Guide Gene

Gene ID
Mapoly0024s0084
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0076] GTP-binding ADP-ribosylation factor-like protein yARL3; [PTHR11711:SF19] ARF-RELATED PROTEIN 1, ARFRP1; [GO:0005525] GTP binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0024s0084 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [KOG0076] GTP-binding ADP-ribosylation factor-like protein yARL3; [PTHR11711:SF19] ARF-RELATED PROTEIN 1, ARFRP1; [GO:0005525] GTP binding 0.00 1.0000
1 Mapoly0185s0018 [PF12171] Zinc-finger double-stranded RNA-binding; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED; [KOG3408] U1-like Zn-finger-containing protein, probabl erole in RNA processing/splicing; [PTHR20863:SF2] ZINC FINGER PROTEIN 593-RELATED1.410.8745
2 Mapoly0124s0026 [GO:0006744] ubiquinone biosynthetic process; [KOG3244] Protein involved in ubiquinone biosynthesis; [PTHR12922] UBIQUINONE BIOSYNTHESIS PROTEIN; [PF05019] Coenzyme Q (ubiquinone) biosynthesis protein Coq42.000.8338
3 Mapoly0020s0054 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding2.450.8408
4 Mapoly0007s0238 [PTHR32339] FAMILY NOT NAMED3.160.8538
5 Mapoly0170s0032 [K07976] Rab family, other; [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0098] GTPase Rab2, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding4.000.7751
6 Mapoly0006s0302 [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [PTHR11695:SF30] QUINONE OXIDOREDUCTASE; [GO:0016491] oxidoreductase activity; [KOG1198] Zinc-binding oxidoreductase; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED6.000.7717
7 Mapoly0128s0004 -6.630.7822
8 Mapoly0035s0067 [GO:0050660] flavin adenine dinucleotide binding; [GO:0055114] oxidation-reduction process; [PTHR11082:SF4] TRNA-DIHYDROURIDINE SYNTHASE 2; [PF01207] Dihydrouridine synthase (Dus); [KOG2335] tRNA-dihydrouridine synthase; [GO:0008033] tRNA processing; [PTHR11082] TRNA-DIHYDROURIDINE SYNTHASE; [GO:0017150] tRNA dihydrouridine synthase activity; [K05543] tRNA-dihydrouridine synthase 2 [EC:1.-.-.-]; [1.-.-.-] Oxidoreductases.8.060.8200
9 Mapoly0015s0018 [PTHR12378] UNCHARACTERIZED; [KOG0324] Uncharacterized conserved protein; [PF05903] PPPDE putative peptidase domain; [PTHR12378:SF9] gb def: Hypothetical protein OSJNBb0094K03.58.600.7393
10 Mapoly0088s0088 [PF02672] CP12 domain9.490.7842
11 Mapoly0068s0017 [GO:0008474] palmitoyl-(protein) hydrolase activity; [PF02089] Palmitoyl protein thioesterase; [K01074] palmitoyl-protein thioesterase [EC:3.1.2.22]; [PTHR11247] PALMITOYL-PROTEIN THIOESTERASE/DOLICHYLDIPHOSPHATASE 1; [3.1.2.22] Palmitoyl-protein hydrolase.; [GO:0006464] cellular protein modification process; [KOG2541] Palmitoyl protein thioesterase; [PTHR11247:SF8] PALMITOYL-PROTEIN THIOESTERASE 19.540.7810
12 Mapoly0022s0086 [GO:0008168] methyltransferase activity; [PTHR10108] METHYLTRANSFERASE; [2.1.1.41] Sterol 24-C-methyltransferase.; [K00559] sterol 24-C-methyltransferase [EC:2.1.1.41]; [PF08241] Methyltransferase domain; [KOG1269] SAM-dependent methyltransferases; [GO:0006694] steroid biosynthetic process; [GO:0008152] metabolic process; [PF08498] Sterol methyltransferase C-terminal10.100.7413
13 Mapoly0034s0036 [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22766:SF29] SUBFAMILY NOT NAMED11.220.7933
