Guide Gene

Gene ID
Mapoly0004s0143
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0004s0143 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain 0.00 1.0000
1 Mapoly0099s0017 [PTHR10742] AMINE OXIDASE; [PF01593] Flavin containing amine oxidoreductase; [GO:0055114] oxidation-reduction process; [GO:0016491] oxidoreductase activity; [1.5.3.14] Polyamine oxidase (propane-1,3-diamine-forming).; [PTHR10742:SF30] AMINE OXIDASE; [K13366] polyamine oxidase (propane-1,3-diamine-forming) [EC:1.5.3.14]; [KOG0029] Amine oxidase6.000.6857
2 Mapoly0148s0017 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [K06892] ATP-dependent Clp protease adaptor protein ClpS; [PF03171] 2OG-Fe(II) oxygenase superfamily9.800.6945
3 Mapoly0043s0038 [GO:0005783] endoplasmic reticulum; [KOG3491] Predicted membrane protein; [PF06624] Ribosome associated membrane protein RAMP4; [PTHR15601:SF0] SUBFAMILY NOT NAMED; [PTHR15601] STRESS ASSOCIATED ENDOPLASMIC RETICULUM PROTEIN (SERP1/RAMP4)10.630.7365
4 Mapoly0176s0004 [PTHR31245] FAMILY NOT NAMED11.140.6125
5 Mapoly0014s0007 [PF12695] Alpha/beta hydrolase family17.440.6259
6 Mapoly0044s0127 [KOG4172] Predicted E3 ubiquitin ligase; [PTHR23041] RING FINGER DOMAIN-CONTAINING; [PF13923] Zinc finger, C3HC4 type (RING finger)19.600.5730
7 Mapoly0001s0551 [PF03470] XS zinc finger domain; [PTHR21596] RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED; [PF03469] XH domain; [PF03468] XS domain; [GO:0031047] gene silencing by RNA; [PTHR21596:SF3] TRANSCRIPTION FACTOR X1-LIKE21.170.6786
8 Mapoly0015s0102 [PF05996] Ferredoxin-dependent bilin reductase; [GO:0055114] oxidation-reduction process; [1.3.7.4] Phytochromobilin:ferredoxin oxidoreductase.; [K08101] phytochromobilin:ferredoxin oxidoreductase [EC:1.3.7.4]; [GO:0010024] phytochromobilin biosynthetic process; [GO:0050897] cobalt ion binding; [GO:0016636] oxidoreductase activity, acting on the CH-CH group of donors, iron-sulfur protein as acceptor21.910.5896
9 Mapoly0674s0001 [PTHR21576] UNCHARACTERIZED NODULIN-LIKE PROTEIN; [PF06813] Nodulin-like24.080.6252
10 Mapoly0044s0133 -25.460.5790
11 Mapoly0025s0057 [PTHR10907] REGUCALCIN; [PF08450] SMP-30/Gluconolaconase/LRE-like region; [KOG4499] Ca2+-binding protein Regucalcin/SMP3026.270.6679
12 Mapoly0052s0101 -29.090.6470
13 Mapoly0043s0052 [PF12937] F-box-like; [K14495] F-box protein GID2; [GO:0005515] protein binding32.310.6078
14 Mapoly0101s0020 [KOG1322] GDP-mannose pyrophosphorylase/mannose-1-phosphate guanylyltransferase; [PF00483] Nucleotidyl transferase; [GO:0009058] biosynthetic process; [PTHR22572] SUGAR-1-PHOSPHATE GUANYL TRANSFERASE; [GO:0016779] nucleotidyltransferase activity; [2.7.7.27] Glucose-1-phosphate adenylyltransferase.; [K00975] glucose-1-phosphate adenylyltransferase [EC:2.7.7.27]33.360.6497
15 Mapoly0128s0013 [4.1.2.5] L-threonine aldolase.; [GO:0016829] lyase activity; [PF01212] Beta-eliminating lyase; [GO:0006520] cellular amino acid metabolic process; [KOG1368] Threonine aldolase; [PTHR10289] THREONINE ALDOLASE; [K01620] threonine aldolase [EC:4.1.2.5]33.470.6486
16 Mapoly0046s0105 [GO:0005097] Rab GTPase activator activity; [KOG2197] Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain38.990.6431
