Guide Gene

Gene ID
Mapoly0066s0045
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF05773] RWD domain; [PTHR21275] UNCHARACTERIZED; [GO:0005515] protein binding; [KOG4018] Uncharacterized conserved protein, contains RWD domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0066s0045 [PF05773] RWD domain; [PTHR21275] UNCHARACTERIZED; [GO:0005515] protein binding; [KOG4018] Uncharacterized conserved protein, contains RWD domain 0.00 1.0000
1 Mapoly0002s0343 [KOG3448] Predicted snRNP core protein; [GO:0006397] mRNA processing; [PTHR13829] SNRNP CORE PROTEIN FAMILY MEMBER; [K12621] U6 snRNA-associated Sm-like protein LSm2; [PF01423] LSM domain1.410.7045
2 Mapoly0005s0172 [PTHR24322] FAMILY NOT NAMED; [K04708] 3-dehydrosphinganine reductase [EC:1.1.1.102]; [KOG1210] Predicted 3-ketosphinganine reductase; [1.1.1.102] 3-dehydrosphinganine reductase.; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase3.460.6853
3 Mapoly0039s0015 [PF06417] Protein of unknown function (DUF1077); [PTHR19315:SF9] SUBFAMILY NOT NAMED; [PTHR19315] FAMILY NOT NAMED; [KOG3318] Predicted membrane protein6.080.7089
4 Mapoly0029s0143 -6.710.6069
5 Mapoly0025s0134 [GO:0005737] cytoplasm; [K08336] autophagy-related protein 12; [KOG3439] Protein conjugation factor involved in autophagy; [PTHR13385] AUTOPHAGY PROTEIN 12; [GO:0000045] autophagic vacuole assembly; [PF04110] Ubiquitin-like autophagy protein Apg127.750.6670
6 Mapoly0001s0439 -8.490.6025
7 Mapoly0063s0096 -9.220.6576
8 Mapoly0031s0077 -9.800.5818
9 Mapoly0015s0116 [PTHR15858] UNCHARACTERIZED; [PTHR15858:SF0] SUBFAMILY NOT NAMED; [PF08571] Yos1-like; [KOG4779] Predicted membrane protein14.000.6354
10 Mapoly0093s0047 [PF01239] Protein prenyltransferase alpha subunit repeat; [2.5.1.58] Protein farnesyltransferase.; [GO:0008318] protein prenyltransferase activity; [GO:0018342] protein prenylation; [2.5.1.59] Protein geranylgeranyltransferase type I.; [K05955] protein farnesyltransferase/geranylgeranyltransferase type-1 subunit alpha [EC:2.5.1.58 2.5.1.59]; [PTHR11129] PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT/RAB GERANYLGERANYL TRANSFERASE ALPHA SUBUNIT; [KOG0530] Protein farnesyltransferase, alpha subunit/protein geranylgeranyltransferase type I, alpha subunit; [PTHR11129:SF1] PROTEIN FARNESYLTRANSFERASE ALPHA SUBUNIT16.000.6088
11 Mapoly0004s0026 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain18.970.5870
12 Mapoly0029s0150 [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0417] Ubiquitin-protein ligase; [K10689] peroxin-4 [EC:6.3.2.19]; [PTHR24067:SF56] UBIQUITIN CARRIER PROTEIN; [PF00179] Ubiquitin-conjugating enzyme25.040.6025
13 Mapoly0030s0048 [PTHR24320] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [KOG1208] Dehydrogenases with different specificities (related to short-chain alcohol dehydrogenases); [PF00106] short chain dehydrogenase32.400.5592
14 Mapoly0033s0142 -35.240.6465
15 Mapoly0014s0199 [PF10280] Mediator complex protein; [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR22890] UNCHARACTERIZED; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity37.040.5935
16 Mapoly0061s0007 [PTHR24322] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase; [PTHR24322:SF31] 3-PHENYLPROPIONATE-DIHYDRODIOL/CINNAMIC ACID-DIHYDRODIOL DEHYDROGENASE; [KOG1205] Predicted dehydrogenase43.240.5757
17 Mapoly0062s0037 [PF09764] N-terminal glutamine amidase; [KOG3261] Uncharacterized conserved protein; [PTHR13035] UNCHARACTERIZED; [PTHR13035:SF0] SUBFAMILY NOT NAMED; [GO:0016811] hydrolase activity, acting on carbon-nitrogen (but not peptide) bonds, in linear amides43.310.5629
18 Mapoly0013s0171 [PTHR30603] RNA POLYMERASE SIGMA FACTOR RPO; [PF03661] Uncharacterised protein family (UPF0121); [GO:0016021] integral to membrane45.170.6038
19 Mapoly0075s0049 -45.910.5806
20 Mapoly0039s0012 [PTHR16007] EPIDIDYMAL MEMBRANE PROTEIN E9-RELATED; [PF04819] Family of unknown function (DUF716)48.760.5619
21 Mapoly0085s0093 [PF09335] SNARE associated Golgi protein49.750.5035
22 Mapoly0002s0185 [GO:0046836] glycolipid transport; [PF08718] Glycolipid transfer protein (GLTP); [GO:0005737] cytoplasm; [PTHR10219] GLYCOLIPID TRANSFER PROTEIN-RELATED; [GO:0051861] glycolipid binding; [KOG4189] Uncharacterized conserved protein; [GO:0017089] glycolipid transporter activity49.780.5763
