Guide Gene

Gene ID
Mapoly0001s0551
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF03470] XS zinc finger domain; [PTHR21596] RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED; [PF03469] XH domain; [PF03468] XS domain; [GO:0031047] gene silencing by RNA; [PTHR21596:SF3] TRANSCRIPTION FACTOR X1-LIKE

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0001s0551 [PF03470] XS zinc finger domain; [PTHR21596] RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED; [PF03469] XH domain; [PF03468] XS domain; [GO:0031047] gene silencing by RNA; [PTHR21596:SF3] TRANSCRIPTION FACTOR X1-LIKE 0.00 1.0000
1 Mapoly0092s0014 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain2.450.7964
2 Mapoly0154s0015 [PF00645] Poly(ADP-ribose) polymerase and DNA-Ligase Zn-finger region; [GO:0003677] DNA binding; [PTHR15447] POLY [ADP-RIBOSE] POLYMERASE; [GO:0003950] NAD+ ADP-ribosyltransferase activity; [PF05406] WGR domain; [GO:0008270] zinc ion binding; [PF00533] BRCA1 C Terminus (BRCT) domain; [GO:0006471] protein ADP-ribosylation; [PF08063] PADR1 (NUC008) domain; [K10798] poly [ADP-ribose] polymerase [EC:2.4.2.30]; [GO:0005634] nucleus; [PF02877] Poly(ADP-ribose) polymerase, regulatory domain; [2.4.2.30] NAD(+) ADP-ribosyltransferase.; [KOG1037] NAD+ ADP-ribosyltransferase Parp, required for poly-ADP ribosylation of nuclear proteins; [PF00644] Poly(ADP-ribose) polymerase catalytic domain2.830.7932
3 Mapoly0191s0009 [PTHR23123] PHD/F-BOX CONTAINING PROTEIN; [1.14.11.27] [Histone H3]-lysine-36 demethylase.; [PF13621] Cupin-like domain; [K10276] F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]3.160.8055
4 Mapoly0046s0064 [PF01702] Queuine tRNA-ribosyltransferase; [2.4.2.29] tRNA-guanine(34) transglycosylase.; [GO:0008479] queuine tRNA-ribosyltransferase activity; [PTHR11962] QUEUINE TRNA-RIBOSYLTRANSFERASE; [GO:0008616] queuosine biosynthetic process; [K00773] queuine tRNA-ribosyltransferase [EC:2.4.2.29]; [GO:0006400] tRNA modification; [KOG3909] Queuine-tRNA ribosyltransferase4.580.7813
5 Mapoly0046s0105 [GO:0005097] Rab GTPase activator activity; [KOG2197] Ypt/Rab-specific GTPase-activating protein GYP7 and related proteins; [PTHR22957] TBC1 DOMAIN FAMILY MEMBER GTPASE-ACTIVATING PROTEIN; [GO:0032313] regulation of Rab GTPase activity; [PF00566] Rab-GTPase-TBC domain5.000.7904
6 Mapoly0068s0006 -5.570.7324
7 Mapoly0048s0015 [K00721] dolichol-phosphate mannosyltransferase [EC:2.4.1.83]; [PTHR10859] GLYCOSYL TRANSFERASE; [2.4.1.83] Dolichyl-phosphate beta-D-mannosyltransferase.; [KOG2978] Dolichol-phosphate mannosyltransferase; [PF00535] Glycosyl transferase family 25.660.8060
8 Mapoly0095s0049 [PTHR13513] E3 UBIQUITIN-PROTEIN LIGASE UBR7; [GO:0008270] zinc ion binding; [PF02207] Putative zinc finger in N-recognin (UBR box); [KOG2752] Uncharacterized conserved protein, contains N-recognin-type Zn-finger; [GO:0004842] ubiquitin-protein ligase activity; [K11979] E3 ubiquitin-protein ligase UBR79.540.7611
9 Mapoly0167s0006 -11.220.7888
10 Mapoly0083s0051 [PF12576] Protein of unknown function (DUF3754)12.170.6995
11 Mapoly0114s0002 [PF03168] Late embryogenesis abundant protein; [PTHR31852] FAMILY NOT NAMED13.420.7798
12 Mapoly0111s0035 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR12547] CCCH ZINC FINGER/TIS11-RELATED; [GO:0046872] metal ion binding; [KOG1677] CCCH-type Zn-finger protein13.560.7799
13 Mapoly0141s0033 [PF04969] CS domain; [KOG1309] Suppressor of G2 allele of skp1; [K12795] suppressor of G2 allele of SKP1; [GO:0005515] protein binding; [PF13414] TPR repeat; [PF05002] SGS domain; [PTHR22904:SF10] SUPPRESSOR OF G2 ALLELE OF SKP1 (SGT1); [PF00515] Tetratricopeptide repeat; [PTHR22904] TPR REPEAT CONTAINING PROTEIN15.680.6931
14 Mapoly0075s0037 [K03257] translation initiation factor eIF-4A; [GO:0005524] ATP binding; [KOG0328] Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding15.720.7461