17 Mapoly0046s0064 [PF01702] Queuine tRNA-ribosyltransferase; [2.4.2.29] tRNA-guanine(34) transglycosylase.; [GO:0008479] queuine tRNA-ribosyltransferase activity; [PTHR11962] QUEUINE TRNA-RIBOSYLTRANSFERASE; [GO:0008616] queuosine biosynthetic process; [K00773] queuine tRNA-ribosyltransferase [EC:2.4.2.29]; [GO:0006400] tRNA modification; [KOG3909] Queuine-tRNA ribosyltransferase44.620.6422
18 Mapoly0004s0188 [GO:0005840] ribosome; [K02991] small subunit ribosomal protein S6e; [PTHR11502] 40S RIBOSOMAL PROTEIN S6; [KOG1646] 40S ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01092] Ribosomal protein S6e; [GO:0006412] translation46.480.6675
19 Mapoly0027s0073 [K00166] 2-oxoisovalerate dehydrogenase E1 component, alpha subunit [EC:1.2.4.4]; [PF00676] Dehydrogenase E1 component; [PTHR11516] PYRUVATE DEHYDROGENASE E1 COMPONENT, ALPHA SUBUNIT (BACTERIAL AND ORGANELLAR); [GO:0008152] metabolic process; [1.2.4.4] 3-methyl-2-oxobutanoate dehydrogenase (2-methylpropanoyl-transferring).; [KOG1182] Branched chain alpha-keto acid dehydrogenase complex, alpha subunit; [PTHR11516:SF1] 2-OXOISOVALERATE DEHYDROGENASE ALPHA SUBUNIT-RELATED; [GO:0016624] oxidoreductase activity, acting on the aldehyde or oxo group of donors, disulfide as acceptor53.670.6206
20 Mapoly0004s0241 -54.260.6333
21 Mapoly0086s0056 [1.1.1.200] Aldose-6-phosphate reductase (NADPH).; [KOG1577] Aldo/keto reductase family proteins; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family; [K00085] aldose-6-phosphate reductase (NADPH2) [EC:1.1.1.200]58.690.6360
22 Mapoly0009s0026 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PTHR24223] FAMILY NOT NAMED; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [KOG0054] Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PF00005] ABC transporter61.200.5672
23 Mapoly0041s0063 -62.050.6151
24 Mapoly0042s0036 [KOG3272] Predicted coiled-coil protein; [PTHR13049] DUF814-RELATED; [PF05670] Domain of unknown function (DUF814)62.260.6053
25 Mapoly0007s0174 [KOG1591] Prolyl 4-hydroxylase alpha subunit; [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PF13640] 2OG-Fe(II) oxygenase superfamily; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT; [1.14.11.2] Procollagen-proline dioxygenase.; [K00472] prolyl 4-hydroxylase [EC:1.14.11.2]64.250.5611
26 Mapoly0166s0006 [PF06093] Spt4/RpoE2 zinc finger; [KOG3490] Transcription elongation factor SPT4; [PTHR12882:SF0] SUBFAMILY NOT NAMED; [PTHR12882] SUPPRESSOR OF TY 468.080.6341
27 Mapoly0085s0034 -69.500.5349
28 Mapoly0022s0036 [PF03937] Flavinator of succinate dehydrogenase; [PTHR12469] PROTEIN EMI5 HOMOLOG, MITOCHONDRIAL; [PTHR12469:SF2] gb def: Hypothetical protein 12F11.24072.560.6350
29 Mapoly0051s0087 [GO:0016020] membrane; [GO:0006486] protein glycosylation; [KOG2288] Galactosyltransferases; [GO:0008378] galactosyltransferase activity; [PF01762] Galactosyltransferase; [PTHR11214] BETA-1,3-N-ACETYLGLUCOSAMINYLTRANSFERASE78.040.6132
30 Mapoly0095s0049 [PTHR13513] E3 UBIQUITIN-PROTEIN LIGASE UBR7; [GO:0008270] zinc ion binding; [PF02207] Putative zinc finger in N-recognin (UBR box); [KOG2752] Uncharacterized conserved protein, contains N-recognin-type Zn-finger; [GO:0004842] ubiquitin-protein ligase activity; [K11979] E3 ubiquitin-protein ligase UBR778.490.6137
