Guide Gene

Gene ID
Mapoly0069s0062
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR24012] FAMILY NOT NAMED; [KOG0107] Alternative splicing factor SRp20/9G8 (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0069s0062 [PTHR24012] FAMILY NOT NAMED; [KOG0107] Alternative splicing factor SRp20/9G8 (RRM superfamily); [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain) 0.00 1.0000
1 Mapoly0060s0109 [GO:0005840] ribosome; [K02993] small subunit ribosomal protein S7e; [KOG3320] 40S ribosomal protein S7; [GO:0003735] structural constituent of ribosome; [PF01251] Ribosomal protein S7e; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR11278:SF0] SUBFAMILY NOT NAMED; [PTHR11278] 40S RIBOSOMAL PROTEIN S73.160.9454
2 Mapoly0001s0112 [GO:0005840] ribosome; [K02882] large subunit ribosomal protein L18Ae; [KOG0829] 60S ribosomal protein L18A; [PTHR10052] 60S RIBOSOMAL PROTEIN L18A; [PF01775] Ribosomal L18ae/LX protein domain; [GO:0006412] translation; [GO:0003735] structural constituent of ribosome9.000.9309
3 Mapoly0014s0081 [GO:0016020] membrane; [PF01554] MatE; [GO:0015238] drug transmembrane transporter activity; [GO:0015297] antiporter activity; [GO:0055085] transmembrane transport; [PTHR11206] MULTIDRUG RESISTANCE PROTEIN; [KOG1347] Uncharacterized membrane protein, predicted efflux pump; [GO:0006855] drug transmembrane transport9.900.8160
4 Mapoly0098s0025 [GO:0005840] ribosome; [K02991] small subunit ribosomal protein S6e; [PTHR11502] 40S RIBOSOMAL PROTEIN S6; [KOG1646] 40S ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01092] Ribosomal protein S6e; [GO:0006412] translation10.770.9344
5 Mapoly0001s0307 [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding; [PTHR22764] RING FINGER DOMAIN-CONTAINING12.850.7650
6 Mapoly0118s0037 [GO:0005840] ribosome; [K02883] large subunit ribosomal protein L18e; [PF00828] Ribosomal protein L18e/L15; [KOG1714] 60s ribosomal protein L18; [GO:0003735] structural constituent of ribosome; [PTHR10934] 60S RIBOSOMAL PROTEIN L18; [GO:0005622] intracellular; [GO:0006412] translation13.860.9217
7 Mapoly0095s0001 [GO:0005840] ribosome; [PTHR11517] 60S RIBOSOMAL PROTEIN L37A; [GO:0003735] structural constituent of ribosome; [PF01780] Ribosomal L37ae protein family; [GO:0005622] intracellular; [K02921] large subunit ribosomal protein L37Ae; [KOG0402] 60S ribosomal protein L37; [GO:0006412] translation16.250.9238
8 Mapoly0001s0014 [GO:0005840] ribosome; [GO:0003723] RNA binding; [KOG3181] 40S ribosomal protein S3; [PF07650] KH domain; [PF00189] Ribosomal protein S3, C-terminal domain; [GO:0006412] translation; [K02985] small subunit ribosomal protein S3e; [GO:0003735] structural constituent of ribosome; [PTHR11760] 30S/40S RIBOSOMAL PROTEIN S319.240.9234
9 Mapoly0054s0045 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [K02932] large subunit ribosomal protein L5e; [PTHR23410] RIBOSOMAL PROTEIN L5-RELATED; [GO:0005622] intracellular; [GO:0008097] 5S rRNA binding; [KOG0875] 60S ribosomal protein L5; [PF14204] Ribosomal L18 C-terminal region; [GO:0006412] translation19.800.9014
10 Mapoly0021s0076 [GO:0005840] ribosome; [PTHR12538] 40S RIBOSOMAL PROTEIN S26; [GO:0003735] structural constituent of ribosome; [K02976] small subunit ribosomal protein S26e; [GO:0005622] intracellular; [PF01283] Ribosomal protein S26e; [GO:0006412] translation; [KOG1768] 40s ribosomal protein S2623.520.9197
