formyl- and related transferase activity; [PTHR11138:SF0] SUBFAMILY NOT NAMED 0.00 1.0000
1 Mapoly0147s0006 [K00604] methionyl-tRNA formyltransferase [EC:2.1.2.9]; [GO:0009058] biosynthetic process; [2.1.2.9] Methionyl-tRNA formyltransferase.; [PTHR11138] METHIONYL-TRNA FORMYLTRANSFERASE; [GO:0016742] hydroxymethyl-, formyl- and related transferase activity; [PTHR11138:SF0] SUBFAMILY NOT NAMED; [PF00551] Formyl transferase2.000.6845
2 Mapoly0053s0055 [KOG0871] Class 2 transcription repressor NC2, beta subunit (Dr1); [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular5.390.7020
3 Mapoly0067s0013 [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR10920] RIBOSOMAL RNA METHYLTRANSFERASE; [GO:0032259] methylation; [PF01728] FtsJ-like methyltransferase; [GO:0001510] RNA methylation; [K02427] ribosomal RNA large subunit methyltransferase E [EC:2.1.1.-]; [KOG1099] SAM-dependent methyltransferase/cell division protein FtsJ6.630.6384
4 Mapoly0019s0171 [PF09139] Mitochondrial matrix Mmp37; [PTHR13619] UNCHARACTERIZED; [PTHR13619:SF0] SUBFAMILY NOT NAMED; [KOG2986] Uncharacterized conserved protein6.930.6382
5 Mapoly0061s0117 -7.620.6986
6 Mapoly0023s0045 [KOG3264] Uncharacterized conserved protein; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR13321] MEDIATOR OF RNA POLYMERASE II TRANSCRIPTION, SUBUNIT 18; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [PTHR13321:SF2] SUBFAMILY NOT NAMED; [PF09637] Med18 protein7.750.6394
7 Mapoly0107s0018 [GO:0015035] protein disulfide oxidoreductase activity; [PTHR13887] GLUTATHIONE S-TRANSFERASE KAPPA; [PF01323] DSBA-like thioredoxin domain9.640.6848
8 Mapoly0028s0130 [PTHR12452] 42-9-9 PROTEIN-RELATED; [KOG3425] Uncharacterized conserved protein; [PF06110] Eukaryotic protein of unknown function (DUF953)14.390.6444
9 Mapoly0096s0024 [3.1.26.5] Ribonuclease P.; [PTHR10993] OCTANOYLTRANSFERASE; [K03537] ribonuclease P/MRP protein subunit POP5 [EC:3.1.26.5]; [GO:0008033] tRNA processing; [PF01900] Rpp14/Pop5 family; [KOG4639] RNase P/RNase MRP subunit POP5; [GO:0004540] ribonuclease activity15.300.6351
10 Mapoly0109s0062 [PF05018] Protein of unknown function (DUF667); [PTHR12458] ORF PROTEIN; [KOG3213] Transcription factor IIB21.000.6201
11 Mapoly0146s0044 -21.000.5661
12 Mapoly0114s0031 -22.140.6641
13 Mapoly0106s0044 [PF03980] Nnf126.060.6500
14 Mapoly0022s0110 [GO:0005737] cytoplasm; [GO:0006974] response to DNA damage stimulus; [GO:0006281] DNA repair; [PF03652] Uncharacterised protein family (UPF0081); [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006310] DNA recombination27.710.6019
15 Mapoly0013s0055 [PTHR13168:SF0] SUBFAMILY NOT NAMED; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR13168] ASSOCIATE OF C-MYC (AMY-1); [GO:0003713] transcription coactivator activity27.820.6289
16 Mapoly0054s0012 -27.960.6174