14 Mapoly0002s0208 [PF05207] CSL zinc finger; [KOG2923] Uncharacterized conserved protein; [PTHR21454] FAMILY NOT NAMED12.850.7755
15 Mapoly0011s0098 [PF08855] Domain of unknown function (DUF1825)13.780.7673
16 Mapoly0007s0109 -14.140.7984
17 Mapoly0091s0055 [K13989] Derlin-2/3; [PF04511] Der1-like family; [KOG0858] Predicted membrane protein; [PTHR11009] DER1-LIKE PROTEIN, DERLIN15.680.7345
18 Mapoly0108s0049 [PF01585] G-patch domain; [GO:0003676] nucleic acid binding15.870.7502
19 Mapoly0095s0003 [PTHR15071] CATION-DEPENDENT MANNOSE-6-PHOSPHATE RECEPTOR; [PF09451] Autophagy-related protein 2716.700.7458
20 Mapoly0053s0061 -16.910.7573
21 Mapoly0058s0042 [PF00327] Ribosomal protein L30p/L7e; [K02907] large subunit ribosomal protein L30; [PTHR15892] MITOCHONDRIAL RIBOSOMAL PROTEIN L3017.830.8058
22 Mapoly0005s0007 [KOG0090] Signal recognition particle receptor, beta subunit (small G protein superfamily); [PF09439] Signal recognition particle receptor beta subunit; [PTHR19326] SIGNAL RECOGNITION PARTICLE RECEPTOR BETA SUBUNIT RELATED; [K12272] signal recognition particle receptor subunit beta19.130.7175
23 Mapoly0001s0438 [PTHR10344] THYMIDYLATE KINASE; [2.7.4.9] dTMP kinase.; [K00943] dTMP kinase [EC:2.7.4.9]; [KOG3327] Thymidylate kinase/adenylate kinase; [PF02223] Thymidylate kinase21.910.7258
24 Mapoly0005s0036 [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [KOG1198] Zinc-binding oxidoreductase; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED21.910.7360
25 Mapoly0081s0076 [KOG4680] Uncharacterized conserved protein, contains ML domain; [PF02221] ML domain; [PTHR11306:SF0] SUBFAMILY NOT NAMED; [PTHR11306] NIEMANN PICK TYPE C2 PROTEIN NPC2-RELATED24.680.7624
26 Mapoly0013s0162 [GO:0005515] protein binding; [PF02201] SWIB/MDM2 domain; [PTHR13844] BRG-1 ASSOCIATED FACTOR 60 (BAF60)25.750.7731
27 Mapoly0058s0037 [PTHR12626:SF1] PDCD4-RELATED; [PTHR12626] PROGRAMMED CELL DEATH 426.720.7341
28 Mapoly0153s0034 [GO:0016021] integral to membrane; [PTHR21433] TRANSMEMBRANE PROTEIN INDUCED BY TUMOR NECROSIS FACTOR ALPHA; [KOG4758] Predicted membrane protein; [PF07851] TMPIT-like protein28.840.7153
29 Mapoly0033s0159 [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PTHR23091] N-TERMINAL ACETYLTRANSFERASE28.980.7538
30 Mapoly0047s0078 -28.980.7180
31 Mapoly0037s0101 [PTHR31126:SF0] SUBFAMILY NOT NAMED; [PF03162] Tyrosine phosphatase family; [PTHR31126] FAMILY NOT NAMED29.390.7813
32 Mapoly0004s0020 [PTHR13180] SMALL MEMBRANE PROTEIN-RELATED; [KOG3393] Predicted membrane protein; [PF05255] Uncharacterised protein family (UPF0220)30.460.7491
33 Mapoly0197s0015 -31.080.6432
34 Mapoly0029s0033 [PF00923] Transaldolase; [PTHR10683] TRANSALDOLASE; [K00616] transaldolase [EC:2.2.1.2]; [GO:0005975] carbohydrate metabolic process; [2.2.1.2] Transaldolase.31.110.7339
35 Mapoly0082s0073 [PTHR15160] VON HIPPEL-LINDAU PROTEIN; [GO:0004518] nuclease activity; [PF02577] Bifunctional nuclease; [PTHR15160:SF1] VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR31.180.7506
