Guide Gene

Gene ID
Mapoly0128s0013
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[4.1.2.5] L-threonine aldolase.; [GO:0016829] lyase activity; [PF01212] Beta-eliminating lyase; [GO:0006520] cellular amino acid metabolic process; [KOG1368] Threonine aldolase; [PTHR10289] THREONINE ALDOLASE; [K01620] threonine aldolase [EC:4.1.2.5]

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0128s0013 [4.1.2.5] L-threonine aldolase.; [GO:0016829] lyase activity; [PF01212] Beta-eliminating lyase; [GO:0006520] cellular amino acid metabolic process; [KOG1368] Threonine aldolase; [PTHR10289] THREONINE ALDOLASE; [K01620] threonine aldolase [EC:4.1.2.5] 0.00 1.0000
1 Mapoly0034s0036 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22766:SF29] SUBFAMILY NOT NAMED2.240.8288
2 Mapoly0088s0088 [PF02672] CP12 domain4.900.7845
3 Mapoly0027s0073 [K00166] 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]; [PF00676] Dehydrogenase E1 component; [PTHR11516] PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR); [GO:0008152] metabolic process; [1.2.4.4] 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).; [KOG1182] Branched chain alpha-keto acid dehydrogenase complex, alpha subunit; [PTHR11516:SF1] 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT-RELATED; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor5.920.7781
4 Mapoly0054s0047 -6.000.7392
5 Mapoly0022s0036 [PF03937] Flavinator of succinate dehydrogenase; [PTHR12469] PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL; [PTHR12469:SF2] gb def: Hypothetical protein 12F11.2406.160.8070
6 Mapoly0011s0098 [PF08855] Domain of unknown function (DUF1825)7.000.7735
7 Mapoly0022s0035 [GO:0009072] aromatic amino acid family metabolic process; [PTHR11820:SF1] FUMARYLACETOACETATE HYDROLASE; [PF09298] Fumarylacetoacetase N-terminal; [GO:0004334] fumarylacetoacetase activity; [3.7.1.2] Fumarylacetoacetase.; [PTHR11820] FUMARYLACETOACETATE HYDROLASE; [K01555] fumarylacetoacetase [EC:3.7.1.2]; [KOG2843] Fumarylacetoacetase; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PF01557] Fumarylacetoacetate (FAA) hydrolase family7.480.7730
8 Mapoly0023s0108 [K01637] isocitrate lyase [EC:4.1.3.1]; [PF00463] Isocitrate lyase family; [GO:0004451] isocitrate lyase activity; [PTHR21631:SF3] ISOCITRATE LYASE; [PTHR21631] ISOCITRATE LYASE/MALATE SYNTHASE; [KOG1260] Isocitrate lyase; [4.1.3.1] Isocitrate lyase.; [GO:0019752] carboxylic acid metabolic process12.000.6470
9 Mapoly0007s0109 -12.170.7795
10 Mapoly0122s0009 [KOG1542] Cysteine proteinase Cathepsin F; [GO:0008234] cysteine-type peptidase activity; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis13.860.7621
11 Mapoly0077s0027 [K07976] Rab family, other; [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0092] GTPase Rab5/YPT51 and related small G protein superfamily GTPases; [PF00071] Ras family; [GO:0005525] GTP binding14.070.7348
12 Mapoly0007s0238 [PTHR32339] FAMILY NOT NAMED15.300.7755
13 Mapoly0082s0073 [PTHR15160] VON HIPPEL-LINDAU PROTEIN; [GO:0004518] nuclease activity; [PF02577] Bifunctional nuclease; [PTHR15160:SF1] VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR15.560.7638
14 Mapoly0099s0017 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [1.5.3.14] Polyamine oxidase (propane-1,3-diamine-forming).; [PTHR10742:SF30] AMINE OXIDASE; [K13366] polyamine oxidase (propane-1,3-diamine-forming) [EC:1.5.3.14]; [KOG0029] Amine oxidase16.280.6991
15 Mapoly0001s0109 [PF04725] Photosystem II 10 kDa polypeptide PsbR; [GO:0009523] photosystem II; [GO:0042651] thylakoid membrane; [GO:0009654] oxygen evolving complex; [K03541] photosystem II 10kDa protein; [GO:0015979] photosynthesis17.610.7708