17 Mapoly0035s0021 [PF12780] P-loop containing dynein motor region D4; [PF12774] Hydrolytic ATP binding site of dynein motor region D1; [PF12775] P-loop containing dynein motor region D3; [GO:0030286] dynein complex; [PTHR10676] DYNEIN HEAVY CHAIN FAMILY PROTEIN; [PF03028] Dynein heavy chain and region D6 of dynein motor; [KOG3595] Dyneins, heavy chain; [PF12777] Microtubule-binding stalk of dynein motor; [GO:0007018] microtubule-based movement; [PF12781] ATP-binding dynein motor region D5; [PF08393] Dynein heavy chain, N-terminal region 2; [GO:0003777] microtubule motor activity28.980.6338
18 Mapoly0087s0012 [PF06508] Queuosine biosynthesis protein QueC31.620.5918
19 Mapoly0077s0044 [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE31.750.6306
20 Mapoly0013s0198 -37.150.6126
21 Mapoly0209s0005 [PTHR12689] A1 CISTRON SPLICING FACTOR AAR2-RELATED; [PF05282] AAR2 protein; [K13205] A1 cistron-splicing factor AAR2; [KOG3937] mRNA splicing factor37.700.6132
22 Mapoly0054s0023 [PTHR24320] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [KOG1208] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); [PF00106] short chain dehydrogenase38.260.6489
23 Mapoly0054s0011 [PF06220] U1 zinc finger; [K13152] U11/U12 small nuclear ribonucleoprotein 20 kDa protein; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0008270] zinc ion binding; [KOG3454] U1 snRNP-specific protein C; [PTHR16465] NUCLEASE-RELATED; [GO:0046872] metal ion binding; [PTHR16465:SF0] SUBFAMILY NOT NAMED39.500.6327
24 Mapoly0007s0006 [PTHR21068] FAMILY NOT NAMED; [PTHR21068:SF3] GB DEF: HYPOTHETICAL PROTEIN39.950.5678
25 Mapoly0004s0023 -40.890.5597
26 Mapoly0001s0064 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0008173] RNA methyltransferase activity; [PTHR12029] RNA METHYLTRANSFERASE; [KOG0838] RNA Methylase, SpoU family; [PF00588] SpoU rRNA Methylase family47.430.6521
27 Mapoly0093s0007 [GO:0016020] membrane; [GO:0008137] NADH dehydrogenase (ubiquinone) activity; [PTHR12910] NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2; [GO:0009055] electron carrier activity; [PF05071] NADH ubiquinone oxidoreductase subunit NDUFA12; [PTHR12910:SF1] NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.248.960.5799
28 Mapoly0008s0073 [PTHR14604:SF3] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [KOG0285] Pleiotropic regulator 1; [PTHR14604] WD40 REPEAT PF20; [PF00400] WD domain, G-beta repeat49.480.5959
29 Mapoly0030s0111 -52.230.5308
30 Mapoly0101s0001 [PTHR24414] FAMILY NOT NAMED; [GO:0005515] protein binding; [PTHR24414:SF14] SUBFAMILY NOT NAMED; [PF01344] Kelch motif52.740.6145
31 Mapoly0027s0146 -58.970.6285
32 Mapoly0111s0006 -59.620.5834
33 Mapoly0013s0143 [GO:0003723] RNA binding; [PF05634] APO RNA-binding; [PTHR10388] EUKARYOTIC TRANSLATION INITIATION FACTOR SUI160.790.5684
34 Mapoly0001s0037 [PTHR12864] RAN BINDING PROTEIN 9-RELATED; [KOG2659] LisH motif-containing protein; [PF10607] CTLH/CRA C-terminal to LisH motif domain64.160.6137
35 Mapoly0075s0082 -64.810.5620
36 Mapoly0080s0043 [PTHR11895] AMIDASE; [GO:0016884] carbon-nitrogen ligase activity, with glutamine as amido-N-donor; [KOG1212] Amidases; [PF01425] Amidase64.820.5063
37 Mapoly0004s0008 -65.190.6294
