Guide Gene

Gene ID
Mapoly0008s0153
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K04554] ubiquitin-conjugating enzyme E2 J2 [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0894] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme; [PTHR24067:SF42] UBIQUITIN-CONJUGATING ENZYME E2 J2

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0008s0153 [K04554] ubiquitin-conjugating enzyme E2 J2 [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0894] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme; [PTHR24067:SF42] UBIQUITIN-CONJUGATING ENZYME E2 J2 0.00 1.0000
1 Mapoly0191s0007 [2.1.1.77] Protein-L-isoaspartate(D-aspartate) O-methyltransferase.; [GO:0004719] protein-L-isoaspartate (D-aspartate) O-methyltransferase activity; [KOG1661] Protein-L-isoaspartate(D-aspartate) O-methyltransferase; [PF01135] Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); [K00573] protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]; [PTHR11579] PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE; [GO:0006464] cellular protein modification process1.730.7970
2 Mapoly0075s0085 -4.470.7885
3 Mapoly0037s0101 [PTHR31126:SF0] SUBFAMILY NOT NAMED; [PF03162] Tyrosine phosphatase family; [PTHR31126] FAMILY NOT NAMED6.080.8056
4 Mapoly0029s0033 [PF00923] Transaldolase; [PTHR10683] TRANSALDOLASE; [K00616] transaldolase [EC:2.2.1.2]; [GO:0005975] carbohydrate metabolic process; [2.2.1.2] Transaldolase.7.420.7615
5 Mapoly0033s0143 [K03127] transcription initiation factor TFIID subunit 13; [KOG3901] Transcription initiation factor IID subunit; [PF02269] Transcription initiation factor IID, 18kD subunit; [GO:0006366] transcription from RNA polymerase II promoter; [PTHR11380] TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED8.490.7587
6 Mapoly0072s0095 [PTHR12419:SF6] SUBFAMILY NOT NAMED; [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PF02338] OTU-like cysteine protease9.380.7266
7 Mapoly0124s0025 [PF08609] Nucleotide exchange factor Fes1; [KOG2160] Armadillo/beta-catenin-like repeat-containing protein; [PTHR19316] PROTEIN FOLDING REGULATOR; [K14001] nucleotide exchange factor SIL19.700.6918
8 Mapoly0055s0111 -10.250.7360
9 Mapoly0061s0004 [PF14655] Rab3 GTPase-activating protein regulatory subunit N-terminus; [GO:0043087] regulation of GTPase activity; [PTHR12472] RAB3-GAP REGULATORY DOMAIN10.490.6885
10 Mapoly0093s0011 -11.830.7039
11 Mapoly0007s0039 [PTHR12357] YTH (YT521-B HOMOLOGY) DOMAIN-CONTAINING; [PF04146] YT521-B-like domain12.690.7261
12 Mapoly0082s0073 [PTHR15160] VON HIPPEL-LINDAU PROTEIN; [GO:0004518] nuclease activity; [PF02577] Bifunctional nuclease; [PTHR15160:SF1] VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR14.250.7547
13 Mapoly0113s0044 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31966] FAMILY NOT NAMED14.490.7152
14 Mapoly0081s0075 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED14.830.8009
15 Mapoly0013s0130 [PF11221] Subunit 21 of Mediator complex; [PTHR13381] RNA POLYMERASE II HOLOENZYME COMPONENT SRB7; [KOG1510] RNA polymerase II holoenzyme and mediator subcomplex, subunit SURB7/SRB715.870.7266
16 Mapoly0001s0243 -16.250.6617
17 Mapoly0029s0029 [PF00923] Transaldolase; [PTHR10683] TRANSALDOLASE; [GO:0005975] carbohydrate metabolic process16.970.7095
18 Mapoly0027s0107 -18.000.7191
19 Mapoly0051s0111 [PTHR10907] REGUCALCIN; [PF08450] SMP-30/Gluconolaconase/LRE-like region19.750.7460
20 Mapoly0030s0099 [GO:0055114] oxidation-reduction process; [KOG2456] Aldehyde dehydrogenase; [1.2.1.3] Aldehyde dehydrogenase (NAD(+)).; [K00128] aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR11699] ALDEHYDE DEHYDROGENASE-RELATED; [PTHR11699:SF15] ALDEHYDE DEHYDROGENASE; [PF00171] Aldehyde dehydrogenase family19.900.7058
21 Mapoly0001s0109 [PF04725] Photosystem II 10 kDa polypeptide PsbR; [GO:0009523] photosystem II; [GO:0042651] thylakoid membrane; [GO:0009654] oxygen evolving complex; [K03541] photosystem II 10kDa protein; [GO:0015979] photosynthesis20.000.7544
22 Mapoly0037s0074 -20.250.6650
23 Mapoly0038s0031 [GO:0005874] microtubule; [PF02970] Tubulin binding cofactor A; [GO:0007021] tubulin complex assembly; [PTHR21500] TUBULIN-SPECIFIC CHAPERONE A; [KOG3470] Beta-tubulin folding cofactor A; [PTHR21500:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding20.780.7318
24 Mapoly0003s0300 [KOG1515] Arylacetamide deacetylase; [GO:0016787] hydrolase activity; [GO:0008152] metabolic process; [PF07859] alpha/beta hydrolase fold; [PTHR23024] MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES22.450.7484
25 Mapoly0001s0441 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein24.600.7486
26 Mapoly0014s0215 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P450; [PTHR24286] FAMILY NOT NAMED25.040.7296