31 Mapoly0127s0049 [K04649] ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:6.3.2.19]; [GO:0005515] protein binding; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0418] Ubiquitin-protein ligase; [PF00627] UBA/TS-N domain; [PTHR24067:SF29] UBIQUITIN-CONJUGATING ENZYME E2 K; [PF00179] Ubiquitin-conjugating enzyme79.370.6100
32 Mapoly0069s0062 [PTHR24012] FAMILY NOT NAMED; [KOG0107] Alternative splicing factor SRp20/9G8 (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)80.420.6341
33 Mapoly0094s0054 [PTHR13923] SEC31-RELATED PROTEIN80.780.6030
34 Mapoly0054s0045 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [K02932] large subunit ribosomal protein L5e; [PTHR23410] RIBOSOMAL PROTEIN L5-RELATED; [GO:0005622] intracellular; [GO:0008097] 5S rRNA binding; [KOG0875] 60S ribosomal protein L5; [PF14204] Ribosomal L18 C-terminal region; [GO:0006412] translation84.170.6232
35 Mapoly0076s0059 -85.040.6125
36 Mapoly0008s0272 [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0863] 20S proteasome, regulatory subunit alpha type PSMA1/PRE5; [PTHR11599:SF10] PROTEASOME SUBUNIT ALPHA TYPE 3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA85.240.6235
37 Mapoly0061s0032 [GO:0016020] membrane; [PF07933] Protein of unknown function (DUF1681); [PTHR12847:SF4] SUBFAMILY NOT NAMED; [KOG2500] Uncharacterized conserved protein; [GO:0006897] endocytosis; [PTHR12847] ATP-BINDING CASSETTE (ABC) TRANSPORTER-RELATED87.870.6139
38 Mapoly0080s0088 -88.760.5687
39 Mapoly0123s0020 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 189.600.4746
40 Mapoly0080s0018 -89.870.6042
41 Mapoly0019s0126 [PTHR10994] RETICULON; [PF03407] Nucleotide-diphospho-sugar transferase90.340.5542
42 Mapoly0019s0096 [PTHR31506] FAMILY NOT NAMED; [PF05687] Plant protein of unknown function (DUF822)92.030.5251
43 Mapoly0216s0002 -92.170.5997
44 Mapoly0060s0109 [GO:0005840] ribosome; [K02993] small subunit ribosomal protein S7e; [KOG3320] 40S ribosomal protein S7; [GO:0003735] structural constituent of ribosome; [PF01251] Ribosomal protein S7e; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR11278:SF0] SUBFAMILY NOT NAMED; [PTHR11278] 40S RIBOSOMAL PROTEIN S793.910.6259
45 Mapoly0124s0021 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR31945] FAMILY NOT NAMED96.340.5990
46 Mapoly0019s0098 [PF13345] Domain of unknown function (DUF4098)96.750.5985
47 Mapoly0031s0135 [KOG2944] Glyoxalase; [PTHR10374:SF1] LACTOYLGLUTATHIONE LYASE; [PTHR10374] LACTOYLGLUTATHIONE LYASE (GLYOXALASE I); [PF12681] Glyoxalase-like domain98.780.5790
48 Mapoly0036s0057 [KOG2913] Predicted membrane protein; [PTHR16201] FAMILY NOT NAMED; [PF04193] PQ loop repeat99.580.5597
49 Mapoly0040s0013 [PTHR12226:SF2] SUBFAMILY NOT NAMED; [K09660] mannose-P-dolichol utilization defect 1; [PTHR12226] MANNOSE-P-DOLICHOL UTILIZATION DEFECT 1 (LEC35)-RELATED; [KOG3211] Predicted endoplasmic reticulum membrane protein Lec35/MPDU1 involved in monosaccharide-P-dolichol utilization; [PF04193] PQ loop repeat103.740.6327
50 Mapoly0001s0112 [GO:0005840] ribosome; [K02882] large subunit ribosomal protein L18Ae; [KOG0829] 60S ribosomal protein L18A; [PTHR10052] 60S RIBOSOMAL PROTEIN L18A; [PF01775] Ribosomal L18ae/LX protein domain; [GO:0006412] translation; [GO:0003735] structural constituent of ribosome105.830.6225
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