Guide Gene

Gene ID
Mapoly0032s0098
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT; [1.14.11.2] Procollagen-proline dioxygenase.; [K00472] prolyl 4-hydroxylase [EC:1.14.11.2]; [PF03171] 2OG-Fe(II) oxygenase superfamily

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0032s0098 [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT; [1.14.11.2] Procollagen-proline dioxygenase.; [K00472] prolyl 4-hydroxylase [EC:1.14.11.2]; [PF03171] 2OG-Fe(II) oxygenase superfamily 0.00 1.0000
1 Mapoly0027s0107 -1.410.7831
2 Mapoly0207s0009 [PTHR10241] LETHAL(2) GIANT LARVAE PROTEIN; [GO:0016192] vesicle-mediated transport; [GO:0016021] integral to membrane; [PTHR10241:SF25] SUBFAMILY NOT NAMED; [PF00957] Synaptobrevin5.480.7489
3 Mapoly0009s0168 [PF00550] Phosphopantetheine attachment site; [PTHR20863] ACYL CARRIER PROTEIN/ZINC FINGER PROTEIN 593-RELATED13.340.7633
4 Mapoly0016s0188 [K10536] agmatine deiminase [EC:3.5.3.12]; [PTHR31377:SF0] SUBFAMILY NOT NAMED; [GO:0004668] protein-arginine deiminase activity; [3.5.3.12] Agmatine deiminase.; [PF04371] Porphyromonas-type peptidyl-arginine deiminase; [GO:0009446] putrescine biosynthetic process; [PTHR31377] FAMILY NOT NAMED14.390.7365
5 Mapoly0056s0141 [PTHR31694] FAMILY NOT NAMED; [PF13668] Ferritin-like domain17.780.6199
6 Mapoly0095s0049 [PTHR13513] E3 UBIQUITIN-PROTEIN LIGASE UBR7; [GO:0008270] zinc ion binding; [PF02207] Putative zinc finger in N-recognin (UBR box); [KOG2752] Uncharacterized conserved protein, contains N-recognin-type Zn-finger; [GO:0004842] ubiquitin-protein ligase activity; [K11979] E3 ubiquitin-protein ligase UBR717.860.7289
7 Mapoly0063s0025 [GO:0009607] response to biotic stimulus; [PTHR31213] FAMILY NOT NAMED; [PF00407] Pathogenesis-related protein Bet v I family; [GO:0006952] defense response18.000.6849
8 Mapoly0016s0144 [GO:0005783] endoplasmic reticulum; [GO:0045454] cell redox homeostasis; [PF07749] Endoplasmic reticulum protein ERp29, C-terminal domain; [5.3.4.1] Protein disulfide-isomerase.; [KOG0191] Thioredoxin/protein disulfide isomerase; [K09584] protein disulfide-isomerase A6 [EC:5.3.4.1]; [PF00085] Thioredoxin; [PTHR18929:SF39] GLUCOCEREBROSIDASE; [PTHR18929] PROTEIN DISULFIDE ISOMERASE19.080.7248
9 Mapoly0033s0073 [PTHR10984:SF2] THIOREDOXIN-RELATED; [GO:0045454] cell redox homeostasis; [PTHR10984] ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN; [PF13850] Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); [KOG2667] COPII vesicle protein; [PF00085] Thioredoxin; [PF07970] Endoplasmic reticulum vesicle transporter19.240.7310
10 Mapoly0004s0188 [GO:0005840] ribosome; [K02991] small subunit ribosomal protein S6e; [PTHR11502] 40S RIBOSOMAL PROTEIN S6; [KOG1646] 40S ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01092] Ribosomal protein S6e; [GO:0006412] translation20.710.7552
11 Mapoly0011s0129 [KOG0131] Splicing factor 3b, subunit 4; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PTHR24011] FAMILY NOT NAMED; [PF07145] Ataxin-2 C-terminal region; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)21.070.7286
12 Mapoly0001s0108 -21.210.6869
13 Mapoly0088s0053 -21.350.6839
14 Mapoly0090s0046 [GO:0003677] DNA binding; [KOG1756] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H421.730.7513
15 Mapoly0033s0127 [PF01713] Smr domain; [PTHR13308] UNCHARACTERIZED; [PF08590] Domain of unknown function (DUF1771)22.580.7504
16 Mapoly0083s0043 [GO:0008375] acetylglucosaminyltransferase activity; [GO:0016020] membrane; [PF02485] Core-2/I-Branching enzyme; [PTHR31042] FAMILY NOT NAMED23.220.7475
