Guide Gene

Gene ID
Mapoly0013s0130
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF11221] Subunit 21 of Mediator complex; [PTHR13381] RNA POLYMERASE II HOLOENZYME COMPONENT SRB7; [KOG1510] RNA polymerase II holoenzyme and mediator subcomplex, subunit SURB7/SRB7

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0013s0130 [PF11221] Subunit 21 of Mediator complex; [PTHR13381] RNA POLYMERASE II HOLOENZYME COMPONENT SRB7; [KOG1510] RNA polymerase II holoenzyme and mediator subcomplex, subunit SURB7/SRB7 0.00 1.0000
1 Mapoly0005s0172 [PTHR24322] FAMILY NOT NAMED; [K04708] 3-dehydrosphinganine reductase [EC:1.1.1.102]; [KOG1210] Predicted 3-ketosphinganine reductase; [1.1.1.102] 3-dehydrosphinganine reductase.; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase2.830.7494
2 Mapoly0001s0441 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein4.800.7870
3 Mapoly0022s0103 [KOG4054] Uncharacterized conserved protein; [PTHR20955] UNCHARACTERIZED; [GO:0005789] endoplasmic reticulum membrane; [PF07086] Protein of unknown function (DUF1352); [GO:0007029] endoplasmic reticulum organization5.660.7363
4 Mapoly0127s0049 [K04649] ubiquitin-conjugating enzyme (huntingtin interacting protein 2) [EC:6.3.2.19]; [GO:0005515] protein binding; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0418] Ubiquitin-protein ligase; [PF00627] UBA/TS-N domain; [PTHR24067:SF29] UBIQUITIN-CONJUGATING ENZYME E2 K; [PF00179] Ubiquitin-conjugating enzyme6.710.7445
5 Mapoly0015s0174 [KOG4559] Uncharacterized conserved protein; [PF10046] Biogenesis of lysosome-related organelles complex-1 subunit 27.140.7560
6 Mapoly0044s0131 [PF12937] F-box-like; [GO:0005515] protein binding; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN7.210.7087
7 Mapoly0001s0452 [KOG0798] Uncharacterized conserved protein; [PTHR13395:SF6] SUBFAMILY NOT NAMED; [PF09724] Uncharacterized conserved protein (DUF2036); [K11271] sister chromatid cohesion protein DCC1; [PTHR13395] SISTER CHROMATID COHESION PROTEIN DCC1-RELATED7.480.7208
8 Mapoly0013s0171 [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [PF03661] Uncharacterised protein family (UPF0121); [GO:0016021] integral to membrane10.390.7401
9 Mapoly0025s0126 [KOG4764] Uncharacterized conserved protein; [PF05160] DSS1/SEM1 family; [PTHR16771:SF0] SUBFAMILY NOT NAMED; [PTHR16771] 26 PROTEASOME COMPLEX SUBUNIT DSS111.920.7860
10 Mapoly0073s0092 [PF13664] Domain of unknown function (DUF4149); [PTHR23241] LATE EMBRYOGENESIS ABUNDANT (PLANTS) LEA-RELATED; [KOG2886] Uncharacterized conserved protein14.730.7365
11 Mapoly0008s0153 [K04554] ubiquitin-conjugating enzyme E2 J2 [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0894] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme; [PTHR24067:SF42] UBIQUITIN-CONJUGATING ENZYME E2 J215.870.7266
12 Mapoly0058s0033 [PTHR20383] FAMILY NOT NAMED; [KOG2424] Protein involved in transcription start site selection; [GO:0004721] phosphoprotein phosphatase activity; [GO:0006397] mRNA processing; [GO:0005634] nucleus; [PF04722] Ssu72-like protein16.700.7359
