Guide Gene

Gene ID
Mapoly0038s0031
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0005874] microtubule; [PF02970] Tubulin binding cofactor A; [GO:0007021] tubulin complex assembly; [PTHR21500] TUBULIN-SPECIFIC CHAPERONE A; [KOG3470] Beta-tubulin folding cofactor A; [PTHR21500:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0038s0031 [GO:0005874] microtubule; [PF02970] Tubulin binding cofactor A; [GO:0007021] tubulin complex assembly; [PTHR21500] TUBULIN-SPECIFIC CHAPERONE A; [KOG3470] Beta-tubulin folding cofactor A; [PTHR21500:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding 0.00 1.0000
1 Mapoly0103s0016 [K10840] centrin-2; [KOG0028] Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein; [PTHR23050] CALCIUM BINDING PROTEIN; [PF13499] EF-hand domain pair; [PF13833] EF-hand domain pair; [GO:0005509] calcium ion binding1.000.8741
2 Mapoly0033s0143 [K03127] transcription initiation factor TFIID subunit 13; [KOG3901] Transcription initiation factor IID subunit; [PF02269] Transcription initiation factor IID, 18kD subunit; [GO:0006366] transcription from RNA polymerase II promoter; [PTHR11380] TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED1.410.8287
3 Mapoly0002s0185 [GO:0046836] glycolipid transport; [PF08718] Glycolipid transfer protein (GLTP); [GO:0005737] cytoplasm; [PTHR10219] GLYCOLIPID TRANSFER PROTEIN-RELATED; [GO:0051861] glycolipid binding; [KOG4189] Uncharacterized conserved protein; [GO:0017089] glycolipid transporter activity4.000.7768
4 Mapoly0025s0008 [PTHR11985:SF1] GLYCEROL-3-PHOSPHATE DEHYDROGENASE-RELATED; [GO:0055114] oxidation-reduction process; [PF01266] FAD dependent oxidoreductase; [KOG0042] Glycerol-3-phosphate dehydrogenase; [GO:0016491] oxidoreductase activity; [PTHR11985] GLYCEROL-3-PHOSPHATE DEHYDROGENASE; [1.1.5.3] Glycerol-3-phosphate dehydrogenase.; [K00111] glycerol-3-phosphate dehydrogenase [EC:1.1.5.3]4.000.7422
5 Mapoly0001s0037 [PTHR12864] RAN BINDING PROTEIN 9-RELATED; [KOG2659] LisH motif-containing protein; [PF10607] CTLH/CRA C-terminal to LisH motif domain5.480.7850
6 Mapoly0056s0015 [PTHR13353:SF7] SUBFAMILY NOT NAMED; [PF01940] Integral membrane protein DUF92; [GO:0016021] integral to membrane; [PTHR13353] FAMILY NOT NAMED; [KOG4491] Predicted membrane protein6.930.7058
7 Mapoly0063s0065 [PTHR23177:SF1] MKIAA1688 PROTEIN; [PTHR23177] MKIAA1688 PROTEIN; [PF00784] MyTH4 domain; [GO:0005856] cytoskeleton8.250.7419
8 Mapoly0003s0072 [K06693] 26S proteasome non-ATPase regulatory subunit 9; [PTHR12651] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9; [PTHR12651:SF1] 26S PROTEASOME REGULATORY SUBUNIT P27; [KOG3129] 26S proteasome regulatory complex, subunit PSMD99.540.7843
9 Mapoly0031s0081 [PF03151] Triose-phosphate Transporter family; [PTHR11132] SOLUTE CARRIER FAMILY 35; [KOG1441] Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter10.580.7311
10 Mapoly0054s0111 [KOG3371] Uncharacterized conserved protein; [PTHR15854] THAP4 PROTEIN; [PF08768] Domain of unknown function (DUF1794)10.950.7368
11 Mapoly0016s0005 [GO:0008565] protein transporter activity; [PTHR11753] CLATHRIN COAT ASSEMBLY PROTEIN; [KOG0934] Clathrin adaptor complex, small subunit; [K12403] AP-4 complex subunit sigma-1; [GO:0015031] protein transport; [PF01217] Clathrin adaptor complex small chain11.870.8032
12 Mapoly0021s0070 -12.040.7901
13 Mapoly0056s0045 [PTHR12864] RAN BINDING PROTEIN 9-RELATED; [PF10607] CTLH/CRA C-terminal to LisH motif domain; [KOG2659] LisH motif-containing protein; [PF08513] LisH16.520.7210
14 Mapoly0216s0010 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0869] CCAAT-binding factor, subunit A (HAP3)17.230.7755
15 Mapoly0008s0153 [K04554] ubiquitin-conjugating enzyme E2 J2 [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0894] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme; [PTHR24067:SF42] UBIQUITIN-CONJUGATING ENZYME E2 J220.780.7318
