Guide Gene

Gene ID
Mapoly0123s0020
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0123s0020 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PTHR14950] HELICASE-RELATED; [PF00035] Double-stranded RNA binding motif; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity; [PF14709] double strand RNA binding domain from DEAD END PROTEIN 1 0.00 1.0000
1 Mapoly0037s0132 [PF00450] Serine carboxypeptidase; [PTHR11802] SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE; [KOG1282] Serine carboxypeptidases (lysosomal cathepsin A); [GO:0004185] serine-type carboxypeptidase activity; [GO:0006508] proteolysis3.870.6289
2 Mapoly0047s0001 [GO:0016758] transferase activity, transferring hexosyl groups; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase13.420.5186
3 Mapoly0040s0071 [GO:0005524] ATP binding; [KOG0055] Multidrug/pheromone exporter, ABC superfamily; [GO:0016021] integral to membrane; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PTHR24221] FAMILY NOT NAMED; [PF00005] ABC transporter17.860.4583
4 Mapoly0176s0004 [PTHR31245] FAMILY NOT NAMED19.440.5152
5 Mapoly0104s0036 [GO:0016020] membrane; [PF00072] Response regulator receiver domain; [PF02518] Histidine kinase-, DNA gyrase B-, and HSP90-like ATPase; [PF03924] CHASE domain; [GO:0000160] phosphorelay signal transduction system; [KOG0519] Sensory transduction histidine kinase; [GO:0007165] signal transduction; [PTHR24423] TWO-COMPONENT SENSOR HISTIDINE KINASE; [PF00512] His Kinase A (phospho-acceptor) domain; [GO:0000155] phosphorelay sensor kinase activity20.300.5188
6 Mapoly0137s0015 -22.780.5413
7 Mapoly0020s0073 [PF05602] Cleft lip and palate transmembrane protein 1 (CLPTM1); [PTHR21347] CLEFT LIP AND PALATE ASSOCIATED TRANSMEMBRANE PROTEIN-RELATED; [KOG2489] Transmembrane protein; [PTHR21347:SF0] SUBFAMILY NOT NAMED29.970.5482
8 Mapoly0005s0077 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0008270] zinc ion binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PF00320] GATA zinc finger37.320.5144
9 Mapoly0019s0131 [PTHR23111] ZINC FINGER PROTEIN; [GO:0008270] zinc ion binding; [PF00641] Zn-finger in Ran binding protein and others41.180.4782
10 Mapoly0027s0188 [GO:0035299] inositol pentakisphosphate 2-kinase activity; [GO:0005524] ATP binding; [PTHR14456] INOSITOL POLYPHOSPHATE KINASE 1; [PF06090] Inositol-pentakisphosphate 2-kinase; [KOG4749] Inositol polyphosphate kinase51.960.4891
11 Mapoly0094s0073 [PF03092] BT1 family; [PTHR31585] FAMILY NOT NAMED52.230.4691
12 Mapoly0003s0299 [GO:0055114] oxidation-reduction process; [PTHR11695:SF264] ZINC-BINDING ALCOHOL DEHYDROGENASE DOMAIN-CONTAINING PROTEIN 2; [K07119] uncharacterized protein; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase; [KOG4169] 15-hydroxyprostaglandin dehydrogenase and related dehydrogenases; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED52.780.4849
13 Mapoly0226s0004 [PTHR23316:SF1] gb def: Importin alpha-1 subunit (Karyopherin alpha-1 subunit); [PF00514] Armadillo/beta-catenin-like repeat; [GO:0005515] protein binding; [KOG0166] Karyopherin (importin) alpha; [PTHR23316] IMPORTIN ALPHA53.360.4886
14 Mapoly0036s0066 [PTHR31960] FAMILY NOT NAMED; [PF14299] Phloem protein 256.300.4965
15 Mapoly0021s0158 [GO:0008168] methyltransferase activity; [PTHR11006] PROTEIN ARGININE N-METHYLTRANSFERASE; [PTHR11006:SF4] PROTEIN ARGININE N-METHYLTRANSFERASE 7; [GO:0006479] protein methylation57.450.4938
16 Mapoly0009s0041 [PF01501] Glycosyl transferase family 8; [KOG1950] Glycosyl transferase, family 8 - glycogenin; [PTHR11183] GLYCOGENIN; [GO:0016757] transferase activity, transferring glycosyl groups60.560.4723
