Guide Gene

Gene ID
Mapoly0020s0054
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0020s0054 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding 0.00 1.0000
1 Mapoly0034s0036 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22766:SF29] SUBFAMILY NOT NAMED1.000.8604
2 Mapoly0024s0084 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0076] GTP-binding ADP-ribosylation factor-like protein yARL3; [PTHR11711:SF19] ARF-RELATED PROTEIN 1, ARFRP1; [GO:0005525] GTP binding2.450.8408
3 Mapoly0053s0009 [3.2.1.52] Beta-N-acetylhexosaminidase.; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [K12373] hexosaminidase [EC:3.2.1.52]; [PTHR22600:SF8] gb def: Beta-hexosaminidase (EC 3.2.1.52); [PTHR22600] BETA-HEXOSAMINIDASE; [KOG2499] Beta-N-acetylhexosaminidase; [PF00728] Glycosyl hydrolase family 20, catalytic domain; [PF14845] beta-acetyl hexosaminidase like4.900.7533
4 Mapoly0004s0292 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [KOG1237] H+/oligopeptide symporter; [GO:0006810] transport; [GO:0005215] transporter activity5.290.7406
5 Mapoly0027s0129 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain6.160.7264
6 Mapoly0001s0310 [KOG4621] Uncharacterized conserved protein; [PF09778] Guanylylate cyclase; [PTHR31400] FAMILY NOT NAMED6.630.7468
7 Mapoly0002s0101 [KOG1197] Predicted quinone oxidoreductase; [K00344] NADPH2:quinone reductase [EC:1.6.5.5]; [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [1.6.5.5] NADPH:quinone reductase.; [GO:0016491] oxidoreductase activity; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED6.630.7219
8 Mapoly0024s0085 [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [PTHR10696] GAMMA-BUTYROBETAINE HYDROXYLASE-RELATED; [PF02668] Taurine catabolism dioxygenase TauD, TfdA family6.710.7323
9 Mapoly0027s0072 [PF13716] Divergent CRAL/TRIO domain; [KOG2633] Hismacro and SEC14 domain-containing proteins; [PTHR11106] GANGLIOSIDE INDUCED DIFFERENTIATION ASSOCIATED PROTEIN 2-RELATED6.710.7493
10 Mapoly0009s0167 [PF12483] E3 Ubiquitin ligase; [KOG1571] Predicted E3 ubiquitin ligase; [GO:0004842] ubiquitin-protein ligase activity; [GO:0007005] mitochondrion organization; [PF13920] Zinc finger, C3HC4 type (RING finger); [PTHR12183] UNCHARACTERIZED RING ZINC FINGER-CONTAINING PROTEIN6.930.7641
11 Mapoly0088s0088 [PF02672] CP12 domain7.420.7648
12 Mapoly0009s0041 [PF01501] Glycosyl transferase family 8; [KOG1950] Glycosyl transferase, family 8 - glycogenin; [PTHR11183] GLYCOGENIN; [GO:0016757] transferase activity, transferring glycosyl groups7.940.6631
13 Mapoly0007s0109 -9.170.7936
14 Mapoly0006s0302 [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [PTHR11695:SF30] QUINONE OXIDOREDUCTASE; [GO:0016491] oxidoreductase activity; [KOG1198] Zinc-binding oxidoreductase; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED9.540.7438
15 Mapoly0078s0002 [KOG1417] Homogentisate 1,2-dioxygenase; [GO:0055114] oxidation-reduction process; [PTHR11056:SF0] HOMOGENTISATE 1,2-DIOXYGENASE; [PTHR11056] HOMOGENTISATE 1,2-DIOXYGENASE; [GO:0006559] L-phenylalanine catabolic process; [PF04209] homogentisate 1,2-dioxygenase; [GO:0004411] homogentisate 1,2-dioxygenase activity; [GO:0006570] tyrosine metabolic process10.910.7584
16 Mapoly0008s0179 [K00167] 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]; [PTHR11624] DEHYDROGENASE RELATED; [PTHR11624:SF21] BRANCHED CHAIN ALPHA KETO ACID DEHYDROGENASE E1 BETA SUBUNIT; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [1.2.4.4] 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).; [GO:0003824] catalytic activity; [KOG0525] Branched chain alpha-keto acid dehydrogenase E1, beta subunit; [PF02780] Transketolase, C-terminal domain10.950.7491