16 Mapoly0065s0048 [PTHR11060:SF0] PROTEIN MEMO1; [K06990] aspartate dehydrogenase [EC:1.4.1.21]; [PF01875] Memo-like protein; [KOG3086] Predicted dioxygenase; [PTHR11060] PROTEIN MEMO122.630.7971
17 Mapoly0001s0023 [PTHR11802:SF8] SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE D) (PLANTS); [PF00450] Serine carboxypeptidase; [3.4.16.5] Carboxypeptidase C.; [K13289] cathepsin A (carboxypeptidase C) [EC:3.4.16.5]; [PTHR11802] SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE; [KOG1282] Serine carboxypeptidases (lysosomal cathepsin A); [GO:0004185] serine-type carboxypeptidase activity; [GO:0006508] proteolysis23.490.6749
18 Mapoly0014s0194 [PTHR15722:SF2] WIMPLE/IFT172; [PTHR15722] IFT140/172-RELATED; [KOG3616] Selective LIM binding factor25.100.7361
19 Mapoly0005s0248 [PF10275] Peptidase C65 Otubain; [K09602] ubiquitin thioesterase protein OTUB1 [EC:3.4.-.-]; [PTHR12931] UBIQUITIN THIOLESTERASE PROTEIN OTUB; [3.4.-.-] Acting on peptide bonds (peptide hydrolases).; [KOG3991] Uncharacterized conserved protein26.150.6991
20 Mapoly0191s0007 [2.1.1.77] Protein-L-isoaspartate(D-aspartate) O-methyltransferase.; [GO:0004719] protein-L-isoaspartate (D-aspartate) O-methyltransferase activity; [KOG1661] Protein-L-isoaspartate(D-aspartate) O-methyltransferase; [PF01135] Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); [K00573] protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]; [PTHR11579] PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE; [GO:0006464] cellular protein modification process26.610.6945
21 Mapoly0192s0008 [PTHR12742] RNA-BINDING PROTEIN; [KOG1457] RNA binding protein (contains RRM repeats); [GO:0003676] nucleic acid binding; [PTHR12742:SF0] SUBFAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)26.660.6797
22 Mapoly0058s0033 [PTHR20383] FAMILY NOT NAMED; [KOG2424] Protein involved in transcription start site selection; [GO:0004721] phosphoprotein phosphatase activity; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF04722] Ssu72-like protein27.550.7349
23 Mapoly0029s0049 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016602] CCAAT-binding factor complex; [KOG1657] CCAAT-binding factor, subunit C (HAP5); [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR10252:SF8] TRANSCRIPTIONAL ACTIVATOR HAP5; [GO:0005622] intracellular; [PTHR10252] HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED27.930.7622
24 Mapoly0086s0082 [KOG3391] Transcriptional co-repressor component; [PF06487] Sin3 associated polypeptide p18 (SAP18); [K14324] histone deacetylase complex subunit SAP18; [PTHR13082] SAP1828.980.7525
25 Mapoly0109s0020 [KOG4172] Predicted E3 ubiquitin ligase; [PF13920] Zinc finger, C3HC4 type (RING finger)29.460.7265
26 Mapoly0025s0126 [KOG4764] Uncharacterized conserved protein; [PF05160] DSS1/SEM1 family; [PTHR16771:SF0] SUBFAMILY NOT NAMED; [PTHR16771] 26 PROTEASOME COMPLEX SUBUNIT DSS129.660.7683
27 Mapoly0026s0047 [PF03226] Yippee zinc-binding/DNA-binding /Mis18, centromere assembly; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG3399] Predicted Yippee-type zinc-binding protein30.170.6365
28 Mapoly0072s0095 [PTHR12419:SF6] SUBFAMILY NOT NAMED; [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PF02338] OTU-like cysteine protease30.400.6893
29 Mapoly0052s0023 [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02736] 20S proteasome subunit beta 7 [EC:3.4.25.1]; [PTHR11599:SF5] PROTEASOME SUBUNIT BETA TYPE 4; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [KOG0185] 20S proteasome, regulatory subunit beta type PSMB4/PRE4; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA30.590.7546
30 Mapoly0060s0102 [PTHR12327:SF0] SUBFAMILY NOT NAMED; [PTHR12327] UNCHARACTERIZED; [GO:0071929] alpha-tubulin acetylation; [GO:0019799] tubulin N-acetyltransferase activity; [KOG4601] Uncharacterized conserved protein; [PF05301] Touch receptor neuron protein Mec-1731.300.6705
