Guide Gene
- Gene ID
- Mapoly0109s0026
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [GO:0005515] protein binding; [KOG1446] Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; [PTHR19861] WD40 REPEAT PROTEIN SWD2; [PF00400] WD domain, G-beta repeat
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0109s0026 [GO:0005515] protein binding; [KOG1446] Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; [PTHR19861] WD40 REPEAT PROTEIN SWD2; [PF00400] WD domain, G-beta repeat 0.00 1.0000 1 Mapoly0076s0002 [PTHR14854] NIF3L1BP1 PROTEIN-RELATED; [KOG3215] Uncharacterized conserved protein; [GO:0000445] THO complex part of transcription export complex; [GO:0006397] mRNA processing; [K13176] THO complex subunit 7; [PF05615] Tho complex subunit 7 1.41 0.7774 2 Mapoly0061s0117 - 3.46 0.7699 3 Mapoly0058s0033 [PTHR20383] FAMILY NOT NAMED; [KOG2424] Protein involved in transcription start site selection; [GO:0004721] phosphoprotein phosphatase activity; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF04722] Ssu72-like protein 4.90 0.7714 4 Mapoly0037s0122 [PTHR12777] SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2; [KOG3459] Small nuclear ribonucleoprotein (snRNP) Sm core protein; [GO:0030532] small nuclear ribonucleoprotein complex; [K11096] small nuclear ribonucleoprotein D2; [PF01423] LSM domain; [GO:0008380] RNA splicing 8.06 0.7829 5 Mapoly0005s0179 [K11877] proteasome assembly chaperone 3; [PF10178] Uncharacterised conserved protein (DUF2372); [KOG4828] Uncharacterized conserved protein; [PTHR31051] FAMILY NOT NAMED 8.49 0.7533 6 Mapoly0011s0105 [PTHR21242] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [GO:0006352] DNA-dependent transcription, initiation; [PTHR21242:SF0] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [K03134] transcription initiation factor TFIID subunit 10; [GO:0005634] nucleus; [PF03540] Transcription initiation factor TFIID 23-30kDa subunit 12.12 0.7627 7 Mapoly0086s0082 [KOG3391] Transcriptional co-repressor component; [PF06487] Sin3 associated polypeptide p18 (SAP18); [K14324] histone deacetylase complex subunit SAP18; [PTHR13082] SAP18 13.60 0.7695 8 Mapoly0107s0018 [GO:0015035] protein disulfide oxidoreductase activity; [PTHR13887] GLUTATHIONE S-TRANSFERASE KAPPA; [PF01323] DSBA-like thioredoxin domain 16.25 0.7144 9 Mapoly0207s0011 [KOG0114] Predicted RNA-binding protein (RRM superfamily); [PTHR22630:SF0] SUBFAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K12833] pre-mRNA branch site protein p14; [PTHR22630] PRE-MRNA BRANCH SITE PROTEIN; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 16.25 0.7392 10 Mapoly0058s0062 [GO:0032502] developmental process; [PF00022] Actin; [GO:0005634] nucleus; [GO:0006325] chromatin organization; [PTHR11937] ACTIN; [KOG0676] Actin and related proteins 16.88 0.6474 11 Mapoly0053s0055 [KOG0871] Class 2 transcription repressor NC2, beta subunit (Dr1); [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular 16.97 0.7249 12 Mapoly0054s0132 [GO:0003677] DNA binding; [K03007] DNA-directed RNA polymerases I, II, and III subunit RPABC5; [PF01194] RNA polymerases N / 8 kDa subunit; [GO:0006351] transcription, DNA-dependent; [KOG3497] DNA-directed RNA polymerase, subunit RPB10; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR23413] 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N 18.38 0.7392 13 Mapoly0022s0103 [KOG4054] Uncharacterized conserved protein; [PTHR20955] UNCHARACTERIZED; [GO:0005789] endoplasmic reticulum membrane; [PF07086] Protein of unknown function (DUF1352); [GO:0007029] endoplasmic reticulum organization 18.71 0.7110 14 Mapoly0214s0009 [KOG3467] Histone H4; [GO:0003677] DNA binding; [PTHR10484] HISTONE H4; [K11254] histone