38 Mapoly0071s0039 [GO:0006284] base-excision repair; [GO:0006289] nucleotide-excision repair; [GO:0008270] zinc ion binding; [GO:0003906] DNA-(apurinic or apyrimidinic site) lyase activity; [GO:0016799] hydrolase activity, hydrolyzing N-glycosyl compounds; [GO:0003684] damaged DNA binding; [PF06831] Formamidopyrimidine-DNA glycosylase H2TH domain; [PF01149] Formamidopyrimidine-DNA glycosylase N-terminal domain; [PTHR22993] FORMAMIDOPYRIMIDINE-DNA GLYCOSYLASE68.250.4817
39 Mapoly0153s0025 -68.590.5387
40 Mapoly0102s0011 [PTHR31394] FAMILY NOT NAMED; [PF11712] Endoplasmic reticulum-based factor for assembly of V-ATPase68.920.5500
41 Mapoly0052s0093 [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR10108] METHYLTRANSFERASE; [PF01209] ubiE/COQ5 methyltransferase family; [K06127] ubiquinone biosynthesis methyltransferase [EC:2.1.1.-]; [PTHR10108:SF24] UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFERASE; [KOG1540] Ubiquinone biosynthesis methyltransferase COQ573.270.5855
42 Mapoly0069s0013 [GO:0005524] ATP binding; [GO:0006165] nucleoside diphosphate phosphorylation; [GO:0004550] nucleoside diphosphate kinase activity; [PF00334] Nucleoside diphosphate kinase; [K00940] nucleoside-diphosphate kinase [EC:2.7.4.6]; [PTHR11349] NUCLEOSIDE DIPHOSPHATE KINASE; [PF05186] Dpy-30 motif; [GO:0006241] CTP biosynthetic process; [GO:0006228] UTP biosynthetic process; [KOG0888] Nucleoside diphosphate kinase; [2.7.4.6] Nucleoside-diphosphate kinase.; [GO:0006183] GTP biosynthetic process74.160.5739
43 Mapoly0001s0015 [PTHR13555] C2H2 ZINC FINGER CGI-62-RELATED74.330.6151
44 Mapoly0103s0016 [K10840] centrin-2; [KOG0028] Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein; [PTHR23050] CALCIUM BINDING PROTEIN; [PF13499] EF-hand domain pair; [PF13833] EF-hand domain pair; [GO:0005509] calcium ion binding77.210.6175
45 Mapoly0112s0058 [PTHR31305] FAMILY NOT NAMED; [PF14712] Snapin/Pallidin; [GO:0031083] BLOC-1 complex; [GO:0006886] intracellular protein transport78.750.5712
46 Mapoly0101s0017 [KOG1294] Apurinic/apyrimidinic endonuclease and related enzymes; [PTHR22748:SF1] AP ENDONUCLEASE; [GO:0006281] DNA repair; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE79.250.6257
47 Mapoly0109s0026 [GO:0005515] protein binding; [KOG1446] Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; [PTHR19861] WD40 REPEAT PROTEIN SWD2; [PF00400] WD domain, G-beta repeat80.030.5966
48 Mapoly0118s0024 [PTHR22840] FAMILY NOT NAMED; [GO:0005515] protein binding; [K14406] cleavage stimulation factor subunit 1; [KOG0640] mRNA cleavage stimulating factor complex; subunit 1; [PF00400] WD domain, G-beta repeat81.420.5934
49 Mapoly0005s0179 [K11877] proteasome assembly chaperone 3; [PF10178] Uncharacterised conserved protein (DUF2372); [KOG4828] Uncharacterized conserved protein; [PTHR31051] FAMILY NOT NAMED82.510.5939
50 Mapoly0058s0033 [PTHR20383] FAMILY NOT NAMED; [KOG2424] Protein involved in transcription start site selection; [GO:0004721] phosphoprotein phosphatase activity; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF04722] Ssu72-like protein86.950.6159
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