Guide Gene

Gene ID
Mapoly0192s0008
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR12742] RNA-BINDING PROTEIN; [KOG1457] RNA binding protein (contains RRM repeats); [GO:0003676] nucleic acid binding; [PTHR12742:SF0] SUBFAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0192s0008 [PTHR12742] RNA-BINDING PROTEIN; [KOG1457] RNA binding protein (contains RRM repeats); [GO:0003676] nucleic acid binding; [PTHR12742:SF0] SUBFAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00 1.0000
1 Mapoly0109s0062 [PF05018] Protein of unknown function (DUF667); [PTHR12458] ORF PROTEIN; [KOG3213] Transcription factor IIB1.410.7535
2 Mapoly0811s0001 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR12802] SWI/SNF COMPLEX-RELATED2.000.7447
3 Mapoly0053s0024 [GO:0006777] Mo-molybdopterin cofactor biosynthetic process; [PTHR22960] MOLYBDOPTERIN COFACTOR SYNTHESIS PROTEIN A; [PF01967] MoaC family; [K03639] molybdenum cofactor biosynthesis protein5.290.6455
4 Mapoly0016s0029 -7.750.7031
5 Mapoly0094s0058 [PTHR12999] FAMILY NOT NAMED; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others8.120.7440
6 Mapoly0124s0025 [PF08609] Nucleotide exchange factor Fes1; [KOG2160] Armadillo/beta-catenin-like repeat-containing protein; [PTHR19316] PROTEIN FOLDING REGULATOR; [K14001] nucleotide exchange factor SIL110.390.6572
7 Mapoly0001s0198 [GO:0005524] ATP binding; [2.7.12.1] Dual-specificity kinase.; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [K08825] dual-specificity tyrosine-(Y)-phosphorylation regulated kinase [EC:2.7.12.1]; [PTHR24058] DUAL SPECIFICITY PROTEIN KINASE; [KOG0667] Dual-specificity tyrosine-phosphorylation regulated kinase; [GO:0006468] protein phosphorylation; [PTHR24058:SF22] DUAL SPECIFICITY TYROSINE-PHOSPHORYLATION-REGULATED KINASE 211.220.6970
8 Mapoly0103s0016 [K10840] centrin-2; [KOG0028] Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein; [PTHR23050] CALCIUM BINDING PROTEIN; [PF13499] EF-hand domain pair; [PF13833] EF-hand domain pair; [GO:0005509] calcium ion binding14.280.7243
9 Mapoly0040s0053 -14.660.6211
10 Mapoly0043s0021 [KOG0919] C-5 cytosine-specific DNA methylase; [GO:0008168] methyltransferase activity; [PF11926] Domain of unknown function (DUF3444); [PTHR23068:SF2] gb def: Hypothetical protein F8M21_260; [PTHR23068] DNA (CYTOSINE-5-)-METHYLTRANSFERASE 3-RELATED; [PF00145] C-5 cytosine-specific DNA methylase15.170.7113
11 Mapoly0079s0061 [PTHR12736:SF7] SUBFAMILY NOT NAMED; [PF05147] Lanthionine synthetase C-like protein; [KOG2787] Lanthionine synthetase C-like protein 1; [PTHR12736] LANC-LIKE PROTEIN16.120.6528
12 Mapoly0049s0080 [GO:0016790] thiolester hydrolase activity; [PTHR31727] FAMILY NOT NAMED; [GO:0006633] fatty acid biosynthetic process; [PTHR31727:SF0] SUBFAMILY NOT NAMED; [PF01643] Acyl-ACP thioesterase18.110.6225
13 Mapoly0036s0089 -19.340.6784
14 Mapoly0002s0185 [GO:0046836] glycolipid transport; [PF08718] Glycolipid transfer protein (GLTP); [GO:0005737] cytoplasm; [PTHR10219] GLYCOLIPID TRANSFER PROTEIN-RELATED; [GO:0051861] glycolipid binding; [KOG4189] Uncharacterized conserved protein; [GO:0017089] glycolipid transporter activity20.830.6647
15 Mapoly0016s0133 [KOG2681] Metal-dependent phosphohydrolase; [PTHR11373:SF4] PHOSPHOHYDROLASE-RELATED; [PTHR11373] SAM DOMAIN AND HD DOMAIN-CONTAINING PROTEIN-RELATED; [PF01966] HD domain22.490.6499
16 Mapoly0009s0074 [GO:0016020] membrane; [KOG2952] Cell cycle control protein; [PTHR10926] CELL CYCLE CONTROL PROTEIN 50; [PF03381] LEM3 (ligand-effect modulator 3) family / CDC50 family23.470.6442
17 Mapoly0019s0095 [PF13879] KIAA1430 homologue24.490.6032
18 Mapoly0038s0031 [GO:0005874] microtubule; [PF02970] Tubulin binding cofactor A; [GO:0007021] tubulin complex assembly; [PTHR21500] TUBULIN-SPECIFIC CHAPERONE A; [KOG3470] Beta-tubulin folding cofactor A; [PTHR21500:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding26.660.6797
19 Mapoly0004s0273 [KOG1375] Beta tubulin; [PF00091] Tubulin/FtsZ family, GTPase domain; [GO:0005874] microtubule; [K07375] tubulin beta; [PTHR11588] TUBULIN; [GO:0007017] microtubule-based process; [PF03953] Tubulin C-terminal domain; [GO:0006184] GTP catabolic process; [GO:0003924] GTPase activity; [GO:0051258] protein polymerization; [GO:0043234] protein complex; [GO:0005525] GTP binding28.140.6343
20 Mapoly0198s0014 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [PTHR24089:SF39] SUBFAMILY NOT NAMED; [KOG0759] Mitochondrial oxoglutarate/malate carrier proteins28.640.5831
