Guide Gene

Gene ID
Mapoly0022s0110
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005737] cytoplasm; [GO:0006974] response to DNA damage stimulus; [GO:0006281] DNA repair; [PF03652] Uncharacterised protein family (UPF0081); [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006310] DNA recombination

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0022s0110 [GO:0005737] cytoplasm; [GO:0006974] response to DNA damage stimulus; [GO:0006281] DNA repair; [PF03652] Uncharacterised protein family (UPF0081); [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0006310] DNA recombination 0.00 1.0000
1 Mapoly0013s0055 [PTHR13168:SF0] SUBFAMILY NOT NAMED; [GO:0006355] regulation of transcription, DNA-dependent; [PTHR13168] ASSOCIATE OF C-MYC (AMY-1); [GO:0003713] transcription coactivator activity3.740.6644
2 Mapoly0054s0012 -4.690.6614
3 Mapoly0087s0012 [PF06508] Queuosine biosynthesis protein QueC9.490.6244
4 Mapoly0071s0005 [GO:0006396] RNA processing; [PF01137] RNA 3'-terminal phosphate cyclase; [PF05189] RNA 3'-terminal phosphate cyclase (RTC), insert domain; [6.5.1.4] RNA-3'-phosphate cyclase.; [KOG3980] RNA 3'-terminal phosphate cyclase; [PTHR11096:SF0] SUBFAMILY NOT NAMED; [PTHR11096] RNA 3' TERMINAL PHOSPHATE CYCLASE; [K01974] RNA 3'-terminal phosphate cyclase [EC:6.5.1.4]9.640.5924
5 Mapoly0002s0185 [GO:0046836] glycolipid transport; [PF08718] Glycolipid transfer protein (GLTP); [GO:0005737] cytoplasm; [PTHR10219] GLYCOLIPID TRANSFER PROTEIN-RELATED; [GO:0051861] glycolipid binding; [KOG4189] Uncharacterized conserved protein; [GO:0017089] glycolipid transporter activity11.830.6565
6 Mapoly0037s0142 -12.370.6577
7 Mapoly0086s0002 [PF03479] Domain of unknown function (DUF296)14.490.6195
8 Mapoly0061s0117 -20.640.6425
9 Mapoly0033s0006 -20.860.6073
10 Mapoly0013s0198 -23.750.6111
11 Mapoly0014s0191 [GO:0006355] regulation of transcription, DNA-dependent; [PTHR15970] FAMILY NOT NAMED; [GO:0032783] ELL-EAF complex; [KOG4795] Protein associated with transcriptional elongation factor ELL; [PTHR15970:SF2] GB DEF: HYPOTHETICAL PROTEIN F23N20.7 (AT1G71080/F23N20_7); [PF09816] RNA polymerase II transcription elongation factor24.080.5963
12 Mapoly0159s0025 [GO:0016020] membrane; [PTHR10027] CALCIUM-ACTIVATED POTASSIUM CHANNEL ALPHA CHAIN; [PTHR10027:SF10] CATION CHANNEL FAMILY PROTEIN-RELATED; [PF00520] Ion transport protein; [GO:0006813] potassium ion transport; [GO:0055085] transmembrane transport; [GO:0015269] calcium-activated potassium channel activity; [PF03493] Calcium-activated BK potassium channel alpha subunit; [GO:0006811] ion transport; [GO:0005216] ion channel activity27.020.6511
13 Mapoly0147s0008 [GO:0009058] biosynthetic process; [PF02911] Formyl transferase, C-terminal domain; [PTHR11138] METHIONYL-TRNA FORMYLTRANSFERASE; [GO:0016742] hydroxymethyl-, formyl- and related transferase activity; [PTHR11138:SF0] SUBFAMILY NOT NAMED27.710.6019
14 Mapoly0020s0061 [PTHR12621] CYSTEINE AND HISTIDINE-RICH DOMAIN (CHORD)-CONTAINING PROTEIN; [PF04968] CHORD; [K13458] disease resistance protein28.770.6050