16 Mapoly0006s0302 [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [PTHR11695:SF30] QUINONE OXIDOREDUCTASE; [GO:0016491] oxidoreductase activity; [KOG1198] Zinc-binding oxidoreductase; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED19.420.7244
17 Mapoly0124s0026 [GO:0006744] ubiquinone biosynthetic process; [KOG3244] Protein involved in ubiquinone biosynthesis; [PTHR12922] UBIQUINONE BIOSYNTHESIS PROTEIN; [PF05019] Coenzyme Q (ubiquinone) biosynthesis protein Coq420.000.7447
18 Mapoly0020s0054 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding20.620.7292
19 Mapoly0122s0010 [GO:0019295] coenzyme M biosynthetic process; [PF02679] (2R)-phospho-3-sulfolactate synthase (ComA); [PTHR10795] PROPROTEIN CONVERTASE SUBTILISIN/KEXIN20.780.7187
20 Mapoly0078s0002 [KOG1417] Homogentisate 1,2-dioxygenase; [GO:0055114] oxidation-reduction process; [PTHR11056:SF0] HOMOGENTISATE 1,2-DIOXYGENASE; [PTHR11056] HOMOGENTISATE 1,2-DIOXYGENASE; [GO:0006559] L-phenylalanine catabolic process; [PF04209] homogentisate 1,2-dioxygenase; [GO:0004411] homogentisate 1,2-dioxygenase activity; [GO:0006570] tyrosine metabolic process24.450.7314
21 Mapoly0013s0108 [PTHR12750] UNCHARACTERIZED; [GO:0003993] acid phosphatase activity; [PF00328] Histidine phosphatase superfamily (branch 2); [KOG1057] Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton24.680.6733
22 Mapoly0045s0094 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992:SF217] HYDROLASE, ALPHA/BETA FOLD FAMILY PROTEIN; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family26.720.7378
23 Mapoly0024s0085 [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PTHR10696] GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; [PF02668] Taurine catabolism dioxygenase TauD, TfdA family26.940.6885
24 Mapoly0044s0117 [PF02431] Chalcone-flavanone isomerase; [GO:0016872] intramolecular lyase activity27.660.7001
25 Mapoly0072s0092 [KOG0172] Lysine-ketoglutarate reductase/saccharopine dehydrogenase; [GO:0055114] oxidation-reduction process; [PF04455] LOR/SDH bifunctional enzyme conserved region; [PF03435] Saccharopine dehydrogenase; [GO:0016491] oxidoreductase activity; [PF01262] Alanine dehydrogenase/PNT, C-terminal domain; [PTHR11133] SACCHAROPINE DEHYDROGENASE; [PF05222] Alanine dehydrogenase/PNT, N-terminal domain27.820.6182
26 Mapoly0037s0101 [PTHR31126:SF0] SUBFAMILY NOT NAMED; [PF03162] Tyrosine phosphatase family; [PTHR31126] FAMILY NOT NAMED28.460.7721
27 Mapoly0118s0006 [PTHR10357] ALPHA-AMYLASE; [PTHR10357:SF74] GLYCOGEN DEBRANCHING ENZYME; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [GO:0003824] catalytic activity; [KOG0470] 1,4-alpha-glucan branching enzyme/starch branching enzyme II; [GO:0043169] cation binding; [3.2.1.-] Glycosidases, i.e.enzymes hydrolyzing O- and S-glycosyl compounds.; [K02438] glycogen operon protein GlgX [EC:3.2.1.-]; [PF02922] Carbohydrate-binding module 48 (Isoamylase N-terminal domain); [PF00128] Alpha amylase, catalytic domain29.660.6769
28 Mapoly0206s0010 [K00025] malate dehydrogenase [EC:1.1.1.37]; [PF00056] lactate/malate dehydrogenase, NAD binding domain; [GO:0055114] oxidation-reduction process; [KOG1496] Malate dehydrogenase; [PTHR23382] MALATE DEHYDROGENASE; [PF02866] lactate/malate dehydrogenase, alpha/beta C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [1.1.1.37] Malate dehydrogenase.; [GO:0006108] malate metabolic process; [GO:0016615] malate dehydrogenase activity30.510.7004