13 Mapoly0191s0007 [2.1.1.77] Protein-L-isoaspartate(D-aspartate) O-methyltransferase.; [GO:0004719] protein-L-isoaspartate (D-aspartate) O-methyltransferase activity; [KOG1661] Protein-L-isoaspartate(D-aspartate) O-methyltransferase; [PF01135] Protein-L-isoaspartate(D-aspartate) O-methyltransferase (PCMT); [K00573] protein-L-isoaspartate(D-aspartate) O-methyltransferase [EC:2.1.1.77]; [PTHR11579] PROTEIN-L-ISOASPARTATE O-METHYLTRANSFERASE; [GO:0006464] cellular protein modification process16.700.7033
14 Mapoly0071s0036 [GO:0005515] protein binding; [PTHR13833] FAMILY NOT NAMED; [PF01436] NHL repeat25.920.7132
15 Mapoly0025s0134 [GO:0005737] cytoplasm; [K08336] autophagy-related protein 12; [KOG3439] Protein conjugation factor involved in autophagy; [PTHR13385] AUTOPHAGY PROTEIN 12; [GO:0000045] autophagic vacuole assembly; [PF04110] Ubiquitin-like autophagy protein Apg1227.060.6698
16 Mapoly0216s0002 -28.570.6999
17 Mapoly0109s0026 [GO:0005515] protein binding; [KOG1446] Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; [PTHR19861] WD40 REPEAT PROTEIN SWD2; [PF00400] WD domain, G-beta repeat29.500.7065
18 Mapoly0161s0021 [K11805] WD repeat-containing protein 68; [GO:0005515] protein binding; [KOG0290] Conserved WD40 repeat-containing protein AN11; [PTHR19919] WD REPEAT CONTAINING PROTEIN; [PF00400] WD domain, G-beta repeat29.700.7181
19 Mapoly0008s0204 [PF00364] Biotin-requiring enzyme; [PTHR18866] CARBOXYLASE:PYRUVATE/ACETYL-COA/PROPIONYL-COA CARBOXYLASE30.170.6642
20 Mapoly0027s0107 -31.020.6958
21 Mapoly0033s0143 [K03127] transcription initiation factor TFIID subunit 13; [KOG3901] Transcription initiation factor IID subunit; [PF02269] Transcription initiation factor IID, 18kD subunit; [GO:0006366] transcription from RNA polymerase II promoter; [PTHR11380] TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED31.460.7147
22 Mapoly0003s0300 [KOG1515] Arylacetamide deacetylase; [GO:0016787] hydrolase activity; [GO:0008152] metabolic process; [PF07859] alpha/beta hydrolase fold; [PTHR23024] MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES31.940.7200
23 Mapoly0014s0137 [GO:0005783] endoplasmic reticulum; [GO:0016021] integral to membrane; [PTHR12701] BCR-ASSOCIATED PROTEIN, BAP; [GO:0006886] intracellular protein transport32.860.7148
24 Mapoly0024s0071 -33.500.7001
25 Mapoly0025s0057 [PTHR10907] REGUCALCIN; [PF08450] SMP-30/Gluconolaconase/LRE-like region; [KOG4499] Ca2+-binding protein Regucalcin/SMP3033.760.7163
26 Mapoly0031s0103 -36.180.6550
27 Mapoly0075s0085 -36.370.7077
28 Mapoly0029s0061 [GO:0016020] membrane; [PF01956] Integral membrane protein DUF106; [PTHR13116] UNCHARACTERIZED; [KOG3188] Uncharacterized conserved protein37.110.7186
29 Mapoly0035s0029 [PF10602] 26S proteasome subunit RPN7; [KOG0686] COP9 signalosome, subunit CSN1; [GO:0005515] protein binding; [PTHR14145] 26S PROTESOME SUBUNIT 6; [PTHR14145:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 1; [PF01399] PCI domain; [K12175] COP9 signalosome complex subunit 137.750.7125
30 Mapoly0093s0011 -40.120.6604
31 Mapoly0051s0111 [PTHR10907] REGUCALCIN; [PF08450] SMP-30/Gluconolaconase/LRE-like region40.300.7068
32 Mapoly0214s0013 [PF00933] Glycosyl hydrolase family 3 N terminal domain; [GO:0004553] hydrolase activity, hydrolyzing O-glycosyl compounds; [GO:0005975] carbohydrate metabolic process; [PTHR30620] PERIPLASMIC BETA-GLUCOSIDASE-RELATED; [PF01915] Glycosyl hydrolase family 3 C-terminal domain41.180.6373
33 Mapoly0033s0019 [PTHR13903] PIRIN-RELATED; [K06911] MFS transporter, UMF1 family; [PF02678] Pirin; [PF05726] Pirin C-terminal cupin domain41.350.6955