15 Mapoly0021s0071 [GO:0004843] ubiquitin-specific protease activity; [K05609] ubiquitin carboxyl-terminal hydrolase L3 [EC:3.4.19.12]; [PTHR10589] UBIQUITIN CARBOXYL-TERMINAL HYDROLASE; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0005622] intracellular; [3.4.19.12] Ubiquitinyl hydrolase 1.; [PF01088] Ubiquitin carboxyl-terminal hydrolase, family 1; [KOG1415] Ubiquitin C-terminal hydrolase UCHL129.730.5914
16 Mapoly0001s0244 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding29.820.6353
17 Mapoly0060s0102 [PTHR12327:SF0] SUBFAMILY NOT NAMED; [PTHR12327] UNCHARACTERIZED; [GO:0071929] alpha-tubulin acetylation; [GO:0019799] tubulin N-acetyltransferase activity; [KOG4601] Uncharacterized conserved protein; [PF05301] Touch receptor neuron protein Mec-1730.200.6070
18 Mapoly0207s0011 [KOG0114] Predicted RNA-binding protein (RRM superfamily); [PTHR22630:SF0] SUBFAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K12833] pre-mRNA branch site protein p14; [PTHR22630] PRE-MRNA BRANCH SITE PROTEIN; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)33.700.6337
19 Mapoly0001s0091 [PF11595] Protein of unknown function (DUF3245)36.500.5871
20 Mapoly0182s0010 [GO:0005515] protein binding; [K03030] 26S proteasome regulatory subunit N11; [PF13012] Maintenance of mitochondrial structure and function; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1555] 26S proteasome regulatory complex, subunit RPN11; [PTHR10410] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 -RELATED; [PTHR10410:SF5] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 1439.370.6006
21 Mapoly0102s0011 [PTHR31394] FAMILY NOT NAMED; [PF11712] Endoplasmic reticulum-based factor for assembly of V-ATPase41.020.5742
22 Mapoly0114s0003 [PTHR13379] UNCHARACTERIZED DUF1308; [PF07000] Protein of unknown function (DUF1308); [KOG4529] Uncharacterized conserved protein41.180.5730
23 Mapoly0084s0053 [K10606] E3 ubiquitin-protein ligase FANCL [EC:6.3.2.19]; [6.3.2.19] Ubiquitin--protein ligase.; [GO:0006281] DNA repair; [GO:0043240] Fanconi anaemia nuclear complex; [PTHR13206:SF0] SUBFAMILY NOT NAMED; [PTHR13206] UBIQUITIN LIGASE PROTEIN PHF9 (FANCONI ANEMIA GROUP L PROTEIN); [GO:0004842] ubiquitin-protein ligase activity; [PF09765] WD-repeat region; [PF11793] FANCL C-terminal domain; [KOG3268] Predicted E3 ubiquitin ligase41.500.6034
24 Mapoly0143s0033 -42.950.5808
25 Mapoly0077s0044 [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE45.300.6041
26 Mapoly0001s0037 [PTHR12864] RAN BINDING PROTEIN 9-RELATED; [KOG2659] LisH motif-containing protein; [PF10607] CTLH/CRA C-terminal to LisH motif domain46.580.6097
27 Mapoly0033s0042 [PTHR13281:SF0] SUBFAMILY NOT NAMED; [KOG4478] Uncharacterized membrane protein; [PTHR13281] UNCHARACTERIZED; [PF06979] Protein of unknown function (DUF1301)48.150.5648
28 Mapoly0044s0110 -48.990.5651
29 Mapoly0004s0023 -50.600.5508
30 Mapoly0083s0017 -53.440.6054
31 Mapoly0075s0017 [GO:0006825] copper ion transport; [PF05051] Cytochrome C oxidase copper chaperone (COX17); [PTHR16719] CYTOCHROME C OXIDASE COPPER CHAPERONE; [GO:0005507] copper ion binding; [GO:0005758] mitochondrial intermembrane space; [K02260] cytochrome c oxidase subunit XVII assembly protein; [GO:0016531] copper chaperone activity53.670.5945
32 Mapoly0048s0065 [KOG1672] ATP binding protein; [GO:0045454] cell redox homeostasis; [PTHR21148] PHOSDUCIN-RELATED; [PF00085] Thioredoxin53.960.5997