21 Mapoly0046s0119 [PF01545] Cation efflux family; [KOG1484] Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily); [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [K03295] cation efflux system protein, CDF family; [GO:0006812] cation transport; [GO:0008324] cation transmembrane transporter activity; [PTHR11562] CATION EFFLUX PROTEIN/ ZINC TRANSPORTER29.730.6334
22 Mapoly0111s0035 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR12547] CCCH ZINC FINGER/TIS11-RELATED; [GO:0046872] metal ion binding; [KOG1677] CCCH-type Zn-finger protein30.460.6917
23 Mapoly0008s0153 [K04554] ubiquitin-conjugating enzyme E2 J2 [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0894] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme; [PTHR24067:SF42] UBIQUITIN-CONJUGATING ENZYME E2 J231.220.6681
24 Mapoly0101s0019 [GO:0007165] signal transduction; [PF00620] RhoGAP domain; [PTHR23176] RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN32.020.6479
25 Mapoly0095s0015 [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [KOG0907] Thioredoxin; [PTHR18929] PROTEIN DISULFIDE ISOMERASE33.410.5754
26 Mapoly0114s0003 [PTHR13379] UNCHARACTERIZED DUF1308; [PF07000] Protein of unknown function (DUF1308); [KOG4529] Uncharacterized conserved protein33.940.6013
27 Mapoly0001s0515 [PF04844] Transcriptional repressor, ovate34.790.6517
28 Mapoly0020s0146 -35.070.6646
29 Mapoly0008s0187 [PTHR31183] FAMILY NOT NAMED35.200.6519
30 Mapoly0169s0015 [GO:0006355] regulation of transcription, DNA-dependent; [KOG3149] Transcription initiation factor IIF, auxiliary subunit; [PTHR23195] YEATS DOMAIN; [PF03366] YEATS family; [GO:0005634] nucleus; [K11341] YEATS domain-containing protein 436.330.6797
31 Mapoly0020s0002 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0204] Calcium transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [PF00689] Cation transporting ATPase, C-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase37.150.6777
32 Mapoly0013s0014 [PF05641] Agenet domain37.520.6206
33 Mapoly0036s0027 [PF03134] TB2/DP1, HVA22 family; [PTHR12300:SF20] HVA22-LIKE PROTEIN; [KOG1726] HVA22/DP1 gene product-related proteins; [PTHR12300] HVA22-LIKE PROTEINS38.500.6244
34 Mapoly0022s0048 [KOG2632] Rhomboid family proteins; [PTHR22790] RHOMBOID-RELATED; [GO:0005515] protein binding; [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PF00627] UBA/TS-N domain39.120.5815
35 Mapoly0096s0072 -42.990.5427
36 Mapoly0170s0031 -48.150.6302
37 Mapoly0005s0287 [GO:0003723] RNA binding; [PF14608] Zinc finger C-x8-C-x5-C-x3-H type; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR10288:SF5] ZINC FINGER CCCH DOMAIN-CONTAINING PROTEIN; [PTHR10288] KH DOMAIN CONTAINING RNA BINDING PROTEIN; [PF00013] KH domain; [GO:0046872] metal ion binding49.320.6545
38 Mapoly0006s0239 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [PF03141] Putative S-adenosyl-L-methionine-dependent methyltransferase49.800.6378
39 Mapoly0056s0027 [KOG0710] Molecular chaperone (small heat-shock protein Hsp26/Hsp42); [PTHR11527] SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY; [PF00011] Hsp20/alpha crystallin family53.670.6613
40 Mapoly0060s0102 [PTHR12327:SF0] SUBFAMILY NOT NAMED; [PTHR12327] UNCHARACTERIZED; [GO:0071929] alpha-tubulin acetylation; [GO:0019799] tubulin N-acetyltransferase activity; [KOG4601] Uncharacterized conserved protein; [PF05301] Touch receptor neuron protein Mec-1754.990.6071
41 Mapoly0127s0022 [GO:0003950] NAD+ ADP-ribosyltransferase activity; [PTHR21328] POLY (ADP-RIBOSE) POLYMERASE FAMILY, MEMBER (PARP); [PF00644] Poly(ADP-ribose) polymerase catalytic domain57.710.5653
42 MapolyY_B0041 -57.910.6473
43 Mapoly0070s0081 [PF13881] Ubiquitin-2 like Rad60 SUMO-like; [PTHR13169] UBIQUITIN-LIKE PROTEIN 3 (HCG-1 PROTEIN)58.890.5727
44 Mapoly0102s0022 [PF01988] VIT family; [PTHR31812] FAMILY NOT NAMED; [KOG4473] Uncharacterized membrane protein59.030.6611
45 Mapoly0111s0006 -60.150.5987
46 Mapoly0053s0105 [K03635] molybdopterin synthase catalytic subunit [EC:2.-.-.-]; [KOG3474] Molybdopterin converting factor, small subunit; [PF02597] ThiS family; [2.-.-.-] Transferases.60.400.5747
47 Mapoly0955s0001 [PF14368] Probable lipid transfer60.790.6485
48 Mapoly0052s0127 [PF13855] Leucine rich repeat; [PF13516] Leucine Rich repeat; [PF08263] Leucine rich repeat N-terminal domain; [GO:0005515] protein binding; [PTHR24420] LEUCINE-RICH REPEAT RECEPTOR-LIKE PROTEIN KINASE; [KOG0472] Leucine-rich repeat protein60.930.6157
49 Mapoly0143s0006 [PF06521] PAR1 protein60.990.6238
50 Mapoly0108s0047 -64.660.5648
Showing 1 to 50 of 200 records
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