Guide Gene

Gene ID
Mapoly0011s0105
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR21242] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [GO:0006352] DNA-dependent transcription, initiation; [PTHR21242:SF0] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [K03134] transcription initiation factor TFIID subunit 10; [GO:0005634] nucleus; [PF03540] Transcription initiation factor TFIID 23-30kDa subunit

Coexpressed Gene List

Search : Show :

Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0011s0105 [PTHR21242] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [GO:0006352] DNA-dependent transcription, initiation; [PTHR21242:SF0] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [K03134] transcription initiation factor TFIID subunit 10; [GO:0005634] nucleus; [PF03540] Transcription initiation factor TFIID 23-30kDa subunit 0.00 1.0000
1 Mapoly0058s0033 [PTHR20383] FAMILY NOT NAMED; [KOG2424] Protein involved in transcription start site selection; [GO:0004721] phosphoprotein phosphatase activity; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF04722] Ssu72-like protein1.410.8188
2 Mapoly0087s0020 [KOG1781] Small Nuclear ribonucleoprotein splicing factor; [K12626] U6 snRNA-associated Sm-like protein LSm7; [PF01423] LSM domain; [PTHR10553] SMALL NUCLEAR RIBONUCLEOPROTEIN6.710.8235
3 Mapoly0127s0049 [K04649] ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:6.3.2.19]; [GO:0005515] protein binding; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0418] Ubiquitin-protein ligase; [PF00627] UBA/TS-N domain; [PTHR24067:SF29] UBIQUITIN-CONJUGATING ENZYME E2 K; [PF00179] Ubiquitin-conjugating enzyme9.490.7640
4 Mapoly0001s0403 [K12832] splicing factor 3B subunit 5; [PF07189] Splicing factor 3B subunit 10 (SF3b10); [PTHR20978:SF0] SUBFAMILY NOT NAMED; [KOG3485] Uncharacterized conserved protein; [PTHR20978] FAMILY NOT NAMED10.200.8110
5 Mapoly0025s0126 [KOG4764] Uncharacterized conserved protein; [PF05160] DSS1/SEM1 family; [PTHR16771:SF0] SUBFAMILY NOT NAMED; [PTHR16771] 26 PROTEASOME COMPLEX SUBUNIT DSS110.820.8142
6 Mapoly0061s0117 -10.950.7597
7 Mapoly0109s0026 [GO:0005515] protein binding; [KOG1446] Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; [PTHR19861] WD40 REPEAT PROTEIN SWD2; [PF00400] WD domain, G-beta repeat12.120.7627
8 Mapoly0048s0106 -12.370.7789
9 Mapoly0003s0072 [K06693] 26S proteasome non-ATPase regulatory subunit 9; [PTHR12651] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9; [PTHR12651:SF1] 26S PROTEASOME REGULATORY SUBUNIT P27; [KOG3129] 26S proteasome regulatory complex, subunit PSMD913.040.7783
10 Mapoly0008s0084 [K12622] U6 snRNA-associated Sm-like protein LSm3; [PTHR13110] U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3; [KOG3460] Small nuclear ribonucleoprotein (snRNP) LSM3; [PF01423] LSM domain15.170.7348
11 Mapoly0064s0055 [PF13656] RNA polymerase Rpb3/Rpb11 dimerisation domain; [K03008] DNA-directed RNA polymerase II subunit RPB11; [PTHR13946] DNA-DIRECTED RNA POLYMERASE I,II,III; [KOG4392] RNA polymerase, subunit L16.120.8070
12 Mapoly0041s0007 [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3048] Molecular chaperone Prefoldin, subunit 5; [GO:0006457] protein folding; [PTHR12674] PREFOLDIN SUBUNIT 5; [GO:0051082] unfolded protein binding; [K04797] prefoldin alpha subunit16.610.7986
13 Mapoly0207s0011 [KOG0114] Predicted RNA-binding protein (RRM superfamily); [PTHR22630:SF0] SUBFAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K12833] pre-mRNA branch site protein p14; [PTHR22630] PRE-MRNA BRANCH SITE PROTEIN; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)16.610.7617