17 Mapoly0036s0043 [GO:0005515] protein binding; [PF00856] SET domain; [PTHR22884] SET DOMAIN PROTEINS65.590.5018
18 Mapoly0052s0101 -66.510.5057
19 Mapoly0078s0007 [K13983] putative helicase MOV10L1 [EC:3.6.4.13]; [KOG1804] RNA helicase; [3.6.4.13] RNA helicase.; [PTHR10887] DNA2/NAM7 HELICASE FAMILY; [PF13086] AAA domain; [PF13087] AAA domain68.990.4716
20 Mapoly0006s0294 [PF04520] Senescence regulator70.200.4549
21 Mapoly0044s0079 [PF01501] Glycosyl transferase family 8; [PTHR13778] GLYCOSYLTRANSFERASE 8 DOMAIN-CONTAINING PROTEIN; [PTHR13778:SF1] SUBFAMILY NOT NAMED; [GO:0016757] transferase activity, transferring glycosyl groups70.480.4322
22 Mapoly0093s0083 [KOG0254] Predicted transporter (major facilitator superfamily); [PF00083] Sugar (and other) transporter; [GO:0016021] integral to membrane; [GO:0055085] transmembrane transport; [GO:0022857] transmembrane transporter activity; [PTHR24063] FAMILY NOT NAMED73.210.4666
23 Mapoly0088s0022 [PF03168] Late embryogenesis abundant protein; [PTHR31852] FAMILY NOT NAMED73.610.4691
24 Mapoly0031s0082 [PTHR12302] EBNA2 BINDING PROTEIN P100; [PF00565] Staphylococcal nuclease homologue; [KOG2039] Transcriptional coactivator p100; [PF00567] Tudor domain; [GO:0016788] hydrolase activity, acting on ester bonds; [GO:0003676] nucleic acid binding78.000.4533
25 Mapoly0008s0029 [K09422] myb proto-oncogene protein, plant; [KOG0048] Transcription factor, Myb superfamily; [PTHR10641] MYB-LIKE DNA-BINDING PROTEIN MYB; [PF13921] Myb-like DNA-binding domain78.420.4563
26 Mapoly0172s0014 [PF00569] Zinc finger, ZZ type; [GO:0008270] zinc ion binding80.800.4386
27 Mapoly0070s0009 [PTHR11624] DEHYDROGENASE RELATED; [K01662] 1-deoxy-D-xylulose-5-phosphate synthase [EC:2.2.1.7]; [GO:0008661] 1-deoxy-D-xylulose-5-phosphate synthase activity; [GO:0008152] metabolic process; [PF02779] Transketolase, pyrimidine binding domain; [GO:0003824] catalytic activity; [2.2.1.7] 1-deoxy-D-xylulose-5-phosphate synthase.; [PF13292] 1-deoxy-D-xylulose-5-phosphate synthase; [PF02780] Transketolase, C-terminal domain; [GO:0016114] terpenoid biosynthetic process; [KOG0523] Transketolase87.460.4365
28 Mapoly0004s0143 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain89.600.4746
29 Mapoly0052s0089 [PF13418] Galactose oxidase, central domain; [PTHR23244] KELCH REPEAT DOMAIN; [PF13415] Galactose oxidase, central domain; [KOG4693] Uncharacterized conserved protein, contains kelch repeat90.640.4348
30 Mapoly0008s0147 [PF08238] Sel1 repeat; [PTHR12298] PCDC2 (PROGRAMMED CELL DEATH PROTEIN 2)-RELATED; [PF01753] MYND finger93.080.4310
31 Mapoly0206s0010 [K00025] malate dehydrogenase [EC:1.1.1.37]; [PF00056] lactate/malate dehydrogenase, NAD binding domain; [GO:0055114] oxidation-reduction process; [KOG1496] Malate dehydrogenase; [PTHR23382] MALATE DEHYDROGENASE; [PF02866] lactate/malate dehydrogenase, alpha/beta C-terminal domain; [GO:0016491] oxidoreductase activity; [GO:0016616] oxidoreductase activity, acting on the CH-OH group of donors, NAD or NADP as acceptor; [1.1.1.37] Malate dehydrogenase.; [GO:0006108] malate metabolic process; [GO:0016615] malate dehydrogenase activity95.990.4771
32 Mapoly0043s0039 [GO:0005524] ATP binding; [PTHR23069] TAT-BINDING HOMOLOG 7; [KOG0737] AAA+-type ATPase; [PF00004] ATPase family associated with various cellular activities (AAA); [PF13771] PHD-like zinc-binding domain97.440.4816