11 Mapoly0001s0109 [PF04725] Photosystem II 10 kDa polypeptide PsbR; [GO:0009523] photosystem II; [GO:0042651] thylakoid membrane; [GO:0009654] oxygen evolving complex; [K03541] photosystem II 10kDa protein; [GO:0015979] photosynthesis24.680.8237
12 Mapoly0075s0037 [K03257] translation initiation factor eIF-4A; [GO:0005524] ATP binding; [KOG0328] Predicted ATP-dependent RNA helicase FAL1, involved in rRNA maturation, DEAD-box superfamily; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding24.740.8123
13 Mapoly0041s0045 -24.820.6842
14 Mapoly0135s0041 [GO:0005840] ribosome; [GO:0006414] translational elongation; [PTHR21141] 60S ACIDIC RIBOSOMAL PROTEIN FAMILY MEMBER; [KOG1762] 60s acidic ribosomal protein P1; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [K02942] large subunit ribosomal protein LP1; [PF00428] 60s Acidic ribosomal protein25.100.9180
15 Mapoly0014s0079 [GO:0005840] ribosome; [PTHR10902] 60S RIBOSOMAL PROTEIN L35A; [PF01247] Ribosomal protein L35Ae; [PTHR10902:SF0] 60S RIBOSOMAL PROTEIN L35A; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [KOG0887] 60S ribosomal protein L35A/L37; [GO:0006412] translation25.300.9194
16 Mapoly0097s0080 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG3436] 60S ribosomal protein L35; [PTHR13872] 60S RIBOSOMAL PROTEIN L35; [GO:0005622] intracellular; [PF00831] Ribosomal L29 protein; [GO:0006412] translation; [K02918] large subunit ribosomal protein L35e26.660.9189
17 Mapoly0166s0006 [PF06093] Spt4/RpoE2 zinc finger; [KOG3490] Transcription elongation factor SPT4; [PTHR12882:SF0] SUBFAMILY NOT NAMED; [PTHR12882] SUPPRESSOR OF TY 428.860.7969
18 Mapoly0082s0072 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [KOG0865] Cyclophilin type peptidyl-prolyl cis-trans isomerase; [GO:0000413] protein peptidyl-prolyl isomerization; [GO:0006457] protein folding; [K01802] peptidylprolyl isomerase [EC:5.2.1.8]; [5.2.1.8] Peptidylprolyl isomerase.28.930.8963
19 Mapoly0090s0015 [GO:0005840] ribosome; [K02971] small subunit ribosomal protein S21e; [PTHR10442] 40S RIBOSOMAL PROTEIN S21; [KOG3486] 40S ribosomal protein S21; [PF01249] Ribosomal protein S21e; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation29.290.9166
20 Mapoly0064s0119 [GO:0005840] ribosome; [GO:0005515] protein binding; [K02927] large subunit ribosomal protein L40e; [GO:0003735] structural constituent of ribosome; [KOG0003] Ubiquitin/60s ribosomal protein L40 fusion; [PF00240] Ubiquitin family; [PTHR10666] UBIQUITIN; [GO:0006412] translation; [PF01020] Ribosomal L40e family30.400.9166
21 Mapoly0122s0034 [GO:0005840] ribosome; [PTHR10394] 40S RIBOSOMAL PROTEIN S8; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [K02995] small subunit ribosomal protein S8e; [GO:0006412] translation; [PF01201] Ribosomal protein S8e; [KOG3283] 40S ribosomal protein S830.740.9095
22 Mapoly0028s0093 [PTHR12146] 40S RIBOSOMAL PROTEIN S10; [KOG3344] 40s ribosomal protein s10; [K02947] small subunit ribosomal protein S10e; [PF03501] Plectin/S10 domain30.980.9140
23 Mapoly0024s0116 [K03231] elongation factor EF-1 alpha subunit [EC:3.6.5.3]; [3.6.5.3] Protein-synthesizing GTPase.; [PF03143] Elongation factor Tu C-terminal domain; [PF00009] Elongation factor Tu GTP binding domain; [GO:0003924] GTPase activity; [PTHR23115] TRANSLATION FACTOR; [GO:0005525] GTP binding; [PF03144] Elongation factor Tu domain 2; [KOG0052] Translation elongation factor EF-1 alpha/Tu31.750.8278