14 Mapoly0029s0061 [GO:0016020] membrane; [PF01956] Integral membrane protein DUF106; [PTHR13116] UNCHARACTERIZED; [KOG3188] Uncharacterized conserved protein17.320.7735
15 Mapoly0029s0049 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016602] CCAAT-binding factor complex; [KOG1657] CCAAT-binding factor, subunit C (HAP5); [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR10252:SF8] TRANSCRIPTIONAL ACTIVATOR HAP5; [GO:0005622] intracellular; [PTHR10252] HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED17.940.7870
16 Mapoly0166s0021 [PTHR12377] UNCHARACTERIZED; [KOG3381] Uncharacterized conserved protein; [PF01883] Domain of unknown function DUF5920.000.7583
17 Mapoly0086s0082 [KOG3391] Transcriptional co-repressor component; [PF06487] Sin3 associated polypeptide p18 (SAP18); [K14324] histone deacetylase complex subunit SAP18; [PTHR13082] SAP1821.630.7697
18 Mapoly0016s0054 [K12624] U6 snRNA-associated Sm-like protein LSm5; [PTHR20971] U6 SNRNA-ASSOCIATED PROTEIN; [KOG1775] U6 snRNA-associated Sm-like protein; [PF01423] LSM domain22.740.7745
19 Mapoly0033s0142 -23.070.7687
20 Mapoly0127s0039 [KOG1774] Small nuclear ribonucleoprotein E; [GO:0005681] spliceosomal complex; [K11097] small nuclear ribonucleoprotein E; [GO:0000398] mRNA splicing, via spliceosome; [PTHR11193] SMALL NUCLEAR RIBONUCLEOPROTEIN E; [PTHR11193:SF0] SMALL NUCLEAR RIBONUCLEOPROTEIN E; [PF01423] LSM domain23.150.7792
21 Mapoly0009s0244 [PTHR13420:SF0] SUBFAMILY NOT NAMED; [PTHR13420] UNCHARACTERIZED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)26.830.6779
22 Mapoly0007s0225 -28.300.7049
23 Mapoly0012s0137 [PTHR23027:SF2] gb def: Predicted protein; [PTHR23027] UNCHARACTERIZED; [GO:0005739] mitochondrion; [PF02297] Cytochrome oxidase c subunit VIb; [GO:0004129] cytochrome-c oxidase activity28.930.7567
24 Mapoly0005s0179 [K11877] proteasome assembly chaperone 3; [PF10178] Uncharacterised conserved protein (DUF2372); [KOG4828] Uncharacterized conserved protein; [PTHR31051] FAMILY NOT NAMED30.300.7323
25 Mapoly0006s0079 [K04798] prefoldin beta subunit; [GO:0016272] prefoldin complex; [PTHR21431] PREFOLDIN SUBUNIT 6; [PTHR21431:SF0] SUBFAMILY NOT NAMED; [GO:0006457] protein folding; [KOG3478] Prefoldin subunit 6, KE2 family; [GO:0051082] unfolded protein binding; [PF01920] Prefoldin subunit30.330.7634
26 Mapoly0055s0054 [PTHR13476] UNCHARACTERIZED; [PTHR13476:SF0] SUBFAMILY NOT NAMED; [PF09340] Histone acetyltransferase subunit NuA4; [K11344] chromatin modification-related protein EAF631.750.7422
27 Mapoly0003s0079 -36.030.7624
28 Mapoly0037s0122 [PTHR12777] SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2; [KOG3459] Small nuclear ribonucleoprotein (snRNP) Sm core protein; [GO:0030532] small nuclear ribonucleoprotein complex; [K11096] small nuclear ribonucleoprotein D2; [PF01423] LSM domain; [GO:0008380] RNA splicing38.240.7647
29 Mapoly0038s0031 [GO:0005874] microtubule; [PF02970] Tubulin binding cofactor A; [GO:0007021] tubulin complex assembly; [PTHR21500] TUBULIN-SPECIFIC CHAPERONE A; [KOG3470] Beta-tubulin folding cofactor A; [PTHR21500:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding39.200.7292
30 Mapoly0216s0010 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0869] CCAAT-binding factor, subunit A (HAP3)41.130.7534
31 Mapoly0044s0041 [K02734] 20S proteasome subunit beta 4 [EC:3.4.25.1]; [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF6] PROTEASOME SUBUNIT BETA TYPE 2; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [KOG0177] 20S proteasome, regulatory subunit beta type PSMB2/PRE1; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA42.710.7640
