Guide Gene

Gene ID
Mapoly0025s0044
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR23042:SF19] SUBFAMILY NOT NAMED; [PTHR23042] CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0025s0044 [PF00010] Helix-loop-helix DNA-binding domain; [GO:0046983] protein dimerization activity; [PTHR23042:SF19] SUBFAMILY NOT NAMED; [PTHR23042] CIRCADIAN PROTEIN CLOCK/ARNT/BMAL/PAS 0.00 1.0000
1 Mapoly0036s0013 -7.480.5709
2 Mapoly0022s0035 [GO:0009072] aromatic amino acid family metabolic process; [PTHR11820:SF1] FUMARYLACETOACETATE HYDROLASE; [PF09298] Fumarylacetoacetase N-terminal; [GO:0004334] fumarylacetoacetase activity; [3.7.1.2] Fumarylacetoacetase.; [PTHR11820] FUMARYLACETOACETATE HYDROLASE; [K01555] fumarylacetoacetase [EC:3.7.1.2]; [KOG2843] Fumarylacetoacetase; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PF01557] Fumarylacetoacetate (FAA) hydrolase family17.260.6077
3 Mapoly0076s0059 -22.320.6023
4 Mapoly0073s0011 [PF04525] Tubby C 2; [PTHR31087] FAMILY NOT NAMED24.080.5915
5 Mapoly0008s0153 [K04554] ubiquitin-conjugating enzyme E2 J2 [EC:6.3.2.19]; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0894] Ubiquitin-protein ligase; [PF00179] Ubiquitin-conjugating enzyme; [PTHR24067:SF42] UBIQUITIN-CONJUGATING ENZYME E2 J226.500.5930
6 Mapoly0079s0012 -27.500.5141
7 Mapoly0026s0025 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting27.930.5317
8 Mapoly0068s0087 [GO:0016020] membrane; [PF00504] Chlorophyll A-B binding protein; [PTHR21649] CHLOROPHYLL A/B BINDING PROTEIN; [GO:0009765] photosynthesis, light harvesting27.960.5274
9 Mapoly0050s0080 -28.770.5680
10 Mapoly0079s0008 [1.7.3.3] Factor independent urate hydroxylase.; [KOG1599] Uricase (urate oxidase); [K00365] urate oxidase [EC:1.7.3.3]; [PF01014] Uricase; [PTHR10395] URICASE AND TRANSTHYRETIN-RELATED30.590.5637
11 Mapoly0075s0085 -39.620.5832
12 Mapoly0008s0131 [GO:0016758] transferase activity, transferring hexosyl groups; [PF00201] UDP-glucoronosyl and UDP-glucosyl transferase; [PTHR11926] GLUCOSYL/GLUCURONOSYL TRANSFERASES; [GO:0008152] metabolic process; [KOG1192] UDP-glucuronosyl and UDP-glucosyl transferase45.390.5672
13 Mapoly0140s0022 -45.560.5763
14 Mapoly0177s0001 [GO:0016020] membrane; [KOG1286] Amino acid transporters; [GO:0003333] amino acid transmembrane transport; [PF13906] C-terminus of AA_permease; [PF13520] Amino acid permease; [PTHR11785] AMINO ACID TRANSPORTER; [GO:0015171] amino acid transmembrane transporter activity47.400.5415
15 Mapoly0077s0057 [PF03006] Haemolysin-III related; [GO:0016021] integral to membrane; [PTHR20855] ADIPOR/PROGESTIN RECEPTOR-RELATED; [KOG0748] Predicted membrane proteins, contain hemolysin III domain49.080.5643
16 Mapoly0174s0010 [KOG1515] Arylacetamide deacetylase; [PTHR23024:SF43] LIPASE, PUTATIVE ESTERASE; [GO:0016787] hydrolase activity; [GO:0008152] metabolic process; [PF07859] alpha/beta hydrolase fold; [PTHR23024] MEMBER OF 'GDXG' FAMILY OF LIPOLYTIC ENZYMES54.960.5426
17 Mapoly0043s0052 [PF12937] F-box-like; [K14495] F-box protein GID2; [GO:0005515] protein binding55.180.5379