17 Mapoly0007s0238 [PTHR32339] FAMILY NOT NAMED12.650.7735
18 Mapoly0052s0063 [GO:0016020] membrane; [GO:0003333] amino acid transmembrane transport; [K13868] solute carrier family 7 (L-type amino acid transporter), member 9; [PF13520] Amino acid permease; [PTHR11785] AMINO ACID TRANSPORTER; [KOG1287] Amino acid transporters; [GO:0015171] amino acid transmembrane transporter activity14.730.7051
19 Mapoly0086s0068 [K01464] dihydropyrimidinase [EC:3.5.2.2]; [3.5.2.2] Dihydropyrimidinase.; [PTHR11647:SF1] DIHYDROPYRIMIDINASE; [KOG2584] Dihydroorotase and related enzymes; [PF13147] Amidohydrolase; [PTHR11647] AMINOHYDROLASE16.490.6995
20 Mapoly0038s0008 -16.730.7129
21 Mapoly0013s0164 [PF01490] Transmembrane amino acid transporter protein; [PTHR22950] AMINO ACID TRANSPORTER; [KOG1304] Amino acid transporters16.970.6782
22 Mapoly0051s0037 [PF07714] Protein tyrosine kinase; [KOG0198] MEKK and related serine/threonine protein kinases; [GO:0004672] protein kinase activity; [GO:0006468] protein phosphorylation; [PTHR22967] SERINE/THREONINE PROTEIN KINASE18.710.7198
23 Mapoly0029s0033 [PF00923] Transaldolase; [PTHR10683] TRANSALDOLASE; [K00616] transaldolase [EC:2.2.1.2]; [GO:0005975] carbohydrate metabolic process; [2.2.1.2] Transaldolase.20.400.7315
24 Mapoly0128s0013 [4.1.2.5] L-threonine aldolase.; [GO:0016829] lyase activity; [PF01212] Beta-eliminating lyase; [GO:0006520] cellular amino acid metabolic process; [KOG1368] Threonine aldolase; [PTHR10289] THREONINE ALDOLASE; [K01620] threonine aldolase [EC:4.1.2.5]20.620.7292
25 Mapoly0082s0073 [PTHR15160] VON HIPPEL-LINDAU PROTEIN; [GO:0004518] nuclease activity; [PF02577] Bifunctional nuclease; [PTHR15160:SF1] VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR22.450.7445
26 Mapoly0053s0036 [PF00501] AMP-binding enzyme; [KOG1175] Acyl-CoA synthetase; [GO:0008152] metabolic process; [PTHR24095] FAMILY NOT NAMED; [GO:0003824] catalytic activity23.370.6836
27 Mapoly0036s0043 [GO:0005515] protein binding; [PF00856] SET domain; [PTHR22884] SET DOMAIN PROTEINS24.190.6876
28 Mapoly0122s0046 [PTHR12862] BADF TYPE ATPASE DOMAIN-CONTAINING PROTEIN; [KOG1794] N-Acetylglucosamine kinase; [PF01869] BadF/BadG/BcrA/BcrD ATPase family; [PTHR12862:SF0] SUBFAMILY NOT NAMED24.250.6351
29 Mapoly0012s0169 [PTHR22504] REPRESSOR OF RNA POLYMERASE III TRANSCRIPTION MAF1; [PTHR22504:SF0] SUBFAMILY NOT NAMED; [PF09174] Maf1 regulator; [KOG3104] Mod5 protein sorting/negative effector of RNA Pol III synthesis; [GO:0016480] negative regulation of transcription from RNA polymerase III promoter25.100.7111
30 Mapoly0068s0017 [GO:0008474] palmitoyl-(protein) hydrolase activity; [PF02089] Palmitoyl protein thioesterase; [K01074] palmitoyl-protein thioesterase [EC:3.1.2.22]; [PTHR11247] PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1; [3.1.2.22] Palmitoyl-protein hydrolase.; [GO:0006464] cellular protein modification process; [KOG2541] Palmitoyl protein thioesterase; [PTHR11247:SF8] PALMITOYL-PROTEIN THIOESTERASE 126.150.7280
31 Mapoly0111s0008 [PTHR11254] HECT DOMAIN UBIQUITIN-PROTEIN LIGASE; [KOG0940] Ubiquitin protein ligase RSP5/NEDD4; [6.3.2.19] Ubiquitin--protein ligase.; [K10591] E3 ubiquitin-protein ligase NEDD4 [EC:6.3.2.19]; [GO:0004842] ubiquitin-protein ligase activity; [PF00632] HECT-domain (ubiquitin-transferase)26.150.6659
32 Mapoly0197s0015 -26.530.6409
33 Mapoly0052s0089 [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN; [PF13415] Galactose oxidase, central domain; [KOG4693] Uncharacterized conserved protein, contains kelch repeat27.390.6148