15 Mapoly0004s0095 [KOG1303] Amino acid transporters; [PF01490] Transmembrane amino acid transporter protein; [PTHR22950] AMINO ACID TRANSPORTER16.490.7295
16 Mapoly0025s0110 -18.760.7408
17 Mapoly0004s0143 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain21.170.6786
18 Mapoly0188s0016 -21.210.7577
19 Mapoly0008s0010 [PF01464] Transglycosylase SLT domain22.450.7262
20 Mapoly0030s0061 [GO:0005663] DNA replication factor C complex; [GO:0005524] ATP binding; [GO:0006260] DNA replication; [GO:0003689] DNA clamp loader activity; [PF00533] BRCA1 C Terminus (BRCT) domain; [K10754] replication factor C subunit 1; [PTHR23389] CHROMOSOME TRANSMISSION FIDELITY FACTOR 18; [PF00004] ATPase family associated with various cellular activities (AAA); [PF08519] Replication factor RFC1 C terminal domain; [KOG1968] Replication factor C, subunit RFC1 (large subunit)23.020.7768
21 Mapoly0003s0023 -24.150.7730
22 Mapoly0029s0079 [GO:0042393] histone binding; [PF12165] Domain of unknown function (DUF3594); [GO:0006355] regulation of transcription, DNA-dependent; [KOG1632] Uncharacterized PHD Zn-finger protein; [PF00628] PHD-finger; [GO:0005515] protein binding; [PTHR12321] CPG BINDING PROTEIN26.530.7570
23 Mapoly0033s0127 [PF01713] Smr domain; [PTHR13308] UNCHARACTERIZED; [PF08590] Domain of unknown function (DUF1771)27.060.7692
24 Mapoly0019s0098 [PF13345] Domain of unknown function (DUF4098)27.460.7051
25 Mapoly0057s0080 [PTHR15140:SF6] SUBFAMILY NOT NAMED; [KOG3207] Beta-tubulin folding cofactor E; [PF01302] CAP-Gly domain; [PTHR15140] TUBULIN-SPECIFIC CHAPERONE E28.460.7473
26 Mapoly0108s0026 [GO:0016020] membrane; [GO:0006486] protein glycosylation; [KOG2292] Oligosaccharyltransferase, STT3 subunit; [2.4.1.119] Transferred entry: 2.4.99.18.; [PTHR13872] 60S RIBOSOMAL PROTEIN L35; [K07151] dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119]; [PF02516] Oligosaccharyl transferase STT3 subunit; [GO:0004576] oligosaccharyl transferase activity28.720.7309
27 Mapoly0003s0160 [PTHR13608:SF3] SUBFAMILY NOT NAMED; [PTHR13608] UNCHARACTERIZED32.730.7426
28 Mapoly0113s0020 [GO:0003677] DNA binding; [PTHR12604:SF2] KU P70 DNA HELICASE; [K10884] ATP-dependent DNA helicase 2 subunit 1; [GO:0042162] telomeric DNA binding; [PF03730] Ku70/Ku80 C-terminal arm; [PF02735] Ku70/Ku80 beta-barrel domain; [PF03731] Ku70/Ku80 N-terminal alpha/beta domain; [GO:0043564] Ku70:Ku80 complex; [GO:0005634] nucleus; [GO:0004003] ATP-dependent DNA helicase activity; [GO:0003676] nucleic acid binding; [KOG2327] DNA-binding subunit of a DNA-dependent protein kinase (Ku70 autoantigen); [PTHR12604] KU AUTOANTIGEN DNA HELICASE; [GO:0003684] damaged DNA binding; [GO:0006303] double-strand break repair via nonhomologous end joining; [PF02037] SAP domain; [GO:0000723] telomere maintenance32.860.7135
29 Mapoly0014s0056 [PF07085] DRTGG domain; [PTHR23406] MALIC ENZYME-RELATED; [PF13500] AAA domain; [GO:0016746] transferase activity, transferring acyl groups; [GO:0008152] metabolic process; [PTHR23406:SF3] PHOSPHATE ACETYLTRANSFERASE; [PF01515] Phosphate acetyl/butaryl transferase33.230.6895
30 Mapoly0027s0125 [GO:0005524] ATP binding; [GO:0035299] inositol pentakisphosphate 2-kinase activity; [PTHR14456] INOSITOL POLYPHOSPHATE KINASE 1; [PF06090] Inositol-pentakisphosphate 2-kinase; [KOG4749] Inositol polyphosphate kinase33.260.6958
31 Mapoly0043s0127 [GO:0031625] ubiquitin protein ligase binding; [GO:0031461] cullin-RING ubiquitin ligase complex; [GO:0006511] ubiquitin-dependent protein catabolic process; [K10609] cullin 4; [PF10557] Cullin protein neddylation domain; [PTHR11932] CULLIN; [PF00888] Cullin family; [KOG2167] Cullins; [PTHR11932:SF27] SUBFAMILY NOT NAMED33.940.7392