31 Mapoly0109s0026 [GO:0005515] protein binding; [KOG1446] Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; [PTHR19861] WD40 REPEAT PROTEIN SWD2; [PF00400] WD domain, G-beta repeat32.120.7119
32 Mapoly0169s0015 [GO:0006355] regulation of transcription, DNA-dependent; [KOG3149] Transcription initiation factor IIF, auxiliary subunit; [PTHR23195] YEATS DOMAIN; [PF03366] YEATS family; [GO:0005634] nucleus; [K11341] YEATS domain-containing protein 432.650.7322
33 Mapoly0053s0105 [K03635] molybdopterin synthase catalytic subunit [EC:2.-.-.-]; [KOG3474] Molybdopterin converting factor, small subunit; [PF02597] ThiS family; [2.-.-.-] Transferases.34.390.6407
34 Mapoly0032s0098 [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT; [1.14.11.2] Procollagen-proline dioxygenase.; [K00472] prolyl 4-hydroxylase [EC:1.14.11.2]; [PF03171] 2OG-Fe(II) oxygenase superfamily35.100.6998
35 Mapoly0004s0033 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR11599:SF16] PROTEASOME SUBUNIT ALPHA TYPE 2; [KOG0181] 20S proteasome, regulatory subunit alpha type PSMA2/PRE8; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [K02726] 20S proteasome subunit alpha 2 [EC:3.4.25.1]; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA35.720.7659
36 Mapoly0015s0174 [KOG4559] Uncharacterized conserved protein; [PF10046] Biogenesis of lysosome-related organelles complex-1 subunit 235.990.7214
37 Mapoly0001s0441 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein38.960.7356
38 Mapoly0011s0105 [PTHR21242] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [GO:0006352] DNA-dependent transcription, initiation; [PTHR21242:SF0] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [K03134] transcription initiation factor TFIID subunit 10; [GO:0005634] nucleus; [PF03540] Transcription initiation factor TFIID 23-30kDa subunit39.200.7292
39 Mapoly0003s0079 -39.570.7375
40 Mapoly0111s0006 -39.800.6698
41 Mapoly0013s0130 [PF11221] Subunit 21 of Mediator complex; [PTHR13381] RNA POLYMERASE II HOLOENZYME COMPONENT SRB7; [KOG1510] RNA polymerase II holoenzyme and mediator subcomplex, subunit SURB7/SRB741.570.7003
42 Mapoly0013s0125 [PF13911] AhpC/TSA antioxidant enzyme; [KOG4498] Uncharacterized conserved protein43.470.7168
43 Mapoly0037s0142 -44.700.6837
44 Mapoly0124s0025 [PF08609] Nucleotide exchange factor Fes1; [KOG2160] Armadillo/beta-catenin-like repeat-containing protein; [PTHR19316] PROTEIN FOLDING REGULATOR; [K14001] nucleotide exchange factor SIL147.010.6404
45 Mapoly0036s0027 [PF03134] TB2/DP1, HVA22 family; [PTHR12300:SF20] HVA22-LIKE PROTEIN; [KOG1726] HVA22/DP1 gene product-related proteins; [PTHR12300] HVA22-LIKE PROTEINS50.400.6563
46 Mapoly0226s0009 [GO:0016020] membrane; [2.4.1.144] Beta-1,4-mannosyl-glycoprotein 4-beta-N-acetylglucosaminyltransferase.; [K00737] beta-1,4-mannosyl-glycoprotein beta-1,4-N-acetylglucosaminyltransferase [EC:2.4.1.144]; [PF04724] Glycosyltransferase family 17; [GO:0003830] beta-1,4-mannosylglycoprotein 4-beta-N-acetylglucosaminyltransferase activity; [GO:0006487] protein N-linked glycosylation; [PTHR12224] BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE; [PTHR12224:SF1] BETA-1,4-MANNOSYL-GLYCOPROTEIN BETA-1,4-N-ACETYLGLUCOSAMINYL-TRANSFERASE50.470.5970
47 Mapoly0022s0048 [KOG2632] Rhomboid family proteins; [PTHR22790] RHOMBOID-RELATED; [GO:0005515] protein binding; [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PF00627] UBA/TS-N domain50.990.6044
48 Mapoly0955s0001 [PF14368] Probable lipid transfer52.540.7190
49 Mapoly0239s0006 [PTHR31570] FAMILY NOT NAMED52.660.7074
50 Mapoly0028s0137 [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PF13640] 2OG-Fe(II) oxygenase superfamily; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT52.920.6384
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