24 Mapoly0025s0101 [GO:0005840] ribosome; [K02929] large subunit ribosomal protein L44e; [PF00935] Ribosomal protein L44; [GO:0003735] structural constituent of ribosome; [KOG3464] 60S ribosomal protein L44; [PTHR10369] 60S RIBOSOMAL PROTEIN L36A/L44; [GO:0005622] intracellular; [PTHR10369:SF3] 60S RIBOSOMAL PROTEIN L44; [GO:0006412] translation32.250.9158
25 Mapoly0009s0137 [GO:0005840] ribosome; [PTHR10965] 60S RIBOSOMAL PROTEIN L38; [PF01781] Ribosomal L38e protein family; [KOG3499] 60S ribosomal protein L38; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [K02923] large subunit ribosomal protein L38e; [GO:0006412] translation33.540.9142
26 Mapoly0002s0140 [GO:0005840] ribosome; [KOG3411] 40S ribosomal protein S19; [GO:0003735] structural constituent of ribosome; [PTHR11710] 40S RIBOSOMAL PROTEIN S19; [GO:0005622] intracellular; [K02966] small subunit ribosomal protein S19e; [GO:0006412] translation; [PF01090] Ribosomal protein S19e34.500.9157
27 Mapoly0191s0009 [PTHR23123] PHD/F-BOX CONTAINING PROTEIN; [1.14.11.27] [Histone H3]-lysine-36 demethylase.; [PF13621] Cupin-like domain; [K10276] F-box and leucine-rich repeat protein 10/11 [EC:1.14.11.27]34.860.7832
28 Mapoly0150s0019 [KOG2816] Predicted transporter ADD1 (major facilitator superfamily); [PTHR24003] MAJOR FACILITATOR SUPERFAMILY DOMAIN-CONTAINING PROTEIN-RELATED; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [PF07690] Major Facilitator Superfamily35.300.7579
29 Mapoly0050s0096 [PF00327] Ribosomal protein L30p/L7e; [K02937] large subunit ribosomal protein L7e; [PTHR11524] 60S RIBOSOMAL PROTEIN L7; [PF08079] Ribosomal L30 N-terminal domain; [KOG3184] 60S ribosomal protein L736.500.9133
30 Mapoly0159s0015 -36.740.9055
31 Mapoly0055s0016 [PF00450] Serine carboxypeptidase; [3.4.16.5] Carboxypeptidase C.; [K13289] cathepsin A (carboxypeptidase C) [EC:3.4.16.5]; [PTHR11802] SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE; [KOG1282] Serine carboxypeptidases (lysosomal cathepsin A); [GO:0006508] proteolysis; [GO:0004185] serine-type carboxypeptidase activity37.280.7798
32 Mapoly0030s0040 [GO:0005840] ribosome; [K02875] large subunit ribosomal protein L14e; [PF01929] Ribosomal protein L14; [GO:0003735] structural constituent of ribosome; [KOG3421] 60S ribosomal protein L14; [GO:0005622] intracellular; [GO:0006412] translation; [PTHR11127] 60S RIBOSOMAL PROTEIN L1437.560.9134
33 Mapoly0037s0101 [PTHR31126:SF0] SUBFAMILY NOT NAMED; [PF03162] Tyrosine phosphatase family; [PTHR31126] FAMILY NOT NAMED38.010.8270
34 Mapoly0044s0132 [GO:0005840] ribosome; [K02953] small subunit ribosomal protein S13e; [PTHR11885] RIBOSOMAL PROTEIN S15P/S13E; [KOG0400] 40S ribosomal protein S13; [PF00312] Ribosomal protein S15; [PF08069] Ribosomal S13/S15 N-terminal domain; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation38.390.9092
35 Mapoly0001s0237 [GO:0005840] ribosome; [KOG0746] 60S ribosomal protein L3 and related proteins; [PF00297] Ribosomal protein L3; [PTHR11363] 60S RIBOSOMAL PROTEIN L3-RELATED; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [K02925] large subunit ribosomal protein L3e; [GO:0006412] translation39.380.7788
36 Mapoly0114s0042 [K02975] small subunit ribosomal protein S25e; [KOG1767] 40S ribosomal protein S25; [PF03297] S25 ribosomal protein; [PTHR12850] FAMILY NOT NAMED39.470.9130
37 Mapoly0037s0104 [GO:0005524] ATP binding; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23074] AAA ATPASE39.950.7012
