Guide Gene
- Gene ID
- Mapoly0131s0020
- Organism
- Marchantia polymorpha
- Platform ID
- Mpo
- Description
- [KOG1010] Rb (Retinoblastoma tumor suppressor)-related protein; [PF01858] Retinoblastoma-associated protein A domain; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PF01857] Retinoblastoma-associated protein B domain; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF11934] Domain of unknown function (DUF3452); [GO:0051726] regulation of cell cycle; [PTHR13742] RETINOBLASTOMA-ASSOCIATED PROTEIN (RB)-RELATED; [GO:0007049] cell cycle
Coexpressed Gene List
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Marchantia polymorphaRank Gene ID Description MR PCC Guide Mapoly0131s0020 [KOG1010] Rb (Retinoblastoma tumor suppressor)-related protein; [PF01858] Retinoblastoma-associated protein A domain; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PF01857] Retinoblastoma-associated protein B domain; [GO:0005634] nucleus; [GO:0006351] transcription, DNA-dependent; [PF11934] Domain of unknown function (DUF3452); [GO:0051726] regulation of cell cycle; [PTHR13742] RETINOBLASTOMA-ASSOCIATED PROTEIN (RB)-RELATED; [GO:0007049] cell cycle 0.00 1.0000 1 Mapoly0037s0071 [GO:0006355] regulation of transcription, DNA-dependent; [KOG0835] Cyclin L; [GO:0019901] protein kinase binding; [PF00134] Cyclin, N-terminal domain; [PTHR10026] CYCLIN; [PTHR10026:SF13] CYCLIN-L1-RELATED; [GO:0000079] regulation of cyclin-dependent protein serine/threonine kinase activity 2.83 0.8400 2 Mapoly0114s0002 [PF03168] Late embryogenesis abundant protein; [PTHR31852] FAMILY NOT NAMED 3.00 0.8311 3 Mapoly0020s0153 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PF00580] UvrD/REP helicase N-terminal domain; [PF13361] UvrD-like helicase C-terminal domain; [GO:0016787] hydrolase activity; [KOG2108] 3'-5' DNA helicase; [3.6.4.12] DNA helicase.; [K03657] DNA helicase II / ATP-dependent DNA helicase PcrA [EC:3.6.4.12]; [GO:0004003] ATP-dependent DNA helicase activity; [PTHR11070] UVRD / RECB / PCRA DNA HELICASE FAMILY MEMBER 3.46 0.8197 4 Mapoly0104s0042 [PTHR22846:SF2] TRANSDUCIN BETA-LIKE 1; [GO:0005515] protein binding; [PTHR22846] WD40 REPEAT PROTEIN; [KOG0273] Beta-transducin family (WD-40 repeat) protein; [PF08513] LisH; [PF00400] WD domain, G-beta repeat 3.87 0.8412 5 Mapoly0057s0100 [PTHR24414] FAMILY NOT NAMED; [GO:0005515] protein binding; [PTHR24414:SF14] SUBFAMILY NOT NAMED; [PF01344] Kelch motif 6.48 0.7710 6 Mapoly0033s0125 [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PTHR11452] ALPHA-GALACTOSIDASE/ALPHA-N-ACETYLGALACTOSAMINIDASE; [PF02065] Melibiase 6.93 0.7533 7 Mapoly0127s0050 [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00515] Tetratricopeptide repeat; [PTHR22904] TPR REPEAT CONTAINING PROTEIN; [PF13877] Potential Monad-binding region of RPAP3 8.94 0.7812 8 Mapoly0158s0019 [PTHR24012] FAMILY NOT NAMED; [KOG4205] RNA-binding protein musashi/mRNA cleavage and polyadenylation factor I complex, subunit HRP1; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 9.17 0.8155 9 Mapoly0030s0061 [GO:0005663] DNA replication factor C complex; [GO:0005524] ATP binding; [GO:0006260] DNA replication; [GO:0003689] DNA clamp loader activity; [PF00533] BRCA1 C Terminus (BRCT) domain; [K10754] replication factor C subunit 1; [PTHR23389] CHROMOSOME