34 Mapoly0024s0049 -41.410.6970
35 Mapoly0038s0031 [GO:0005874] microtubule; [PF02970] Tubulin binding cofactor A; [GO:0007021] tubulin complex assembly; [PTHR21500] TUBULIN-SPECIFIC CHAPERONE A; [KOG3470] Beta-tubulin folding cofactor A; [PTHR21500:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding41.570.7003
36 Mapoly0030s0099 [GO:0055114] oxidation-reduction process; [KOG2456] Aldehyde dehydrogenase; [1.2.1.3] Aldehyde dehydrogenase (NAD(+)).; [K00128] aldehyde dehydrogenase (NAD+) [EC:1.2.1.3]; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PTHR11699] ALDEHYDE DEHYDROGENASE-RELATED; [PTHR11699:SF15] ALDEHYDE DEHYDROGENASE; [PF00171] Aldehyde dehydrogenase family42.050.6776
37 Mapoly0170s0031 -42.740.6661
38 Mapoly0004s0020 [PTHR13180] SMALL MEMBRANE PROTEIN-RELATED; [KOG3393] Predicted membrane protein; [PF05255] Uncharacterised protein family (UPF0220)44.500.7061
39 Mapoly0105s0029 [PTHR22903] PLEKHH PROTEIN; [PF00169] PH domain46.130.6558
40 Mapoly0076s0002 [PTHR14854] NIF3L1BP1 PROTEIN-RELATED; [KOG3215] Uncharacterized conserved protein; [GO:0000445] THO complex part of transcription export complex; [GO:0006397] mRNA processing; [K13176] THO complex subunit 7; [PF05615] Tho complex subunit 746.170.6941
41 Mapoly0004s0084 [GO:0015035] protein disulfide oxidoreductase activity; [KOG1752] Glutaredoxin and related proteins; [PTHR10168] GLUTAREDOXIN; [GO:0045454] cell redox homeostasis; [PF00462] Glutaredoxin; [GO:0009055] electron carrier activity; [K03676] glutaredoxin 346.370.7353
42 Mapoly0001s0456 [KOG3473] RNA polymerase II transcription elongation factor Elongin/SIII, subunit elongin C; [K03872] transcription elongation factor B, polypeptide 1; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR20648] FAMILY NOT NAMED; [PF03931] Skp1 family, tetramerisation domain46.450.7236
43 Mapoly0082s0086 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [K07953] GTP-binding protein SAR1 [EC:3.6.5.-]; [3.6.5.-] Acting on GTP; involved in cellular and subcellular movement.; [PF00025] ADP-ribosylation factor family; [KOG0077] Vesicle coat complex COPII, GTPase subunit SAR1; [GO:0005622] intracellular; [GO:0006886] intracellular protein transport; [PTHR11711:SF12] GTP-BINDING PROTEIN SAR1; [GO:0005525] GTP binding46.500.6883
44 Mapoly0039s0012 [PTHR16007] EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED; [PF04819] Family of unknown function (DUF716)48.370.6255
45 Mapoly0092s0014 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain50.200.6939
46 Mapoly0066s0045 [PF05773] RWD domain; [PTHR21275] UNCHARACTERIZED; [GO:0005515] protein binding; [KOG4018] Uncharacterized conserved protein, contains RWD domain50.610.5985
47 Mapoly0039s0015 [PF06417] Protein of unknown function (DUF1077); [PTHR19315:SF9] SUBFAMILY NOT NAMED; [PTHR19315] FAMILY NOT NAMED; [KOG3318] Predicted membrane protein51.300.6882
48 Mapoly0081s0075 [PF06749] Protein of unknown function (DUF1218); [PTHR31769] FAMILY NOT NAMED54.900.7329
49 Mapoly0058s0101 -57.580.6783
50 Mapoly0037s0101 [PTHR31126:SF0] SUBFAMILY NOT NAMED; [PF03162] Tyrosine phosphatase family; [PTHR31126] FAMILY NOT NAMED58.100.7187
Showing 1 to 50 of 200 records
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