27 Mapoly0025s0044 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR23042:SF19] SUBFAMILY NOT NAMED; [PTHR23042] CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS26.500.5930
28 Mapoly0035s0029 [PF10602] 26S proteasome subunit RPN7; [KOG0686] COP9 signalosome, subunit CSN1; [GO:0005515] protein binding; [PTHR14145] 26S PROTESOME SUBUNIT 6; [PTHR14145:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 1; [PF01399] PCI domain; [K12175] COP9 signalosome complex subunit 128.640.7270
29 Mapoly0001s0108 -30.200.6857
30 Mapoly0051s0037 [PF07714] Protein tyrosine kinase; [KOG0198] MEKK and related serine/threonine protein kinases; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR22967] SERINE/THREONINE PROTEIN KINASE30.820.6969
31 Mapoly0192s0008 [PTHR12742] RNA-BINDING PROTEIN; [KOG1457] RNA binding protein (contains RRM repeats); [GO:0003676] nucleic acid binding; [PTHR12742:SF0] SUBFAMILY NOT NAMED; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)31.220.6681
32 Mapoly0148s0019 [PTHR14233] DUF914-RELATED; [GO:0016021] integral to membrane; [PTHR14233:SF4] SUBFAMILY NOT NAMED; [GO:0006810] transport; [PF06027] Eukaryotic protein of unknown function (DUF914); [KOG2766] Predicted membrane protein33.620.7507
33 Mapoly0034s0036 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22766:SF29] SUBFAMILY NOT NAMED33.910.7205
34 Mapoly0161s0021 [K11805] WD repeat-containing protein 68; [GO:0005515] protein binding; [KOG0290] Conserved WD40 repeat-containing protein AN11; [PTHR19919] WD REPEAT CONTAINING PROTEIN; [PF00400] WD domain, G-beta repeat34.960.7204
35 Mapoly0140s0025 [GO:0004356] glutamate-ammonia ligase activity; [GO:0006542] glutamine biosynthetic process; [GO:0006807] nitrogen compound metabolic process; [PTHR20852] GLUTAMINE SYNTHETASE; [PF03951] Glutamine synthetase, beta-Grasp domain; [PF00120] Glutamine synthetase, catalytic domain35.500.7296
36 Mapoly0161s0018 [PTHR24067:SF0] UBIQUITIN-CONJUGATING ENZYME E2 H; [KOG0416] Ubiquitin-protein ligase; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [K10576] ubiquitin-conjugating enzyme E2 H [EC:6.3.2.19]; [6.3.2.19] Ubiquitin--protein ligase.; [PF00179] Ubiquitin-conjugating enzyme35.620.6314
37 Mapoly0112s0015 [PTHR12373] ENHANCER OF RUDIMENTARY ERH; [PF01133] Enhancer of rudimentary; [KOG1766] Enhancer of rudimentary; [GO:0007049] cell cycle39.200.7175
38 Mapoly0059s0003 [GO:0016020] membrane; [PTHR19139] AQUAPORIN TRANSPORTER; [GO:0006810] transport; [KOG0223] Aquaporin (major intrinsic protein family); [GO:0005215] transporter activity; [PF00230] Major intrinsic protein40.120.6919
39 Mapoly0033s0019 [PTHR13903] PIRIN-RELATED; [K06911] MFS transporter, UMF1 family; [PF02678] Pirin; [PF05726] Pirin C-terminal cupin domain40.950.6964
40 Mapoly0095s0049 [PTHR13513] E3 UBIQUITIN-PROTEIN LIGASE UBR7; [GO:0008270] zinc ion binding; [PF02207] Putative zinc finger in N-recognin (UBR box); [KOG2752] Uncharacterized conserved protein, contains N-recognin-type Zn-finger; [GO:0004842] ubiquitin-protein ligase activity; [K11979] E3 ubiquitin-protein ligase UBR741.230.7050
41 Mapoly0059s0090 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein41.350.6923
42 Mapoly0001s0456 [KOG3473] RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C; [K03872] transcription elongation factor B, polypeptide 1; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR20648] FAMILY NOT NAMED; [PF03931] Skp1 family, tetramerisation domain41.670.7429
43 Mapoly0127s0029 [PTHR11668] SERINE/THREONINE PROTEIN PHOSPHATASE; [PF00149] Calcineurin-like phosphoesterase; [GO:0016787] hydrolase activity; [KOG0374] Serine/threonine specific protein phosphatase PP1, catalytic subunit; [3.1.3.16] Phosphoprotein phosphatase.; [K06269] protein phosphatase 1, catalytic subunit [EC:3.1.3.16]42.990.6876
44 Mapoly0118s0035 [PF07279] Protein of unknown function (DUF1442); [PTHR31096] FAMILY NOT NAMED43.120.6312
45 Mapoly0105s0029 [PTHR22903] PLEKHH PROTEIN; [PF00169] PH domain44.730.6618
46 Mapoly0065s0048 [PTHR11060:SF0] PROTEIN MEMO1; [K06990] aspartate dehydrogenase [EC:1.4.1.21]; [PF01875] Memo-like protein; [KOG3086] Predicted dioxygenase; [PTHR11060] PROTEIN MEMO145.500.7536
47 Mapoly0046s0119 [PF01545] Cation efflux family; [KOG1484] Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily); [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [K03295] cation efflux system protein, CDF family; [GO:0006812] cation transport; [GO:0008324] cation transmembrane transporter activity; [PTHR11562] CATION EFFLUX PROTEIN/ ZINC TRANSPORTER46.670.6444
48 Mapoly0101s0019 [GO:0007165] signal transduction; [PF00620] RhoGAP domain; [PTHR23176] RHO/RAC/CDC GTPASE-ACTIVATING PROTEIN47.910.6633
49 Mapoly0216s0002 -48.370.6831
50 Mapoly0011s0045 -49.360.6639
Showing 1 to 50 of 200 records
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