TRANSMISSION FIDELITY FACTOR 18; [PF00004] ATPase family associated with various cellular activities (AAA); [PF08519] Replication factor RFC1 C terminal domain; [KOG1968] Replication factor C, subunit RFC1 (large subunit) 9.22 0.8195 10 Mapoly0058s0075 [PF00773] RNB domain; [PTHR23355:SF9] RIBONUCLEASE R; [PTHR23355] RIBONUCLEASE 10.20 0.7854 11 Mapoly0011s0011 [2.7.7.1] Nicotinamide-nucleotide adenylyltransferase.; [GO:0009058] biosynthetic process; [K06210] nicotinamide mononucleotide adenylyltransferase [EC:2.7.7.1 2.7.7.18]; [KOG3199] Nicotinamide mononucleotide adenylyl transferase; [PTHR12039:SF0] SUBFAMILY NOT NAMED; [GO:0009435] NAD biosynthetic process; [PF01467] Cytidylyltransferase; [GO:0016779] nucleotidyltransferase activity; [GO:0003824] catalytic activity; [PF13837] Myb/SANT-like DNA-binding domain; [2.7.7.18] Nicotinate-nucleotide adenylyltransferase.; [PTHR12039] NICOTINAMIDE MONONUCLEOTIDE ADENYLYLTRANSFERASE 10.95 0.7600 12 Mapoly0033s0088 [GO:0005515] protein binding; [PTHR19918:SF8] gb def: Meiosis-specific APC/C activator protein AMA1 (Activator of meiotic APC/C protei; [KOG0305] Anaphase promoting complex, Cdc20, Cdh1, and Ama1 subunits; [K03363] cell division cycle 20, cofactor of APC complex; [PTHR19918] CELL DIVISION CYCLE 20 (CDC20) (FIZZY)-RELATED; [PF00400] WD domain, G-beta repeat 12.41 0.8031 13 Mapoly0057s0080 [PTHR15140:SF6] SUBFAMILY NOT NAMED; [KOG3207] Beta-tubulin folding cofactor E; [PF01302] CAP-Gly domain; [PTHR15140] TUBULIN-SPECIFIC CHAPERONE E 15.00 0.7821 14 Mapoly0014s0134 [KOG2442] Uncharacterized conserved protein, contains PA domain; [PF02225] PA domain; [PTHR12174] SIGNAL PEPTIDE PEPTIDASE; [GO:0016021] integral to membrane; [PF04258] Signal peptide peptidase; [GO:0004190] aspartic-type endopeptidase activity 16.00 0.7709 15 Mapoly0038s0082 [GO:0005524] ATP binding; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [KOG0583] Serine/threonine protein kinase; [GO:0006468] protein phosphorylation; [PTHR24343:SF15] CARBON CATABOLITE-DEREPRESSING PROTEIN KINASE; [PF02149] Kinase associated domain 1; [PTHR24343] SERINE/THREONINE KINASE 17.15 0.7576 16 Mapoly0033s0156 [KOG0266] WD40 repeat-containing protein; [GO:0005515] protein binding; [PTHR22847] WD40 REPEAT PROTEIN; [PF00400] WD domain, G-beta repeat 17.49 0.7691 17 Mapoly0148s0010 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR22766] RING FINGER PROTEIN 24-RELATED; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding 19.44 0.7073 18 Mapoly0019s0054 [PTHR13040:SF2] SUBFAMILY NOT NAMED; [GO:0005737] cytoplasm; [K08339] autophagy-related protein 5; [PTHR13040] AUTOPHAGY PROTEIN 5; [GO:0006914] autophagy; [PF04106] Autophagy protein Apg5; [KOG2976] Protein involved in autophagy and nutrient starvation 19.80 0.6873 19 Mapoly0167s0006 - 20.40 0.7728 20 Mapoly0072s0095 [PTHR12419:SF6] SUBFAMILY NOT NAMED; [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PF02338] OTU-like cysteine protease 20.66 0.7103 21 Mapoly0014s0224 [GO:0003677] DNA binding; [PTHR31251] FAMILY NOT NAMED; [GO:0005634] nucleus; [PF03110] SBP domain 22.00 0.7573 22 Mapoly0063s0041 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR23340] ARGININE/SERINE RICH SPLICING FACTOR SF4/14; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding; [PF01805] Surp