34 Mapoly0124s0026 [GO:0006744] ubiquinone biosynthetic process; [KOG3244] Protein involved in ubiquinone biosynthesis; [PTHR12922] UBIQUINONE BIOSYNTHESIS PROTEIN; [PF05019] Coenzyme Q (ubiquinone) biosynthesis protein Coq427.870.7241
35 Mapoly0011s0154 [PF03226] Yippee zinc-binding/DNA-binding /Mis18, centromere assembly; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG3399] Predicted Yippee-type zinc-binding protein29.150.6737
36 Mapoly0003s0299 [GO:0055114] oxidation-reduction process; [PTHR11695:SF264] ZINC-BINDING ALCOHOL DEHYDROGENASE DOMAIN-CONTAINING PROTEIN 2; [K07119] uncharacterized protein; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase; [KOG4169] 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED30.030.6455
37 Mapoly0122s0009 [KOG1542] Cysteine proteinase Cathepsin F; [GO:0008234] cysteine-type peptidase activity; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis31.370.7199
38 Mapoly0010s0119 [3.2.1.51] Alpha-L-fucosidase.; [PTHR10030] ALPHA-L-FUCOSIDASE; [GO:0004560] alpha-L-fucosidase activity; [K01206] alpha-L-fucosidase [EC:3.2.1.51]; [PF01120] Alpha-L-fucosidase; [GO:0005975] carbohydrate metabolic process; [KOG3340] Alpha-L-fucosidase31.860.6986
39 Mapoly0022s0094 -31.980.7014
40 Mapoly0032s0088 [PF13450] NAD(P)-binding Rossmann-like domain; [GO:0055114] oxidation-reduction process; [PTHR15944] FAMILY NOT NAMED; [GO:0016670] oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor; [1.8.3.5] Prenylcysteine oxidase.; [PF07156] Prenylcysteine lyase; [GO:0030328] prenylcysteine catabolic process; [K05906] prenylcysteine oxidase [EC:1.8.3.5]32.620.6878
41 Mapoly0023s0096 -33.470.6565
42 Mapoly0070s0086 [PF07748] Glycosyl hydrolases family 38 C-terminal domain; [3.2.1.24] Alpha-mannosidase.; [GO:0015923] mannosidase activity; [KOG1959] Glycosyl hydrolase, family 38 - alpha-mannosidase; [PTHR11607] ALPHA-MANNOSIDASE; [GO:0004559] alpha-mannosidase activity; [GO:0006013] mannose metabolic process; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [PF09261] Alpha mannosidase, middle domain; [GO:0005975] carbohydrate metabolic process; [GO:0008270] zinc ion binding; [PF01074] Glycosyl hydrolases family 38 N-terminal domain; [K01191] alpha-mannosidase [EC:3.2.1.24]33.500.6601
43 Mapoly0129s0044 -35.310.6832
44 Mapoly0019s0131 [PTHR23111] ZINC FINGER PROTEIN; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others35.330.5957
45 Mapoly0170s0032 [K07976] Rab family, other; [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0098] GTPase Rab2, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding36.780.6840
46 Mapoly0004s0239 [PF07063] Domain of unknown function (DUF1338); [PTHR31136] FAMILY NOT NAMED37.000.6891
47 Mapoly0153s0034 [GO:0016021] integral to membrane; [PTHR21433] TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA; [KOG4758] Predicted membrane protein; [PF07851] TMPIT-like protein37.520.6809
48 Mapoly0161s0032 [PTHR18895] METHYLTRANSFERASE; [PF06325] Ribosomal protein L11 methyltransferase (PrmA); [GO:0005737] cytoplasm; [GO:0006479] protein methylation; [GO:0008276] protein methyltransferase activity; [PTHR18895:SF3] RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE (L11 MTASE)39.970.6367
49 Mapoly0007s0039 [PTHR12357] YTH (YT521-B HOMOLOGY) DOMAIN-CONTAINING; [PF04146] YT521-B-like domain40.000.6871
50 Mapoly0004s0020 [PTHR13180] SMALL MEMBRANE PROTEIN-RELATED; [KOG3393] Predicted membrane protein; [PF05255] Uncharacterised protein family (UPF0220)40.660.7122
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