Guide Gene

Gene ID
Mapoly0001s0109
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF04725] Photosystem II 10 kDa polypeptide PsbR; [GO:0009523] photosystem II; [GO:0042651] thylakoid membrane; [GO:0009654] oxygen evolving complex; [K03541] photosystem II 10kDa protein; [GO:0015979] photosynthesis

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0109 [PF04725] Photosystem II 10 kDa polypeptide PsbR; [GO:0009523] photosystem II; [GO:0042651] thylakoid membrane; [GO:0009654] oxygen evolving complex; [K03541] photosystem II 10kDa protein; [GO:0015979] photosynthesis 0.00 1.0000
1 Mapoly0082s0073 [PTHR15160] VON HIPPEL-LINDAU PROTEIN; [GO:0004518] nuclease activity; [PF02577] Bifunctional nuclease; [PTHR15160:SF1] VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR1.000.8713
2 Mapoly0058s0007 [GO:0009523] photosystem II; [PTHR31407] FAMILY NOT NAMED; [GO:0019898] extrinsic to membrane; [K02717] photosystem II oxygen-evolving enhancer protein 2; [GO:0009654] oxygen evolving complex; [PF01789] PsbP; [GO:0005509] calcium ion binding; [GO:0015979] photosynthesis1.410.8681
3 Mapoly0007s0109 -2.450.8604
4 Mapoly0101s0004 -2.450.8381
5 Mapoly0012s0169 [PTHR22504] REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1; [PTHR22504:SF0] SUBFAMILY NOT NAMED; [PF09174] Maf1 regulator; [KOG3104] Mod5 protein sorting/negative effector of RNA Pol III synthesis; [GO:0016480] negative regulation of transcription from RNA polymerase III promoter4.120.7900
6 Mapoly0022s0035 [GO:0009072] aromatic amino acid family metabolic process; [PTHR11820:SF1] FUMARYLACETOACETATE HYDROLASE; [PF09298] Fumarylacetoacetase N-terminal; [GO:0004334] fumarylacetoacetase activity; [3.7.1.2] Fumarylacetoacetase.; [PTHR11820] FUMARYLACETOACETATE HYDROLASE; [K01555] fumarylacetoacetase [EC:3.7.1.2]; [KOG2843] Fumarylacetoacetase; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PF01557] Fumarylacetoacetate (FAA) hydrolase family4.240.8108
7 Mapoly0158s0002 [PF03330] Rare lipoprotein A (RlpA)-like double-psi beta-barrel; [PTHR22595] CHITINASE-RELATED4.690.7799
8 Mapoly0037s0101 [PTHR31126:SF0] SUBFAMILY NOT NAMED; [PF03162] Tyrosine phosphatase family; [PTHR31126] FAMILY NOT NAMED5.660.8439
9 Mapoly0011s0098 [PF08855] Domain of unknown function (DUF1825)8.000.7924
10 Mapoly0001s0108 -10.390.7507
11 Mapoly0051s0111 [PTHR10907] REGUCALCIN; [PF08450] SMP-30/Gluconolaconase/LRE-like region11.620.7931
12 Mapoly0034s0036 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22766:SF29] SUBFAMILY NOT NAMED12.490.7965
13 Mapoly0003s0164 [KOG4282] Transcription factor GT-2 and related proteins, contains trihelix DNA-binding/SANT domain; [PF13837] Myb/SANT-like DNA-binding domain14.390.7380
14 Mapoly0081s0075 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED14.660.8398
15 Mapoly0161s0021 [K11805] WD repeat-containing protein 68; [GO:0005515] protein binding; [KOG0290] Conserved WD40 repeat-containing protein AN11; [PTHR19919] WD REPEAT CONTAINING PROTEIN; [PF00400] WD domain, G-beta repeat15.300.7749
16 Mapoly0148s0019 [PTHR14233] DUF914-RELATED; [GO:0016021] integral to membrane; [PTHR14233:SF4] SUBFAMILY NOT NAMED; [GO:0006810] transport; [PF06027] Eukaryotic protein of unknown function (DUF914); [KOG2766] Predicted membrane protein15.810.8048
17 Mapoly0010s0119 [3.2.1.51] Alpha-L-fucosidase.; [PTHR10030] ALPHA-L-FUCOSIDASE; [GO:0004560] alpha-L-fucosidase activity; [K01206] alpha-L-fucosidase [EC:3.2.1.51]; [PF01120] Alpha-L-fucosidase; [GO:0005975] carbohydrate metabolic process; [KOG3340] Alpha-L-fucosidase16.060.7594