H4; [PF00125] Core histone H2A/H2B/H3/H4 18.76 0.7414 15 Mapoly0001s0403 [K12832] splicing factor 3B subunit 5; [PF07189] Splicing factor 3B subunit 10 (SF3b10); [PTHR20978:SF0] SUBFAMILY NOT NAMED; [KOG3485] Uncharacterized conserved protein; [PTHR20978] FAMILY NOT NAMED 18.97 0.7688 16 Mapoly0008s0084 [K12622] U6 snRNA-associated Sm-like protein LSm3; [PTHR13110] U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3; [KOG3460] Small nuclear ribonucleoprotein (snRNP) LSM3; [PF01423] LSM domain 19.80 0.7090 17 Mapoly0157s0022 [PTHR13889:SF11] SUBFAMILY NOT NAMED; [K10599] pre-mRNA-processing factor 19 [EC:6.3.2.19]; [PF08606] Prp19/Pso4-like; [GO:0005515] protein binding; [KOG0289] mRNA splicing factor; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR13889] PRE-MRNA SPLICING FACTOR PRP19-RELATED; [PF00400] WD domain, G-beta repeat 20.78 0.7100 18 Mapoly0007s0225 - 22.76 0.6964 19 Mapoly0009s0244 [PTHR13420:SF0] SUBFAMILY NOT NAMED; [PTHR13420] UNCHARACTERIZED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 24.74 0.6714 20 Mapoly0013s0171 [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [PF03661] Uncharacterised protein family (UPF0121); [GO:0016021] integral to membrane 27.22 0.7207 21 Mapoly0001s0266 [GO:0003677] DNA binding; [PF01192] RNA polymerase Rpb6; [KOG3405] RNA polymerase subunit K; [PTHR10773] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [K03014] DNA-directed RNA polymerases I, II, and III subunit RPABC2 27.66 0.7527 22 Mapoly0013s0162 [GO:0005515] protein binding; [PF02201] SWIB/MDM2 domain; [PTHR13844] BRG-1 ASSOCIATED FACTOR 60 (BAF60) 28.11 0.7464 23 Mapoly0063s0065 [PTHR23177:SF1] MKIAA1688 PROTEIN; [PTHR23177] MKIAA1688 PROTEIN; [PF00784] MyTH4 domain; [GO:0005856] cytoskeleton 28.98 0.6934 24 Mapoly0013s0130 [PF11221] Subunit 21 of Mediator complex; [PTHR13381] RNA POLYMERASE II HOLOENZYME COMPONENT SRB7; [KOG1510] RNA polymerase II holoenzyme and mediator subcomplex, subunit SURB7/SRB7 29.50 0.7065 25 Mapoly0054s0111 [KOG3371] Uncharacterized conserved protein; [PTHR15854] THAP4 PROTEIN; [PF08768] Domain of unknown function (DUF1794) 30.33 0.6897 26 Mapoly0170s0033 [PTHR11669] REPLICATION FACTOR C / DNA POLYMERASE III GAMMA-TAU SUBUNIT; [KOG2035] Replication factor C, subunit RFC3; [PF13177] DNA polymerase III, delta subunit; [PTHR11669:SF1] DNA POLYMERASE III SUBUNIT GAMMA/TAU; [PF08542] Replication factor C C-terminal domain; [K10756] replication factor C subunit 3/5 30.85 0.7025 27 Mapoly0038s0031 [GO:0005874] microtubule; [PF02970] Tubulin binding cofactor A; [GO:0007021] tubulin complex assembly; [PTHR21500] TUBULIN-SPECIFIC CHAPERONE A; [KOG3470] Beta-tubulin folding cofactor A; [PTHR21500:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding 32.12 0.7119 28 Mapoly0216s0010 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0869] CCAAT-binding factor, subunit A (HAP3) 32.17 0.7323 29 Mapoly0006s0079 [K04798] prefoldin beta subunit; [GO:0016272] prefoldin complex; [PTHR21431] PREFOLDIN SUBUNIT 6; [PTHR21431:SF0] SUBFAMILY NOT NAMED; [GO:0006457] protein folding; [KOG3478] Prefoldin subunit 6, KE2 family; [GO:0051082] unfolded protein binding; [PF01920] Prefoldin subunit 37.56 0.7263 30 Mapoly0006s0194 [PF03145] Seven in absentia protein family; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0005634] nucleus; [PTHR10315] SEVEN IN ABSENTIA HOMOLOG; [GO:0007275] multicellular organismal development; [KOG3002] Zn finger protein 39.05 0.6771 31 Mapoly0014s0198 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [PTHR21528:SF0] SUBFAMILY NOT NAMED; [K11778] cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-]; [PTHR21528] UNCHARACTERIZED 39.77 0.6288 32 Mapoly0002s0066 [GO:0006260] DNA replication; [GO:0005634] nucleus; [PF04081] DNA polymerase delta, subunit 4; [PTHR14303] DNA POLYMERASE DELTA SUBUNIT 4; [K03505] DNA polymerase delta subunit 4 40.89 0.6510 33 Mapoly0052s0093 [GO:0008168] methyltransferase activity; [2.1.1.