29 Mapoly0037s0074 -32.860.6563
30 Mapoly0029s0033 [PF00923] Transaldolase; [PTHR10683] TRANSALDOLASE; [K00616] transaldolase [EC:2.2.1.2]; [GO:0005975] carbohydrate metabolic process; [2.2.1.2] Transaldolase.32.980.7198
31 Mapoly0004s0143 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain33.470.6486
32 Mapoly0031s0135 [KOG2944] Glyoxalase; [PTHR10374:SF1] LACTOYLGLUTATHIONE LYASE; [PTHR10374] LACTOYLGLUTATHIONE LYASE (GLYOXALASE I); [PF12681] Glyoxalase-like domain34.040.6942
33 Mapoly0061s0138 [GO:0009055] electron carrier activity; [K03521] electron transfer flavoprotein beta subunit; [KOG3180] Electron transfer flavoprotein, beta subunit; [PF01012] Electron transfer flavoprotein domain; [PTHR21294] ELECTRON TRANSFER FLAVOPROTEIN BETA-SUBUNIT34.410.7227
34 Mapoly0058s0086 -35.500.7085
35 Mapoly0004s0239 [PF07063] Domain of unknown function (DUF1338); [PTHR31136] FAMILY NOT NAMED36.280.7018
36 Mapoly0013s0162 [GO:0005515] protein binding; [PF02201] SWIB/MDM2 domain; [PTHR13844] BRG-1 ASSOCIATED FACTOR 60 (BAF60)37.560.7446
37 Mapoly0001s0310 [KOG4621] Uncharacterized conserved protein; [PF09778] Guanylylate cyclase; [PTHR31400] FAMILY NOT NAMED38.160.6708
38 Mapoly0053s0036 [PF00501] AMP-binding enzyme; [KOG1175] Acyl-CoA synthetase; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity38.420.6762
39 Mapoly0126s0038 [GO:0009072] aromatic amino acid family metabolic process; [PTHR11959] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [GO:0055114] oxidation-reduction process; [PTHR11959:SF1] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [1.13.11.27] 4-hydroxyphenylpyruvate dioxygenase.; [KOG0638] 4-hydroxyphenylpyruvate dioxygenase; [K00457] 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]; [GO:0016701] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; [GO:0003868] 4-hydroxyphenylpyruvate dioxygenase activity; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily38.470.7140
40 Mapoly0135s0031 [PTHR13078:SF5] SUBFAMILY NOT NAMED; [PTHR13078] FAMILY NOT NAMED; [PF01575] MaoC like domain; [PF13452] N-terminal half of MaoC dehydratase; [KOG1206] Peroxisomal multifunctional beta-oxidation protein and related enzymes39.500.6633
41 Mapoly0092s0014 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain39.950.7115
42 Mapoly0091s0070 [PF09072] Translation machinery associated TMA740.150.7618
43 Mapoly0081s0076 [KOG4680] Uncharacterized conserved protein, contains ML domain; [PF02221] ML domain; [PTHR11306:SF0] SUBFAMILY NOT NAMED; [PTHR11306] NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED40.250.7265
44 Mapoly0110s0046 [GO:0008375] acetylglucosaminyltransferase activity; [GO:0016020] membrane; [PF02485] Core-2/I-Branching enzyme; [PTHR31042] FAMILY NOT NAMED43.050.6612
45 Mapoly0013s0164 [PF01490] Transmembrane amino acid transporter protein; [PTHR22950] AMINO ACID TRANSPORTER; [KOG1304] Amino acid transporters43.130.6544
46 Mapoly0004s0302 -44.590.6088
47 Mapoly0015s0174 [KOG4559] Uncharacterized conserved protein; [PF10046] Biogenesis of lysosome-related organelles complex-1 subunit 245.430.7083
48 Mapoly0024s0084 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0076] GTP-binding ADP-ribosylation factor-like protein yARL3; [PTHR11711:SF19] ARF-RELATED PROTEIN 1, ARFRP1; [GO:0005525] GTP binding45.440.7188
49 Mapoly0088s0052 -48.060.6970
50 Mapoly0150s0018 [PTHR21236] GOLGI MEMBRANE PROTEIN YIP1; [KOG3103] Rab GTPase interacting factor, Golgi membrane protein; [PTHR21236:SF2] GOLGI MEMBRANE PROTEIN SB140 (YIP1B)48.500.7299
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