18 Mapoly0032s0066 [K01363] cathepsin B [EC:3.4.22.1]; [GO:0008234] cysteine-type peptidase activity; [PTHR12411:SF16] CATHEPSIN B; [PF08127] Peptidase family C1 propeptide; [GO:0050790] regulation of catalytic activity; [PF00112] Papain family cysteine protease; [KOG1543] Cysteine proteinase Cathepsin L; [3.4.22.1] Cathepsin B.; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis; [GO:0004197] cysteine-type endopeptidase activity16.250.7982
19 Mapoly0091s0070 [PF09072] Translation machinery associated TMA716.730.8160
20 Mapoly0128s0013 [4.1.2.5] L-threonine aldolase.; [GO:0016829] lyase activity; [PF01212] Beta-eliminating lyase; [GO:0006520] cellular amino acid metabolic process; [KOG1368] Threonine aldolase; [PTHR10289] THREONINE ALDOLASE; [K01620] threonine aldolase [EC:4.1.2.5]17.610.7708
21 Mapoly0088s0088 [PF02672] CP12 domain17.890.7690
22 Mapoly0030s0130 [PTHR24067:SF26] UBIQUITIN-CONJUGATING ENZYME E2 A, B; [K10573] ubiquitin-conjugating enzyme E2 A [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [KOG0419] Ubiquitin-protein ligase; [6.3.2.19] Ubiquitin--protein ligase.; [PF00179] Ubiquitin-conjugating enzyme18.140.7566
23 Mapoly0034s0023 [KOG3292] Predicted membrane protein; [PF06127] Protein of unknown function (DUF962)19.970.7838
24 Mapoly0008s0153 [K04554] ubiquitin-conjugating enzyme E2 J2 [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0894] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme; [PTHR24067:SF42] UBIQUITIN-CONJUGATING ENZYME E2 J220.000.7544
25 Mapoly0014s0056 [PF07085] DRTGG domain; [PTHR23406] MALIC ENZYME-RELATED; [PF13500] AAA domain; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [PTHR23406:SF3] PHOSPHATE ACETYLTRANSFERASE; [PF01515] Phosphate acetyl/butaryl transferase20.200.7202
26 Mapoly0126s0038 [GO:0009072] aromatic amino acid family metabolic process; [PTHR11959] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [GO:0055114] oxidation-reduction process; [PTHR11959:SF1] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [1.13.11.27] 4-hydroxyphenylpyruvate dioxygenase.; [KOG0638] 4-hydroxyphenylpyruvate dioxygenase; [K00457] 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]; [GO:0016701] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; [GO:0003868] 4-hydroxyphenylpyruvate dioxygenase activity; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily20.490.7722
27 Mapoly0069s0092 [3.2.1.14] Chitinase.; [KOG4742] Predicted chitinase; [GO:0006032] chitin catabolic process; [GO:0008061] chitin binding; [GO:0004568] chitinase activity; [K01183] chitinase [EC:3.2.1.14]; [PTHR22595] CHITINASE-RELATED; [GO:0016998] cell wall macromolecule catabolic process; [PF00182] Chitinase class I; [PF00187] Chitin recognition protein23.450.7485
28 Mapoly0033s0127 [PF01713] Smr domain; [PTHR13308] UNCHARACTERIZED; [PF08590] Domain of unknown function (DUF1771)24.370.7899
29 Mapoly0069s0062 [PTHR24012] FAMILY NOT NAMED; [KOG0107] Alternative splicing factor SRp20/9G8 (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)24.680.8237
30 Mapoly0098s0044 [PF00249] Myb-like DNA-binding domain; [PTHR31499] FAMILY NOT NAMED; [GO:0003682] chromatin binding; [PF14379] MYB-CC type transfactor, LHEQLE motif25.100.7377
31 Mapoly0041s0057 [KOG2366] Alpha-D-galactosidase (melibiase); [K07407] alpha-galactosidase [EC:3.2.1.22]; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [3.2.1.22] Alpha-galactosidase.; [PTHR11452] ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE; [PF02065] Melibiase26.250.7515
32 Mapoly0022s0036 [PF03937] Flavinator of succinate dehydrogenase; [PTHR12469] PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL; [PTHR12469:SF2] gb def: Hypothetical protein 12F11.24026.270.7797