-] Methyltransferases.; [PTHR10108] METHYLTRANSFERASE; [PF01209] ubiE/COQ5 methyltransferase family; [K06127] ubiquinone biosynthesis methyltransferase [EC:2.1.1.-]; [PTHR10108:SF24] UBIQUINONE/MENAQUINONE BIOSYNTHESIS METHYLTRANSFERASE; [KOG1540] Ubiquinone biosynthesis methyltransferase COQ5 41.81 0.6638 34 Mapoly0111s0006 - 43.23 0.6502 35 Mapoly0029s0061 [GO:0016020] membrane; [PF01956] Integral membrane protein DUF106; [PTHR13116] UNCHARACTERIZED; [KOG3188] Uncharacterized conserved protein 44.73 0.7119 36 Mapoly0004s0008 - 44.87 0.7041 37 Mapoly0001s0064 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0008173] RNA methyltransferase activity; [PTHR12029] RNA METHYLTRANSFERASE; [KOG0838] RNA Methylase, SpoU family; [PF00588] SpoU rRNA Methylase family 46.99 0.7298 38 Mapoly0056s0015 [PTHR13353:SF7] SUBFAMILY NOT NAMED; [PF01940] Integral membrane protein DUF92; [GO:0016021] integral to membrane; [PTHR13353] FAMILY NOT NAMED; [KOG4491] Predicted membrane protein 48.91 0.6362 39 Mapoly0114s0041 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0879] U-snRNP-associated cyclophilin type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [K09567] peptidyl-prolyl isomerase H (cyclophilin H) [EC:5.2.1.8]; [PTHR11071:SF58] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE H, PPIH 48.93 0.6921 40 Mapoly0014s0106 [KOG3172] Small nuclear ribonucleoprotein Sm D3; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain 49.07 0.7387 41 Mapoly0001s0452 [KOG0798] Uncharacterized conserved protein; [PTHR13395:SF6] SUBFAMILY NOT NAMED; [PF09724] Uncharacterized conserved protein (DUF2036); [K11271] sister chromatid cohesion protein DCC1; [PTHR13395] SISTER CHROMATID COHESION PROTEIN DCC1-RELATED 49.72 0.6382 42 Mapoly0049s0105 [GO:0016272] prefoldin complex; [KOG4098] Molecular chaperone Prefoldin, subunit 2; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding; [PTHR13303] PREFOLDIN SUBUNIT 2; [PF01920] Prefoldin subunit 50.91 0.6328 43 Mapoly0011s0044 [K03132] transcription initiation factor TFIID subunit 7; [PF04658] TAFII55 protein conserved region; [PTHR12228] TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED; [GO:0005669] transcription factor TFIID complex; [GO:0006367] transcription initiation from RNA polymerase II promoter 50.95 0.6907 44 Mapoly0127s0049 [K04649] ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:6.3.2.19]; [GO:0005515] protein binding; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0418] Ubiquitin-protein ligase; [PF00627] UBA/TS-N domain; [PTHR24067:SF29] UBIQUITIN-CONJUGATING ENZYME E2 K; [PF00179] Ubiquitin-conjugating enzyme 51.30 0.6822 45 Mapoly0032s0020 - 53.67 0.5978 46 Mapoly0056s0045 [PTHR12864] RAN BINDING PROTEIN 9-RELATED; [PF10607] CTLH/CRA C-terminal to LisH motif domain; [KOG2659] LisH motif-containing protein; [PF08513] LisH 56.55 0.6570 47 Mapoly0029s0119 - 56.86 0.6831 48 Mapoly0005s0172 [PTHR24322] FAMILY NOT NAMED; [K04708] 3-dehydrosphinganine reductase [EC:1.1.1.102]; [KOG1210] Predicted 3-ketosphinganine reductase; [1.1.1.102] 3-dehydrosphinganine reductase.; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase 57.23 0.6203 49 Mapoly0027s0072 [PF13716] Divergent CRAL/TRIO domain; [KOG2633] Hismacro and SEC14 domain-containing proteins; [PTHR11106] GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED 57.24 0.6539 50 Mapoly0059s0090 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein 57.24 0.6765