32 Mapoly0131s0020 [KOG1010] Rb (Retinoblastoma tumor suppressor)-related protein; [PF01858] Retinoblastoma-associated protein A domain; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PF01857] Retinoblastoma-associated protein B domain; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF11934] Domain of unknown function (DUF3452); [GO:0051726] regulation of cell cycle; [PTHR13742] RETINOBLASTOMA-ASSOCIATED PROTEIN (RB)-RELATED; [GO:0007049] cell cycle35.920.7326
33 Mapoly0052s0101 -37.310.7108
34 Mapoly0057s0100 [PTHR24414] FAMILY NOT NAMED; [GO:0005515] protein binding; [PTHR24414:SF14] SUBFAMILY NOT NAMED; [PF01344] Kelch motif39.820.7047
35 Mapoly0061s0142 -40.800.6530
36 Mapoly0004s0188 [GO:0005840] ribosome; [K02991] small subunit ribosomal protein S6e; [PTHR11502] 40S RIBOSOMAL PROTEIN S6; [KOG1646] 40S ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01092] Ribosomal protein S6e; [GO:0006412] translation42.990.7609
37 Mapoly0056s0014 [GO:0016021] integral to membrane; [KOG3574] Acetyl-CoA transporter; [GO:0008521] acetyl-CoA transporter activity; [PTHR12778:SF3] SOLUTE CARRIER FAMILY 33 (ACETYL-COA TRANSPORTER); [PF13000] Acetyl-coenzyme A transporter 1; [PTHR12778] SOLUTE CARRIER FAMILY 33 (ACETYL-COA TRANSPORTER)-RELATED43.470.6897
38 Mapoly0011s0044 [K03132] transcription initiation factor TFIID subunit 7; [PF04658] TAFII55 protein conserved region; [PTHR12228] TRANSCRIPTION INITIATION FACTOR TFIID 55 KD SUBUNIT-RELATED; [GO:0005669] transcription factor TFIID complex; [GO:0006367] transcription initiation from RNA polymerase II promoter43.710.7091
39 Mapoly0104s0042 [PTHR22846:SF2] TRANSDUCIN BETA-LIKE 1; [GO:0005515] protein binding; [PTHR22846] WD40 REPEAT PROTEIN; [KOG0273] Beta-transducin family (WD-40 repeat) protein; [PF08513] LisH; [PF00400] WD domain, G-beta repeat43.820.7443
40 Mapoly0004s0045 -44.700.6790
41 Mapoly0061s0032 [GO:0016020] membrane; [PF07933] Protein of unknown function (DUF1681); [PTHR12847:SF4] SUBFAMILY NOT NAMED; [KOG2500] Uncharacterized conserved protein; [GO:0006897] endocytosis; [PTHR12847] ATP-BINDING CASSETTE (ABC) TRANSPORTER-RELATED45.280.7171
42 Mapoly0013s0108 [PTHR12750] UNCHARACTERIZED; [GO:0003993] acid phosphatase activity; [PF00328] Histidine phosphatase superfamily (branch 2); [KOG1057] Arp2/3 complex-interacting protein VIP1/Asp1, involved in regulation of actin cytoskeleton45.560.6567
43 Mapoly0086s0056 [1.1.1.200] Aldose-6-phosphate reductase (NADPH).; [KOG1577] Aldo/keto reductase family proteins; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family; [K00085] aldose-6-phosphate reductase (NADPH2) [EC:1.1.1.200]45.830.7279
44 Mapoly0020s0073 [PF05602] Cleft lip and palate transmembrane protein 1 (CLPTM1); [PTHR21347] CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED; [KOG2489] Transmembrane protein; [PTHR21347:SF0] SUBFAMILY NOT NAMED48.340.7059
45 Mapoly0163s0019 [PTHR12677] UNCHARACTERIZED; [PF09335] SNARE associated Golgi protein48.470.6325
46 Mapoly0029s0099 [PF13589] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PTHR23336:SF7] SUBFAMILY NOT NAMED; [KOG1845] MORC family ATPases; [PTHR23336] ZINC FINGER CW-TYPE COILED-COIL DOMAIN PROTEIN 3.48.660.7310
47 Mapoly0005s0195 [KOG0031] Myosin regulatory light chain, EF-Hand protein superfamily; [PTHR20875] FAMILY NOT NAMED; [PTHR20875:SF0] SUBFAMILY NOT NAMED50.080.6728
48 Mapoly0144s0027 [PTHR12872] ALPHA-N-ACETYLGLUCOSAMINIDASE; [KOG2233] Alpha-N-acetylglucosaminidase; [PF05089] Alpha-N-acetylglucosaminidase (NAGLU) tim-barrel domain; [K01205] alpha-N-acetylglucosaminidase [EC:3.2.1.50]; [3.2.1.50] Alpha-N-acetylglucosaminidase.; [PF12972] Alpha-N-acetylglucosaminidase (NAGLU) C-terminal domain; [PF12971] Alpha-N-acetylglucosaminidase (NAGLU) N-terminal domain51.250.7247
49 Mapoly0174s0020 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain; [KOG1801] tRNA-splicing endonuclease positive effector (SEN1)53.620.7361
50 Mapoly0094s0054 [PTHR13923] SEC31-RELATED PROTEIN54.500.6857
Showing 1 to 50 of 200 records
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