module 22.91 0.7709 23 Mapoly0174s0020 [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain; [KOG1801] tRNA-splicing endonuclease positive effector (SEN1) 23.45 0.7787 24 Mapoly0052s0101 - 23.66 0.7396 25 Mapoly0060s0006 [GO:0016021] integral to membrane; [PF03124] EXS family; [PTHR10783] XENOTROPIC AND POLYTROPIC RETROVIRUS RECEPTOR 1-RELATED; [PTHR10783:SF9] EXS FAMILY PROTEIN / ERD1/XPR1/SYG1 FAMILY PROTEIN 24.25 0.7464 26 Mapoly0041s0089 [PF10377] Autophagy-related protein 11; [PTHR13222:SF1] gb def: cg1347 gene product [drosophila melanogaster]; [PTHR13222] CGTHBA PROTEIN (-14 GENE PROTEIN) 24.49 0.6866 27 Mapoly0125s0028 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [KOG0205] Plasma membrane H+-transporting ATPase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase 24.98 0.7753 28 Mapoly0092s0014 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain 25.10 0.7427 29 Mapoly0015s0190 - 25.42 0.7625 30 Mapoly0163s0016 [PTHR31934] FAMILY NOT NAMED; [PF12697] Alpha/beta hydrolase family 28.25 0.7362 31 Mapoly0131s0029 [PF02450] Lecithin:cholesterol acyltransferase; [KOG2369] Lecithin:cholesterol acyltransferase (LCAT)/Acyl-ceramide synthase; [PTHR11440] LECITHIN-CHOLESTEROL ACYLTRANSFERASE-RELATED; [PTHR11440:SF3] LECITHINE CHOLESTEROL ACYLTRANSFERASE-RELATED; [GO:0006629] lipid metabolic process; [GO:0008374] O-acyltransferase activity 28.57 0.6864 32 Mapoly0008s0016 [PF00249] Myb-like DNA-binding domain; [GO:0003682] chromatin binding; [PTHR21717] TELOMERIC REPEAT BINDING PROTEIN; [PTHR21717:SF9] TELOMERIC REPEAT BINDING PROTEIN 1 28.62 0.6909 33 Mapoly0105s0015 [GO:0003677] DNA binding; [KOG2393] Transcription initiation factor IIF, large subunit (RAP74); [GO:0032968] positive regulation of transcription elongation from RNA polymerase II promoter; [K03138] transcription initiation factor TFIIF subunit alpha; [PF05793] Transcription initiation factor IIF, alpha subunit (TFIIF-alpha); [PTHR13011] TFIIF-ALPHA; [GO:0005634] nucleus; [GO:0006367] transcription initiation from RNA polymerase II promoter 31.61 0.7479 34 Mapoly0025s0110 - 31.81 0.7308 35 Mapoly0125s0024 - 32.91 0.7169 36 Mapoly0005s0201 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0005515] protein binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR12348] TSC22; [PF00498] FHA domain 33.23 0.7571 37 Mapoly0058s0108 [GO:0003677] DNA binding; [KOG0214] RNA polymerase II, second largest subunit; [PF04567] RNA polymerase Rpb2, domain 5; [PF04565] RNA polymerase Rpb2, domain 3; [PTHR20856] DNA-DIRECTED RNA POLYMERASE I SUBUNIT 2; [PF00562] RNA polymerase Rpb2, domain 6; [PF04566] RNA polymerase Rpb2, domain 4; [GO:0032549] ribonucleoside binding; [PF04561] RNA polymerase Rpb2, domain 2; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04560] RNA polymerase Rpb2, domain 7; [PF04563] RNA polymerase beta subunit 34.58 0.7493 38 Mapoly0001s0066 [PF04884] Vitamin B6 photo-protection and homoeostasis; [KOG4249] Uncharacterized conserved protein; [PTHR12770] FAMILY NOT NAMED 34.64 0.7295 39 Mapoly0029s0152 [PTHR15239] UNCHARACTERIZED; [PF05833] Fibronectin-binding protein A N-terminus (FbpA); [PTHR15239:SF1] COLON CANCER ANTIGEN 1; [GO:0008270] zinc ion binding; [PF00098] Zinc knuckle; [GO:0003676] nucleic acid binding; [PF11923] Domain of unknown function (DUF3441); [KOG2030] Predicted RNA-binding protein; [PF05670] Domain of unknown function (DUF814) 35.71 0.7530 40 Mapoly0001s0551 [PF03470] XS zinc finger domain; [PTHR21596] RIBONUCLEASE P PROTEIN SUBUNIT P38-RELATED; [PF03469] XH domain; [PF03468] XS domain; [GO:0031047] gene silencing by RNA; [PTHR21596:SF3] TRANSCRIPTION FACTOR X1-LIKE 35.92 0.7326 41 Mapoly0029s0009 [PF12313] NPR1/NIM1 like defence protein C terminal; [PF00651] BTB/POZ domain; [GO:0005515] protein binding; [PF12796] Ankyrin repeats (3 copies); [PTHR24198] ANKYRIN REPEAT AND PROTEIN KINASE DOMAIN-CONTAINING PROTEIN 36.88 0.6960 42 Mapoly0044s0031 [3.6.3.8] Calcium-transporting ATPase.; [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [PF13246] Putative hydrolase of sodium-potassium ATPase alpha subunit; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [K01537] Ca2+-transporting ATPase [EC:3.6.3.8]; [PF00689] Cation transporting ATPase, C-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [KOG0202] Ca2+ transporting ATPase 37.82 0.6712 43 Mapoly0043s0127 [GO:0031625] ubiquitin protein ligase binding; [GO:0031461] cullin-RING ubiquitin ligase complex; [GO:0006511] ubiquitin-dependent protein catabolic process; [K10609] cullin 4; [PF10557] Cullin protein neddylation domain; [PTHR11932] CULLIN; [PF00888] Cullin family; [KOG2167] Cullins; [PTHR11932:SF27] SUBFAMILY NOT NAMED 38.68 0.7428 44 Mapoly0001s0473 - 39.12 0.7687 45 Mapoly0009s0036 [KOG4259] Putative nucleic acid-binding protein Hcc-1/proliferation associated cytokine-inducible protein, contains SAP domain; [GO:0003676] nucleic acid binding; [PTHR21594] NUCLEAR PROTEIN HCC-1/THO1; [PF02037] SAP domain 39.47 0.7381 46 Mapoly0061s0032 [GO:0016020] membrane; [PF07933] Protein of unknown function (DUF1681); [PTHR12847:SF4] SUBFAMILY NOT NAMED; [KOG2500] Uncharacterized conserved protein; [GO:0006897] endocytosis; [PTHR12847] ATP-BINDING CASSETTE (ABC) TRANSPORTER-RELATED 39.80 0.7316 47 Mapoly0046s0119 [PF01545] Cation efflux family; [KOG1484] Putative Zn2+ transporter MSC2 (cation diffusion facilitator superfamily); [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [K03295] cation efflux system protein, CDF family; [GO:0006812] cation transport; [GO:0008324] cation transmembrane transporter activity; [PTHR11562] CATION EFFLUX PROTEIN/ ZINC TRANSPORTER 41.56 0.6608 48 Mapoly0006s0043 [PF04998] RNA polymerase Rpb1, domain 5; [GO:0003677] DNA binding; [PF00623] RNA polymerase Rpb1, domain 2; [PTHR19376] DNA-DIRECTED RNA POLYMERASE; [PF05000] RNA polymerase Rpb1, domain 4; [PF11523] Protein of unknown function (DUF3223); [PF04997] RNA polymerase Rpb1, domain 1; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PF04983] RNA polymerase Rpb1, domain 3; [PTHR19376:SF33] DNA-DIRECTED RNA POLYMERASE SUBUNIT BETA'' 42.99 0.7040 49 Mapoly0014s0032 [PTHR14873] FAMILY NOT NAMED; [PF10521] Protein of unknown function (DUF2454); [PTHR14873:SF1] SUBFAMILY NOT NAMED 43.36 0.7305 50 Mapoly0004s0128 [GO:0005524] ATP binding; [K08864] tousled-like kinase [EC:2.7.11.1]; [PF00069] Protein kinase domain; [GO:0004672] protein kinase activity; [2.7.11.1] Non-specific serine/threonine protein kinase.; [GO:0006468] protein phosphorylation; [PTHR22974] MIXED LINEAGE PROTEIN KINASE; [KOG1151] Tousled-like protein kinase 44.08 0.7451