18 Mapoly0012s0029 [PTHR10891:SF372] SUBFAMILY NOT NAMED; [KOG0028] Ca2+-binding protein (centrin/caltractin), EF-Hand superfamily protein; [PTHR10891] EF-HAND CALCIUM-BINDING DOMAIN CONTAINING PROTEIN; [PF13499] EF-hand domain pair; [GO:0005509] calcium ion binding55.930.5697
19 Mapoly0085s0024 [PF07173] Protein of unknown function (DUF1399)63.390.5222
20 Mapoly0020s0028 [PTHR21466] FAMILY NOT NAMED65.180.5337
21 Mapoly0058s0107 [PF02746] Mandelate racemase / muconate lactonizing enzyme, N-terminal domain; [PTHR13794] ENOLASE SUPERFAMILY, MANDELATE RACEMASE; [PF13378] Enolase C-terminal domain-like; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [PTHR13794:SF13] MUCONATE CYCLOISOMERASE65.450.4887
22 Mapoly0059s0002 [GO:0016020] membrane; [PTHR19139] AQUAPORIN TRANSPORTER; [GO:0006810] transport; [KOG0223] Aquaporin (major intrinsic protein family); [GO:0005215] transporter activity; [PF00230] Major intrinsic protein67.170.5359
23 Mapoly0041s0062 -68.030.5636
24 Mapoly0032s0088 [PF13450] NAD(P)-binding Rossmann-like domain; [GO:0055114] oxidation-reduction process; [PTHR15944] FAMILY NOT NAMED; [GO:0016670] oxidoreductase activity, acting on a sulfur group of donors, oxygen as acceptor; [1.8.3.5] Prenylcysteine oxidase.; [PF07156] Prenylcysteine lyase; [GO:0030328] prenylcysteine catabolic process; [K05906] prenylcysteine oxidase [EC:1.8.3.5]70.430.5497
25 Mapoly0148s0017 [KOG0143] Iron/ascorbate family oxidoreductases; [GO:0055114] oxidation-reduction process; [PF14226] non-haem dioxygenase in morphine synthesis N-terminal; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [PTHR10209] OXIDOREDUCTASE, 2OG-FE(II) OXYGENASE FAMILY PROTEIN; [GO:0016491] oxidoreductase activity; [K06892] ATP-dependent Clp protease adaptor protein ClpS; [PF03171] 2OG-Fe(II) oxygenase superfamily71.290.5628
26 Mapoly0037s0074 -74.740.5321
27 Mapoly0004s0228 [KOG3202] SNARE protein TLG1/Syntaxin 6; [GO:0005515] protein binding; [PTHR12380] SYNTAXIN; [K08503] syntaxin of plants SYP5; [PF05739] SNARE domain76.490.5426
28 Mapoly0044s0033 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [KOG1237] H+/oligopeptide symporter; [GO:0006810] transport; [GO:0005215] transporter activity76.920.5343
29 Mapoly0037s0085 -78.990.5396
30 Mapoly0076s0058 -84.400.5460
31 Mapoly0024s0001 [PTHR32133] FAMILY NOT NAMED85.990.5202
32 Mapoly0098s0044 [PF00249] Myb-like DNA-binding domain; [PTHR31499] FAMILY NOT NAMED; [GO:0003682] chromatin binding; [PF14379] MYB-CC type transfactor, LHEQLE motif86.990.5407
33 Mapoly0037s0066 [PTHR12771] ENGULFMENT AND CELL MOTILITY; [GO:0006909] phagocytosis; [GO:0005856] cytoskeleton; [PF04727] ELMO/CED-12 family87.590.4791
34 Mapoly0021s0163 -88.740.5393
35 Mapoly0061s0007 [PTHR24322] FAMILY NOT NAMED; [GO:0016491] oxidoreductase activity; [GO:0008152] metabolic process; [PF00106] short chain dehydrogenase; [PTHR24322:SF31] 3-PHENYLPROPIONATE-DIHYDRODIOL/CINNAMIC ACID-DIHYDRODIOL DEHYDROGENASE; [KOG1205] Predicted dehydrogenase89.500.5275
36 Mapoly0161s0021 [K11805] WD repeat-containing protein 68; [GO:0005515] protein binding; [KOG0290] Conserved WD40 repeat-containing protein AN11; [PTHR19919] WD REPEAT CONTAINING PROTEIN; [PF00400] WD domain, G-beta repeat90.580.5557