32 Mapoly0161s0025 -43.450.7660
33 Mapoly0021s0070 -46.950.7521
34 Mapoly0003s0235 [PTHR13636] UNCHARACTERIZED; [PF05251] Uncharacterised protein family (UPF0197); [KOG4452] Predicted membrane protein47.120.7667
35 Mapoly0013s0162 [GO:0005515] protein binding; [PF02201] SWIB/MDM2 domain; [PTHR13844] BRG-1 ASSOCIATED FACTOR 60 (BAF60)48.440.7542
36 Mapoly0054s0132 [GO:0003677] DNA binding; [K03007] DNA-directed RNA polymerases I, II, and III subunit RPABC5; [PF01194] RNA polymerases N / 8 kDa subunit; [GO:0006351] transcription, DNA-dependent; [KOG3497] DNA-directed RNA polymerase, subunit RPB10; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR23413] 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N50.600.7200
37 Mapoly0001s0266 [GO:0003677] DNA binding; [PF01192] RNA polymerase Rpb6; [KOG3405] RNA polymerase subunit K; [PTHR10773] DNA-DIRECTED RNA POLYMERASES I, II, AND III SUBUNIT RPABC2; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [K03014] DNA-directed RNA polymerases I, II, and III subunit RPABC252.020.7552
38 Mapoly0013s0171 [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [PF03661] Uncharacterised protein family (UPF0121); [GO:0016021] integral to membrane52.800.7172
39 Mapoly0008s0272 [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0863] 20S proteasome, regulatory subunit alpha type PSMA1/PRE5; [PTHR11599:SF10] PROTEASOME SUBUNIT ALPHA TYPE 3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA55.080.7425
40 Mapoly0050s0123 [PTHR18901] 2-DEOXYGLUCOSE-6-PHOSPHATE PHOSPHATASE 2; [KOG2914] Predicted haloacid-halidohydrolase and related hydrolases; [PF13419] Haloacid dehalogenase-like hydrolase55.860.7577
41 Mapoly0029s0010 [KOG0143] Iron/ascorbate family oxidoreductases; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN56.000.6570
42 Mapoly0092s0011 [PF06093] Spt4/RpoE2 zinc finger; [KOG3490] Transcription elongation factor SPT4; [PTHR12882:SF0] SUBFAMILY NOT NAMED; [PTHR12882] SUPPRESSOR OF TY 458.500.7236
43 Mapoly0014s0106 [KOG3172] Small nuclear ribonucleoprotein Sm D3; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain58.990.7563
44 Mapoly0059s0090 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein62.330.6942
45 Mapoly0058s0062 [GO:0032502] developmental process; [PF00022] Actin; [GO:0005634] nucleus; [GO:0006325] chromatin organization; [PTHR11937] ACTIN; [KOG0676] Actin and related proteins62.610.5952
46 Mapoly0166s0006 [PF06093] Spt4/RpoE2 zinc finger; [KOG3490] Transcription elongation factor SPT4; [PTHR12882:SF0] SUBFAMILY NOT NAMED; [PTHR12882] SUPPRESSOR OF TY 464.310.7331
47 Mapoly0004s0033 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR11599:SF16] PROTEASOME SUBUNIT ALPHA TYPE 2; [KOG0181] 20S proteasome, regulatory subunit alpha type PSMA2/PRE8; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [K02726] 20S proteasome subunit alpha 2 [EC:3.4.25.1]; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA65.170.7561
48 Mapoly0001s0456 [KOG3473] RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C; [K03872] transcription elongation factor B, polypeptide 1; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR20648] FAMILY NOT NAMED; [PF03931] Skp1 family, tetramerisation domain66.970.7478
49 Mapoly0107s0018 [GO:0015035] protein disulfide oxidoreductase activity; [PTHR13887] GLUTATHIONE S-TRANSFERASE KAPPA; [PF01323] DSBA-like thioredoxin domain67.500.6817
50 Mapoly0054s0023 [PTHR24320] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [KOG1208] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); [PF00106] short chain dehydrogenase67.750.7084
Showing 1 to 50 of 200 records
S