38 Mapoly0002s0232 [KOG1385] Nucleoside phosphatase; [GO:0016787] hydrolase activity; [PTHR11782] ADENOSINE/GUANOSINE DIPHOSPHATASE; [K14641] apyrase [EC:3.6.1.5]; [3.6.1.5] Apyrase.; [PF01150] GDA1/CD39 (nucleoside phosphatase) family40.000.8148
39 Mapoly0007s0191 [GO:0005840] ribosome; [KOG0886] 40S ribosomal protein S2; [K02870] large subunit ribosomal protein L12e; [PF03946] Ribosomal protein L11, N-terminal domain; [GO:0003735] structural constituent of ribosome; [PTHR11661] 60S RIBOSOMAL PROTEIN L12; [PF00298] Ribosomal protein L11, RNA binding domain; [GO:0006412] translation41.470.9124
40 Mapoly0081s0075 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED42.360.8564
41 Mapoly0008s0132 [GO:0005840] ribosome; [K02955] small subunit ribosomal protein S14e; [GO:0003735] structural constituent of ribosome; [KOG0407] 40S ribosomal protein S14; [PTHR11759] 40S RIBOSOMAL PROTEIN S14/30S RIBOSOMAL PROTEIN S11; [GO:0006412] translation; [PF00411] Ribosomal protein S1143.690.9080
42 Mapoly0148s0016 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG1790] 60s ribosomal protein L34; [GO:0005622] intracellular; [PTHR10759] 60S RIBOSOMAL PROTEIN L34; [K02915] large subunit ribosomal protein L34e; [GO:0006412] translation; [PF01199] Ribosomal protein L34e44.440.9071
43 Mapoly0020s0166 [GO:0005840] ribosome; [KOG3255] 60S ribosomal protein L9; [PF00347] Ribosomal protein L6; [GO:0003735] structural constituent of ribosome; [GO:0019843] rRNA binding; [K02940] large subunit ribosomal protein L9e; [PTHR11655] 60S/50S RIBOSOMAL PROTEIN L6/L9; [GO:0006412] translation44.740.9066
44 Mapoly0102s0008 [GO:0005840] ribosome; [KOG0893] 60S ribosomal protein L31; [PTHR10956] 60S RIBOSOMAL PROTEIN L31; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01198] Ribosomal protein L31e; [K02910] large subunit ribosomal protein L31e; [GO:0006412] translation45.170.9073
45 Mapoly0036s0118 [KOG1315] Predicted DHHC-type Zn-finger protein; [GO:0008270] zinc ion binding; [PF01529] DHHC palmitoyltransferase; [PTHR22883] ZINC FINGER DHHC DOMAIN CONTAINING PROTEIN45.350.7949
46 Mapoly0046s0064 [PF01702] Queuine tRNA-ribosyltransferase; [2.4.2.29] tRNA-guanine(34) transglycosylase.; [GO:0008479] queuine tRNA-ribosyltransferase activity; [PTHR11962] QUEUINE TRNA-RIBOSYLTRANSFERASE; [GO:0008616] queuosine biosynthetic process; [K00773] queuine tRNA-ribosyltransferase [EC:2.4.2.29]; [GO:0006400] tRNA modification; [KOG3909] Queuine-tRNA ribosyltransferase46.200.7477
47 Mapoly0033s0127 [PF01713] Smr domain; [PTHR13308] UNCHARACTERIZED; [PF08590] Domain of unknown function (DUF1771)47.750.8023
48 Mapoly0082s0073 [PTHR15160] VON HIPPEL-LINDAU PROTEIN; [GO:0004518] nuclease activity; [PF02577] Bifunctional nuclease; [PTHR15160:SF1] VON HIPPEL-LINDAU DISEASE TUMOR SUPPRESSOR49.640.7693
49 Mapoly0128s0013 [4.1.2.5] L-threonine aldolase.; [GO:0016829] lyase activity; [PF01212] Beta-eliminating lyase; [GO:0006520] cellular amino acid metabolic process; [KOG1368] Threonine aldolase; [PTHR10289] THREONINE ALDOLASE; [K01620] threonine aldolase [EC:4.1.2.5]50.340.7551
50 Mapoly0179s0010 [GO:0005840] ribosome; [KOG1753] 40S ribosomal protein S16; [GO:0003735] structural constituent of ribosome; [PF00380] Ribosomal protein S9/S16; [PTHR21569] RIBOSOMAL PROTEIN S9; [K02960] small subunit ribosomal protein S16e; [GO:0006412] translation51.370.9006
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