37 Mapoly0118s0020 [KOG1493] Anaphase-promoting complex (APC), subunit 11; [PTHR14155] RING FINGER DOMAIN-CONTAINING; [GO:0005515] protein binding; [PF13639] Ring finger domain; [GO:0008270] zinc ion binding92.650.5169
38 Mapoly0031s0187 [GO:0005507] copper ion binding; [GO:0009055] electron carrier activity; [PF02298] Plastocyanin-like domain94.160.5393
39 Mapoly0118s0035 [PF07279] Protein of unknown function (DUF1442); [PTHR31096] FAMILY NOT NAMED96.120.5103
40 Mapoly0050s0130 [K00083] cinnamyl-alcohol dehydrogenase [EC:1.1.1.195]; [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [KOG0023] Alcohol dehydrogenase, class V; [1.1.1.195] Cinnamyl-alcohol dehydrogenase.; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED; [PTHR11695:SF261] ALCOHOL DEHYDROGENASE (ZN CONTAINING) (ADH-6)98.170.5151
41 Mapoly0020s0114 [GO:0003677] DNA binding; [PTHR10634] AN1-TYPE ZINC FINGER PROTEIN; [PF01428] AN1-like Zinc finger; [KOG3173] Predicted Zn-finger protein; [GO:0008270] zinc ion binding; [PF01754] A20-like zinc finger98.500.5289
42 Mapoly0047s0055 [KOG0039] Ferric reductase, NADH/NADPH oxidase and related proteins; [PF08022] FAD-binding domain; [GO:0055114] oxidation-reduction process; [PTHR11972] NADPH OXIDASE; [PF01794] Ferric reductase like transmembrane component; [GO:0016491] oxidoreductase activity; [PTHR11972:SF5] RESPIRATORY BURST OXIDASE; [PF08030] Ferric reductase NAD binding domain104.310.5038
43 Mapoly0122s0009 [KOG1542] Cysteine proteinase Cathepsin F; [GO:0008234] cysteine-type peptidase activity; [PF08246] Cathepsin propeptide inhibitor domain (I29); [PF00112] Papain family cysteine protease; [PTHR12411] CYSTEINE PROTEASE FAMILY C1-RELATED; [GO:0006508] proteolysis104.410.5397
44 Mapoly0011s0109 [GO:0005375] copper ion transmembrane transporter activity; [PTHR12483] SOLUTE CARRIER FAMILY 31 (COPPER TRANSPORTERS); [GO:0035434] copper ion transmembrane transport; [GO:0016021] integral to membrane; [PF04145] Ctr copper transporter family; [KOG3386] Copper transporter105.710.5323
45 Mapoly0152s0017 [GO:0006801] superoxide metabolic process; [PF00080] Copper/zinc superoxide dismutase (SODC); [GO:0055114] oxidation-reduction process; [PTHR10003] SUPEROXIDE DISMUTASE [CU-ZN]-RELATED; [KOG0441] Cu2+/Zn2+ superoxide dismutase SOD1; [GO:0046872] metal ion binding110.310.5280
46 Mapoly0040s0023 [PTHR24106] FAMILY NOT NAMED111.980.5425
47 Mapoly0061s0004 [PF14655] Rab3 GTPase-activating protein regulatory subunit N-terminus; [GO:0043087] regulation of GTPase activity; [PTHR12472] RAB3-GAP REGULATORY DOMAIN112.870.5114
48 Mapoly0004s0153 [KOG2913] Predicted membrane protein; [PTHR16201] FAMILY NOT NAMED; [PF04193] PQ loop repeat115.530.5240
49 Mapoly0059s0003 [GO:0016020] membrane; [PTHR19139] AQUAPORIN TRANSPORTER; [GO:0006810] transport; [KOG0223] Aquaporin (major intrinsic protein family); [GO:0005215] transporter activity; [PF00230] Major intrinsic protein117.430.5342
50 Mapoly0053s0067 -117.970.5387
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