36 Mapoly0008s0179 [K00167] 2-oxoisovalerate dehydrogenase E1 component, beta subunit [EC:1.2.4.4]; [PTHR11624] DEHYDROGENASE RELATED; [PTHR11624:SF21] BRANCHED CHAIN ALPHA KETO ACID DEHYDROGENASE E1 BETA SUBUNIT; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [1.2.4.4] 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).; [GO:0003824] catalytic activity; [KOG0525] Branched chain alpha-keto acid dehydrogenase E1, beta subunit; [PF02780] Transketolase, C-terminal domain31.420.7260
37 Mapoly0059s0023 [PTHR23365] POLY-A BINDING PROTEIN 2; [KOG4208] Nucleolar RNA-binding protein NIFK; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)32.400.7992
38 Mapoly0050s0076 -32.980.7434
39 Mapoly0086s0068 [K01464] dihydropyrimidinase [EC:3.5.2.2]; [3.5.2.2] Dihydropyrimidinase.; [PTHR11647:SF1] DIHYDROPYRIMIDINASE; [KOG2584] Dihydroorotase and related enzymes; [PF13147] Amidohydrolase; [PTHR11647] AMINOHYDROLASE33.050.6906
40 Mapoly0043s0113 [KOG4771] Nucleolar protein (NOP16) involved in 60S ribosomal subunit biogenesis; [PTHR13243] HSPC111 PROTEIN-RELATED; [PF09420] Ribosome biogenesis protein Nop1635.240.7572
41 Mapoly0002s0003 -36.990.7078
42 Mapoly0078s0002 [KOG1417] Homogentisate 1,2-dioxygenase; [GO:0055114] oxidation-reduction process; [PTHR11056:SF0] HOMOGENTISATE 1,2-DIOXYGENASE; [PTHR11056] HOMOGENTISATE 1,2-DIOXYGENASE; [GO:0006559] L-phenylalanine catabolic process; [PF04209] homogentisate 1,2-dioxygenase; [GO:0004411] homogentisate 1,2-dioxygenase activity; [GO:0006570] tyrosine metabolic process37.760.7262
43 Mapoly0117s0008 [GO:0016758] transferase activity, transferring hexosyl groups; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase38.460.6944
44 Mapoly0049s0103 -39.420.6715
45 Mapoly0126s0038 [GO:0009072] aromatic amino acid family metabolic process; [PTHR11959] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [GO:0055114] oxidation-reduction process; [PTHR11959:SF1] 4-HYDROXYPHENYLPYRUVATE DIOXYGENASE; [1.13.11.27] 4-hydroxyphenylpyruvate dioxygenase.; [KOG0638] 4-hydroxyphenylpyruvate dioxygenase; [K00457] 4-hydroxyphenylpyruvate dioxygenase [EC:1.13.11.27]; [GO:0016701] oxidoreductase activity, acting on single donors with incorporation of molecular oxygen; [GO:0003868] 4-hydroxyphenylpyruvate dioxygenase activity; [PF00903] Glyoxalase/Bleomycin resistance protein/Dioxygenase superfamily42.040.7212
46 Mapoly0001s0287 [KOG0645] WD40 repeat protein; [PTHR19920:SF0] SUBFAMILY NOT NAMED; [GO:0005515] protein binding; [PTHR19920] WD40 PROTEIN CIAO1; [PF00400] WD domain, G-beta repeat43.160.6989
47 Mapoly0001s0271 [PTHR21146] MEF2B PROTEIN; [KOG4523] Uncharacterized conserved protein; [PTHR21146:SF0] SUBFAMILY NOT NAMED; [PF10167] Uncharacterised conserved protein43.990.7276
48 Mapoly0002s0103 [PTHR12791] GOLGI SNARE BET1-RELATED; [GO:0005515] protein binding; [PTHR12791:SF5] BET1-LIKE SNARE 1; [KOG3385] V-SNARE; [K08504] blocked early in transport 1; [PF05739] SNARE domain45.030.7511
49 Mapoly0090s0083 [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PTHR23149] G PATCH DOMAIN CONTAINING PROTEIN45.090.6760
50 Mapoly0128s0013 [4.1.2.5] L-threonine aldolase.; [GO:0016829] lyase activity; [PF01212] Beta-eliminating lyase; [GO:0006520] cellular amino acid metabolic process; [KOG1368] Threonine aldolase; [PTHR10289] THREONINE ALDOLASE; [K01620] threonine aldolase [EC:4.1.2.5]45.440.7188
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