33 Mapoly0068s0017 [GO:0008474] palmitoyl-(protein) hydrolase activity; [PF02089] Palmitoyl protein thioesterase; [K01074] palmitoyl-protein thioesterase [EC:3.1.2.22]; [PTHR11247] PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1; [3.1.2.22] Palmitoyl-protein hydrolase.; [GO:0006464] cellular protein modification process; [KOG2541] Palmitoyl protein thioesterase; [PTHR11247:SF8] PALMITOYL-PROTEIN THIOESTERASE 126.530.7591
34 Mapoly0075s0085 -27.110.7553
35 Mapoly0004s0279 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [K07977] Arf/Sar family, other; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding29.240.7472
36 Mapoly0066s0120 [GO:0016020] membrane; [PTHR32161] FAMILY NOT NAMED; [PF07676] WD40-like Beta Propeller Repeat; [PTHR32161:SF1] SUBFAMILY NOT NAMED; [PF00930] Dipeptidyl peptidase IV (DPP IV) N-terminal region; [GO:0006508] proteolysis30.030.7289
37 Mapoly0001s0307 [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22764] RING FINGER DOMAIN-CONTAINING31.640.7325
38 Mapoly0038s0068 [PTHR14534:SF2] SUBFAMILY NOT NAMED; [PF09783] Vacuolar import and degradation protein; [PTHR14534] FAMILY NOT NAMED35.500.7982
39 Mapoly0189s0021 [PTHR10782] ZINC FINGER MIZ DOMAIN-CONTAINING PROTEIN; [GO:0008270] zinc ion binding; [PF02891] MIZ/SP-RING zinc finger35.550.7306
40 Mapoly0093s0006 [KOG0396] Uncharacterized conserved protein; [PF13445] RING-type zinc-finger; [PF10607] CTLH/CRA C-terminal to LisH motif domain; [PTHR12170] MACROPHAGE ERYTHROBLAST ATTACHER-RELATED; [PTHR12170:SF2] ERYTHROBLAST MACROPHAGE PROTEIN EMP35.940.7339
41 Mapoly0140s0025 [GO:0004356] glutamate-ammonia ligase activity; [GO:0006542] glutamine biosynthetic process; [GO:0006807] nitrogen compound metabolic process; [PTHR20852] GLUTAMINE SYNTHETASE; [PF03951] Glutamine synthetase, beta-Grasp domain; [PF00120] Glutamine synthetase, catalytic domain36.990.7632
42 Mapoly0003s0300 [KOG1515] Arylacetamide deacetylase; [GO:0016787] hydrolase activity; [GO:0008152] metabolic process; [PF07859] alpha/beta hydrolase fold; [PTHR23024] MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES37.230.7599
43 Mapoly0031s0135 [KOG2944] Glyoxalase; [PTHR10374:SF1] LACTOYLGLUTATHIONE LYASE; [PTHR10374] LACTOYLGLUTATHIONE LYASE (GLYOXALASE I); [PF12681] Glyoxalase-like domain37.820.7085
44 Mapoly0007s0238 [PTHR32339] FAMILY NOT NAMED38.960.7678
45 Mapoly0014s0215 [KOG0157] Cytochrome P450 CYP4/CYP19/CYP26 subfamilies; [GO:0005506] iron ion binding; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PF00067] Cytochrome P450; [PTHR24286] FAMILY NOT NAMED38.960.7407
46 Mapoly0012s0029 [PTHR10891:SF372] SUBFAMILY NOT NAMED; [KOG0028] Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein; [PTHR10891] EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding40.150.7521
47 Mapoly0113s0044 [GO:0006950] response to stress; [PF00582] Universal stress protein family; [PTHR31966] FAMILY NOT NAMED40.620.6989
48 Mapoly0134s0027 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN41.270.7083
49 Mapoly0027s0073 [K00166] 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]; [PF00676] Dehydrogenase E1 component; [PTHR11516] PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR); [GO:0008152] metabolic process; [1.2.4.4] 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).; [KOG1182] Branched chain alpha-keto acid dehydrogenase complex, alpha subunit; [PTHR11516:SF1] 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT-RELATED; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor44.190.7230
50 Mapoly0183s0005 -45.990.7021
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