23 Mapoly0013s0130 [PF11221] Subunit 21 of Mediator complex; [PTHR13381] RNA POLYMERASE II HOLOENZYME COMPONENT SRB7; [KOG1510] RNA polymerase II holoenzyme and mediator subcomplex, subunit SURB7/SRB750.610.5985
24 Mapoly0066s0061 -57.830.4639
25 Mapoly0002s0139 [PTHR23338:SF16] U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM4; [K12623] U6 snRNA-associated Sm-like protein LSm4; [KOG3293] Small nuclear ribonucleoprotein (snRNP); [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain58.030.5557
26 Mapoly0074s0078 [PF13459] 4Fe-4S single cluster domain; [PF00226] DnaJ domain; [PTHR24076] FAMILY NOT NAMED58.740.5373
27 Mapoly0001s0183 [PF03006] Haemolysin-III related; [GO:0016021] integral to membrane; [PTHR20855] ADIPOR/PROGESTIN RECEPTOR-RELATED; [KOG0748] Predicted membrane proteins, contain hemolysin III domain62.160.5106
28 Mapoly0049s0051 [PF02825] WWE domain62.630.5181
29 Mapoly0060s0094 -63.380.5008
30 Mapoly0060s0011 [GO:0034314] Arp2/3 complex-mediated actin nucleation; [KOG1876] Actin-related protein Arp2/3 complex, subunit ARPC4; [GO:0030041] actin filament polymerization; [GO:0005856] cytoskeleton; [GO:0005885] Arp2/3 protein complex; [PTHR22629] ARP2/3 COMPLEX 20 KD SUBUNIT; [PF05856] ARP2/3 complex 20 kDa subunit (ARPC4); [K05755] actin related protein 2/3 complex, subunit 464.500.5532
31 Mapoly0073s0093 -64.710.5350
32 Mapoly0121s0035 [PF10172] Det1 complexing ubiquitin ligase; [GO:0003676] nucleic acid binding; [PF02037] SAP domain69.570.5496
33 Mapoly0002s0104 [PF04051] Transport protein particle (TRAPP) component; [PTHR12817] TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 6B; [KOG3316] Transport protein particle (TRAPP) complex subunit71.130.4983
34 Mapoly0059s0090 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein74.610.5790
35 Mapoly0024s0049 -77.610.5664
36 Mapoly0022s0103 [KOG4054] Uncharacterized conserved protein; [PTHR20955] UNCHARACTERIZED; [GO:0005789] endoplasmic reticulum membrane; [PF07086] Protein of unknown function (DUF1352); [GO:0007029] endoplasmic reticulum organization78.580.5658
37 Mapoly0103s0022 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN78.840.5513
38 Mapoly0036s0156 [PTHR15857] COMM DOMAIN CONTAINING PROTEIN 2; [PF07258] HCaRG protein78.890.5382
39 Mapoly0042s0050 [PF05486] Signal recognition particle 9 kDa protein (SRP9); [GO:0048500] signal recognition particle; [GO:0045900] negative regulation of translational elongation; [GO:0008312] 7S RNA binding; [K03109] signal recognition particle subunit SRP9; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR12834] SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN; [KOG3465] Signal recognition particle, subunit Srp980.680.5757
40 Mapoly0073s0092 [PF13664] Domain of unknown function (DUF4149); [PTHR23241] LATE EMBRYOGENESIS ABUNDANT (PLANTS) LEA-RELATED; [KOG2886] Uncharacterized conserved protein81.610.5765
41 Mapoly0128s0008 [GO:0016787] hydrolase activity; [PTHR31835] FAMILY NOT NAMED; [PF00293] NUDIX domain83.240.4669
42 Mapoly0029s0061 [GO:0016020] membrane; [PF01956] Integral membrane protein DUF106; [PTHR13116] UNCHARACTERIZED; [KOG3188] Uncharacterized conserved protein83.250.5803
43 Mapoly0001s0316 [GO:0006506] GPI anchor biosynthetic process; [GO:0016021] integral to membrane; [PTHR13121] GPI TRANSAMIDASE COMPONENT PIG-U; [KOG2552] Major facilitator superfamily permease - Cdc91p; [PF06728] GPI transamidase subunit PIG-U85.440.4776
44 Mapoly0002s0003 -87.750.5560
45 Mapoly0012s0161 [GO:0000139] Golgi membrane; [GO:0016021] integral to membrane; [PTHR10231] NUCLEOTIDE-SUGAR TRANSMEMBRANE TRANSPORTER; [GO:0005351] sugar:hydrogen symporter activity; [GO:0008643] carbohydrate transport; [KOG2234] Predicted UDP-galactose transporter; [PF04142] Nucleotide-sugar transporter88.620.5233
46 Mapoly0061s0117 -89.920.5578
47 Mapoly0197s0015 -96.000.5045
48 Mapoly0023s0018 -97.240.5405
49 Mapoly0130s0031 [GO:0005801] cis-Golgi network; [PF04099] Sybindin-like family; [KOG3368] Transport protein particle (TRAPP) complex subunit; [PTHR23249] SYNBINDIN; [GO:0006888] ER to Golgi vesicle-mediated transport97.400.5269
50 Mapoly0114s0003 [PTHR13379] UNCHARACTERIZED DUF1308; [PF07000] Protein of unknown function (DUF1308); [KOG4529] Uncharacterized conserved protein100.020.5088
Showing 1 to 50 of 200 records
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