17 Mapoly0073s0062 -26.530.6860
18 Mapoly0051s0111 [PTHR10907] REGUCALCIN; [PF08450] SMP-30/Gluconolaconase/LRE-like region28.200.7099
19 Mapoly0214s0007 [PTHR10457] MEVALONATE KINASE/GALACTOKINASE; [GO:0005524] ATP binding; [GO:0005737] cytoplasm; [GO:0004496] mevalonate kinase activity; [GO:0008299] isoprenoid biosynthetic process; [PF08544] GHMP kinases C terminal; [PF00288] GHMP kinases N terminal domain; [2.7.1.36] Mevalonate kinase.; [KOG1511] Mevalonate kinase MVK/ERG12; [K00869] mevalonate kinase [EC:2.7.1.36]; [PTHR10457:SF4] MEVALONATE KINASE28.720.5862
20 Mapoly0083s0041 [GO:0046912] transferase activity, transferring acyl groups, acyl groups converted into alkyl on transfer; [KOG1254] ATP-citrate lyase; [2.3.3.8] ATP citrate synthase.; [K01648] ATP citrate (pro-S)-lyase [EC:2.3.3.8]; [GO:0008152] metabolic process; [GO:0044262] cellular carbohydrate metabolic process; [GO:0003824] catalytic activity; [PF00285] Citrate synthase; [PF00549] CoA-ligase; [PTHR23118] ATP-CITRATE SYNTHASE29.460.6862
21 Mapoly0019s0062 -31.810.6791
22 Mapoly0033s0143 [K03127] transcription initiation factor TFIID subunit 13; [KOG3901] Transcription initiation factor IID subunit; [PF02269] Transcription initiation factor IID, 18kD subunit; [GO:0006366] transcription from RNA polymerase II promoter; [PTHR11380] TRANSCRIPTION INITIATION FACTOR TFIID/SUPT3-RELATED32.560.7044
23 Mapoly0021s0075 [GO:0055114] oxidation-reduction process; [KOG0022] Alcohol dehydrogenase, class III; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [PTHR11695:SF269] PUTATIVE OXIDOREDUCTASE; [PF00107] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED32.730.6730
24 Mapoly0046s0111 [GO:0004555] alpha,alpha-trehalase activity; [PTHR10412] MANNOSYL-OLIGOSACCHARIDE GLUCOSIDASE; [GO:0005991] trehalose metabolic process; [PF01204] Trehalase34.470.6424
25 Mapoly0038s0031 [GO:0005874] microtubule; [PF02970] Tubulin binding cofactor A; [GO:0007021] tubulin complex assembly; [PTHR21500] TUBULIN-SPECIFIC CHAPERONE A; [KOG3470] Beta-tubulin folding cofactor A; [PTHR21500:SF0] SUBFAMILY NOT NAMED; [GO:0051082] unfolded protein binding35.100.6998
26 Mapoly0111s0035 [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR12547] CCCH ZINC FINGER/TIS11-RELATED; [GO:0046872] metal ion binding; [KOG1677] CCCH-type Zn-finger protein38.010.7086
27 Mapoly0031s0081 [PF03151] Triose-phosphate Transporter family; [PTHR11132] SOLUTE CARRIER FAMILY 35; [KOG1441] Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter38.790.6793
28 Mapoly0001s0441 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [KOG4753] Predicted membrane protein40.000.7097
29 Mapoly0086s0077 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [PF00067] Cytochrome P45043.990.6783
30 Mapoly0001s0107 [PTHR31852] FAMILY NOT NAMED44.540.6330
31 Mapoly0065s0048 [PTHR11060:SF0] PROTEIN MEMO1; [K06990] aspartate dehydrogenase [EC:1.4.1.21]; [PF01875] Memo-like protein; [KOG3086] Predicted dioxygenase; [PTHR11060] PROTEIN MEMO145.080.7407
32 Mapoly0025s0057 [PTHR10907] REGUCALCIN; [PF08450] SMP-30/Gluconolaconase/LRE-like region; [KOG4499] Ca2+-binding protein Regucalcin/SMP3046.990.6963
33 Mapoly0025s0126 [KOG4764] Uncharacterized conserved protein; [PF05160] DSS1/SEM1 family; [PTHR16771:SF0] SUBFAMILY NOT NAMED; [PTHR16771] 26 PROTEASOME COMPLEX SUBUNIT DSS148.060.7237
34 Mapoly0031s0046 [PF06521] PAR1 protein49.380.6774
35 Mapoly0052s0081 [GO:0016020] membrane; [PTHR11654] OLIGOPEPTIDE TRANSPORTER-RELATED; [PF00854] POT family; [GO:0006810] transport; [GO:0005215] transporter activity49.750.6859