33 Mapoly0006s0029 [PF08449] UAA transporter family; [KOG1581] UDP-galactose transporter related protein; [PTHR10778:SF10] SOLUTE CARRIER FAMILY 35 MEMBER B1 (UDP-GALACTOSE TRANSPORTER-RELATED PROTEIN 1)(UGTREL1); [GO:0055085] transmembrane transport; [PTHR10778] SOLUTE CARRIER FAMILY 35 MEMBER B56.790.5191
34 Mapoly0072s0021 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN57.830.5851
35 Mapoly0094s0075 [KOG2819] Uncharacterized conserved protein; [PF03676] Uncharacterised protein family (UPF0183); [PTHR13465] UPF0183 PROTEIN58.210.6135
36 Mapoly0004s0057 [PF06966] Protein of unknown function (DUF1295); [KOG4650] Predicted steroid reductase; [PTHR32251] FAMILY NOT NAMED58.580.5628
37 Mapoly0023s0023 [PTHR11842] MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2; [PTHR11842:SF10] MITOTIC SPINDLE ASSEMBLY CHECKPOINT PROTEIN MAD2B; [PF02301] HORMA domain; [KOG3186] Mitotic spindle checkpoint protein; [K13728] mitotic spindle assembly checkpoint protein MAD2B59.900.5579
38 Mapoly0054s0011 [PF06220] U1 zinc finger; [K13152] U11/U12 small nuclear ribonucleoprotein 20 kDa protein; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [GO:0008270] zinc ion binding; [KOG3454] U1 snRNP-specific protein C; [PTHR16465] NUCLEASE-RELATED; [GO:0046872] metal ion binding; [PTHR16465:SF0] SUBFAMILY NOT NAMED60.170.6038
39 Mapoly0102s0003 [K01207] beta-N-acetylhexosaminidase [EC:3.2.1.52]; [PF00933] Glycosyl hydrolase family 3 N terminal domain; [3.2.1.52] Beta-N-acetylhexosaminidase.; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PTHR30480] BETA-HEXOSAMINIDASE-RELATED61.160.5314
40 Mapoly0005s0179 [K11877] proteasome assembly chaperone 3; [PF10178] Uncharacterised conserved protein (DUF2372); [KOG4828] Uncharacterized conserved protein; [PTHR31051] FAMILY NOT NAMED61.340.6033
41 Mapoly0013s0132 [PF04117] Mpv17 / PMP22 family; [GO:0016021] integral to membrane; [PTHR11266:SF7] 22 KDA PEROXISOMAL MEMBRANE PROTEIN; [PTHR11266] PEROXISOMAL MEMBRANE PROTEIN 2, PXMP2 (MPV17); [KOG1944] Peroxisomal membrane protein MPV17 and related proteins64.950.5552
42 Mapoly0030s0062 [PF04969] CS domain; [PTHR12356] NUCLEAR MOVEMENT PROTEIN NUDC; [KOG2265] Nuclear distribution protein NUDC65.410.6030
43 Mapoly0089s0028 [PF13302] Acetyltransferase (GNAT) domain; [PTHR13256] N-ACETYLTRANSFERASE 9; [GO:0008080] N-acetyltransferase activity; [KOG4135] Predicted phosphoglucosamine acetyltransferase66.030.5323
44 Mapoly0085s0093 [PF09335] SNARE associated Golgi protein71.970.4988
45 Mapoly0093s0043 -73.270.6110
46 Mapoly0003s0128 -76.320.5967
47 Mapoly0102s0010 [PF10235] Microtubule-associated protein CRIPT; [KOG3476] Microtubule-associated protein CRIPT; [PTHR11800] DNA-DIRECTED RNA POLYMERASE83.720.5800
48 Mapoly0037s0049 [K06889] hemoglobin; [PF12695] Alpha/beta hydrolase family; [KOG4667] Predicted esterase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN84.380.5439
49 Mapoly0041s0133 [PF01426] BAH domain; [PF00628] PHD-finger; [GO:0005515] protein binding; [GO:0003682] chromatin binding; [PTHR12505] PHD FINGER TRANSCRIPTION FACTOR84.430.5916
50 Mapoly0016s0206 [GO:0005515] protein binding; [PF14560] Ubiquitin-like domain; [PF01302] CAP-Gly domain; [KOG3206] Alpha-tubulin folding cofactor B; [PTHR18916] DYNACTIN 1-RELATED MICROTUBULE-BINDING86.350.5918
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