33 Mapoly0035s0062 [PTHR23125:SF17] GRR1-RELATED, ARATH; [PF13516] Leucine Rich repeat; [K14485] transport inhibitor response 1; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN; [KOG1947] Leucine rich repeat proteins, some proteins contain F-box106.190.4237
34 Mapoly0067s0001 -112.470.3530
35 Mapoly0012s0184 [KOG1454] Predicted hydrolase/acyltransferase (alpha/beta hydrolase superfamily); [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family113.370.4605
36 Mapoly0036s0149 [KOG2132] Uncharacterized conserved protein, contains JmjC domain; [PTHR12461] HYPOXIA-INDUCIBLE FACTOR 1 ALPHA INHIBITOR-RELATED; [PF13621] Cupin-like domain113.700.4216
37 Mapoly0116s0006 [PF00651] BTB/POZ domain; [PF07707] BTB And C-terminal Kelch; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN115.490.4612
38 Mapoly0064s0076 -121.290.4659
39 Mapoly0161s0004 [K01376] cathepsin V [EC:3.4.22.43]; [GO:0008234] cysteine-type peptidase activity; [PF00396] Granulin; [3.4.22.-] Cysteine endopeptidases.; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [KOG1543] Cysteine proteinase Cathepsin L; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis121.450.4384
40 Mapoly0040s0038 [GO:0016758] transferase activity, transferring hexosyl groups; [K13496] UDP-glucosyl transferase 73C [EC:2.4.1.-]; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [2.4.1.-] Hexosyltransferases.; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase123.030.4434
41 Mapoly0068s0096 [PTHR23083] TETRATRICOPEPTIDE REPEAT PROTEIN, TPR125.670.4104
42 Mapoly0181s0015 [GO:0016020] membrane; [K10084] ER degradation enhancer, mannosidase alpha-like 1; [PTHR11742] MANNOSYL-OLIGOSACCHARIDE ALPHA-1,2-MANNOSIDASE-RELATED; [GO:0004571] mannosyl-oligosaccharide 1,2-alpha-mannosidase activity; [GO:0005509] calcium ion binding; [PF01532] Glycosyl hydrolase family 47; [KOG2429] Glycosyl hydrolase, family 47128.150.4401
43 Mapoly0069s0005 [PF11919] Domain of unknown function (DUF3437); [KOG1851] Uncharacterized conserved protein; [K06699] proteasome activator subunit 4; [PTHR32170] FAMILY NOT NAMED132.950.4639
44 Mapoly0015s0135 -135.810.3678
45 Mapoly0042s0068 [GO:0004659] prenyltransferase activity; [K09833] homogenitisate phytyltransferase; [GO:0016021] integral to membrane; [PTHR11048:SF1] BACTERIOCHLOROPHYLL SYNTHASE; [PTHR11048] PRENYLTRANSFERASES; [PF01040] UbiA prenyltransferase family141.360.4050
46 Mapoly0011s0161 [GO:0003677] DNA binding; [PTHR11945] MADS BOX PROTEIN; [GO:0006355] regulation of transcription, DNA-dependent; [GO:0046983] protein dimerization activity; [PF01486] K-box region; [GO:0003700] sequence-specific DNA binding transcription factor activity; [KOG0014] MADS box transcription factor; [K09264] MADS-box transcription factor, plant; [GO:0005634] nucleus; [PF00319] SRF-type transcription factor (DNA-binding and dimerisation domain)146.570.3864
47 Mapoly0066s0066 -150.740.4509
48 Mapoly0004s0045 -154.500.4538
49 Mapoly0008s0182 [3.1.2.15] Ubiquitin thiolesterase.; [K11851] ubiquitin carboxyl-terminal hydrolase 30 [EC:3.1.2.15]; [PF00443] Ubiquitin carboxyl-terminal hydrolase; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR24006] FAMILY NOT NAMED156.000.4353
50 Mapoly0161s0032 [PTHR18895] METHYLTRANSFERASE; [PF06325] Ribosomal protein L11 methyltransferase (PrmA); [GO:0005737] cytoplasm; [GO:0006479] protein methylation; [GO:0008276] protein methyltransferase activity; [PTHR18895:SF3] RIBOSOMAL PROTEIN L11 METHYLTRANSFERASE (L11 MTASE)156.170.4203
Showing 1 to 50 of 200 records
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