36 Mapoly0169s0017 -49.910.6771
37 Mapoly0216s0002 -54.770.6650
38 Mapoly0052s0073 [PTHR15907] FAMILY NOT NAMED; [PF04749] PLAC8 family55.820.7048
39 Mapoly0014s0224 [GO:0003677] DNA binding; [PTHR31251] FAMILY NOT NAMED; [GO:0005634] nucleus; [PF03110] SBP domain56.530.6855
40 Mapoly0003s0072 [K06693] 26S proteasome non-ATPase regulatory subunit 9; [PTHR12651] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 9; [PTHR12651:SF1] 26S PROTEASOME REGULATORY SUBUNIT P27; [KOG3129] 26S proteasome regulatory complex, subunit PSMD957.250.6885
41 Mapoly0054s0024 [GO:0005524] ATP binding; [GO:0016021] integral to membrane; [PTHR24223] FAMILY NOT NAMED; [PF00664] ABC transporter transmembrane region; [GO:0016887] ATPase activity; [GO:0006810] transport; [GO:0055085] transmembrane transport; [KOG0054] Multidrug resistance-associated protein/mitoxantrone resistance protein, ABC superfamily; [GO:0042626] ATPase activity, coupled to transmembrane movement of substances; [PF00005] ABC transporter58.890.6417
42 Mapoly0061s0032 [GO:0016020] membrane; [PF07933] Protein of unknown function (DUF1681); [PTHR12847:SF4] SUBFAMILY NOT NAMED; [KOG2500] Uncharacterized conserved protein; [GO:0006897] endocytosis; [PTHR12847] ATP-BINDING CASSETTE (ABC) TRANSPORTER-RELATED61.510.6829
43 Mapoly0039s0083 [KOG1684] Enoyl-CoA hydratase; [3.1.2.4] 3-hydroxyisobutyryl-CoA hydrolase.; [PF00378] Enoyl-CoA hydratase/isomerase family; [GO:0008152] metabolic process; [GO:0003824] catalytic activity; [K05605] 3-hydroxyisobutyryl-CoA hydrolase [EC:3.1.2.4]; [PTHR11941] ENOYL-COA HYDRATASE-RELATED; [PF13766] 2-enoyl-CoA Hydratase C-terminal region62.050.6369
44 Mapoly0020s0069 [GO:0003677] DNA binding; [PTHR11239:SF1] DNA-DIRECTED RNA POLYMERASE II; [KOG2691] RNA polymerase II subunit 9; [PF02150] RNA polymerases M/15 Kd subunit; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR11239] DNA-DIRECTED RNA POLYMERASE62.610.6817
45 Mapoly0045s0087 -63.510.6380
46 Mapoly0006s0093 [GO:0009058] biosynthetic process; [K00654] serine palmitoyltransferase [EC:2.3.1.50]; [GO:0030170] pyridoxal phosphate binding; [PTHR13693] CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE; [KOG1357] Serine palmitoyltransferase; [2.3.1.50] Serine C-palmitoyltransferase.; [PTHR13693:SF3] SERINE PALMITOYLTRANSFERASE 2; [PF00155] Aminotransferase class I and II63.770.6534
47 Mapoly0019s0101 [GO:0016020] membrane; [PTHR11958] SODIUM/DICARBOXYLATE SYMPORTER-RELATED; [PF00375] Sodium:dicarboxylate symporter family; [KOG3787] Glutamate/aspartate and neutral amino acid transporters; [GO:0017153] sodium:dicarboxylate symporter activity; [GO:0006835] dicarboxylic acid transport; [K05613] solute carrier family 1 (glial high affinity glutamate transporter), member 264.250.6318
48 Mapoly0264s0001 [GO:0005506] iron ion binding; [KOG0156] Cytochrome P450 CYP2 subfamily; [GO:0055114] oxidation-reduction process; [GO:0016705] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen; [GO:0020037] heme binding; [PTHR24298] FAMILY NOT NAMED; [PF00067] Cytochrome P45064.270.6346
49 Mapoly0037s0056 [GO:0003677] DNA binding; [KOG1745] Histones H3 and H4; [GO:0000786] nucleosome; [K11253] histone H3; [PTHR11426] HISTONE H3; [PF00125] Core histone H2A/H2B/H3/H466.090.7016
50 Mapoly0001s0064 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [GO:0008173] RNA methyltransferase activity; [PTHR12029] RNA METHYLTRANSFERASE; [KOG0838] RNA Methylase, SpoU family; [PF00588] SpoU rRNA Methylase family69.330.6978
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