Guide Gene

Gene ID
Mapoly0033s0073
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR10984:SF2] THIOREDOXIN-RELATED; [GO:0045454] cell redox homeostasis; [PTHR10984] ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN; [PF13850] Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); [KOG2667] COPII vesicle protein; [PF00085] Thioredoxin; [PF07970] Endoplasmic reticulum vesicle transporter

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0033s0073 [PTHR10984:SF2] THIOREDOXIN-RELATED; [GO:0045454] cell redox homeostasis; [PTHR10984] ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN; [PF13850] Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); [KOG2667] COPII vesicle protein; [PF00085] Thioredoxin; [PF07970] Endoplasmic reticulum vesicle transporter 0.00 1.0000
1 Mapoly0066s0078 [GO:0034453] microtubule anchoring; [PTHR15431:SF3] FGFR1 ONCOGENE PARTNER; [PTHR15431] FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN; [GO:0005815] microtubule organizing center; [PF09398] FOP N terminal dimerisation domain1.000.8400
2 Mapoly0006s0093 [GO:0009058] biosynthetic process; [K00654] serine palmitoyltransferase [EC:2.3.1.50]; [GO:0030170] pyridoxal phosphate binding; [PTHR13693] CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE; [KOG1357] Serine palmitoyltransferase; [2.3.1.50] Serine C-palmitoyltransferase.; [PTHR13693:SF3] SERINE PALMITOYLTRANSFERASE 2; [PF00155] Aminotransferase class I and II3.740.7549
3 Mapoly0108s0026 [GO:0016020] membrane; [GO:0006486] protein glycosylation; [KOG2292] Oligosaccharyltransferase, STT3 subunit; [2.4.1.119] Transferred entry: 2.4.99.18.; [PTHR13872] 60S RIBOSOMAL PROTEIN L35; [K07151] dolichyl-diphosphooligosaccharide--protein glycosyltransferase [EC:2.4.1.119]; [PF02516] Oligosaccharyl transferase STT3 subunit; [GO:0004576] oligosaccharyl transferase activity4.470.7963
4 Mapoly0023s0050 [PF11559] Afadin- and alpha -actinin-Binding; [PTHR21736] VERNALIZATION-INSENSITIVE PROTEIN 35.660.8138
5 Mapoly0028s0115 [PTHR12640:SF0] SUBFAMILY NOT NAMED; [GO:0008250] oligosaccharyltransferase complex; [GO:0016021] integral to membrane; [PTHR12640] RIBOPHORIN II; [KOG2447] Oligosaccharyltransferase, delta subunit (ribophorin II); [PF05817] Oligosaccharyltransferase subunit Ribophorin II; [GO:0006487] protein N-linked glycosylation5.660.7704
6 Mapoly0011s0129 [KOG0131] Splicing factor 3b, subunit 4; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PTHR24011] FAMILY NOT NAMED; [PF07145] Ataxin-2 C-terminal region; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)6.000.7835
7 Mapoly0167s0026 [PTHR19134] PROTEIN-TYROSINE PHOSPHATASE; [PF00102] Protein-tyrosine phosphatase; [GO:0006470] protein dephosphorylation; [KOG0789] Protein tyrosine phosphatase; [GO:0004725] protein tyrosine phosphatase activity7.940.7472
8 Mapoly0058s0111 [PF02823] ATP synthase, Delta/Epsilon chain, beta-sandwich domain; [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [GO:0046961] proton-transporting ATPase activity, rotational mechanism; [GO:0045261] proton-transporting ATP synthase complex, catalytic core F(1); [KOG1758] Mitochondrial F1F0-ATP synthase, subunit delta/ATP16; [K02134] F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]; [GO:0015986] ATP synthesis coupled proton transport; [PTHR13822] ATP SYNTHASE DELTA/EPSILON CHAIN8.720.7480
9 Mapoly0057s0091 [PF04577] Protein of unknown function (DUF563); [PTHR20961] GLYCOSYLTRANSFERASE; [GO:0016757] transferase activity, transferring glycosyl groups9.540.6922
10 Mapoly0014s0097 [PF13414] TPR repeat; [KOG1308] Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein; [PTHR22904:SF34] HSC70-INTERACTING PROTEIN; [PTHR22904] TPR REPEAT CONTAINING PROTEIN10.100.7976
11 Mapoly0014s0204 [PTHR24012] FAMILY NOT NAMED; [PTHR24012:SF31] SUBFAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [KOG0148] Apoptosis-promoting RNA-binding protein TIA-1/TIAR (RRM superfamily)12.120.7759
12 Mapoly0001s0126 [PF05216] UNC-50 family; [PTHR12841] FAMILY NOT NAMED; [KOG3012] Uncharacterized conserved protein16.430.7400
13 Mapoly0001s0457 [PTHR14360:SF1] UNCHARACTERIZED; [PF07798] Protein of unknown function (DUF1640); [KOG3156] Uncharacterized membrane protein; [PTHR14360] UNCHARACTERIZED17.000.7494
14 Mapoly0032s0098 [GO:0055114] oxidation-reduction process; [GO:0016706] oxidoreductase activity, acting on paired donors, with incorporation or reduction of molecular oxygen, 2-oxoglutarate as one donor, and incorporation of one atom each of oxygen into both donors; [GO:0016491] oxidoreductase activity; [PTHR10869] PROLYL 4-HYDROXYLASE ALPHA SUBUNIT; [1.14.11.2] Procollagen-proline dioxygenase.; [K00472] prolyl 4-hydroxylase [EC:1.14.11.2]; [PF03171] 2OG-Fe(II) oxygenase superfamily19.240.7310
15 Mapoly0207s0009 [PTHR10241] LETHAL(2) GIANT LARVAE PROTEIN; [GO:0016192] vesicle-mediated transport; [GO:0016021] integral to membrane; [PTHR10241:SF25] SUBFAMILY NOT NAMED; [PF00957] Synaptobrevin20.120.7232
16 Mapoly0032s0081 [GO:0008641] small protein activating enzyme activity; [GO:0045116] protein neddylation; [GO:0005524] ATP binding; [PTHR10953:SF6] UBIQUITIN-ACTIVATING ENZYME E1C (NEDD8-ACTIVATING ENZYME E1 CATALYTIC SUBUNIT); [KOG2015] NEDD8-activating complex, catalytic component UBA3; [PF08825] E2 binding domain; [GO:0016881] acid-amino acid ligase activity; [PF00899] ThiF family; [PF02134] Repeat in ubiquitin-activating (UBA) protein; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity; [PF10585] Ubiquitin-activating enzyme active site; [GO:0006464] cellular protein modification process; [K10686] ubiquitin-activating enzyme E1 C [EC:6.3.2.19]20.400.7426
17 Mapoly0086s0078 [GO:0003677] DNA binding; [GO:0006275] regulation of DNA replication; [GO:0030337] DNA polymerase processivity factor activity; [PTHR11352] PROLIFERATING CELL NUCLEAR ANTIGEN; [PF00705] Proliferating cell nuclear antigen, N-terminal domain; [KOG1636] DNA polymerase delta processivity factor (proliferating cell nuclear antigen); [PF02747] Proliferating cell nuclear antigen, C-terminal domain20.570.7654
18 Mapoly0001s0009 [PTHR10540:SF7] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7; [GO:0005515] protein binding; [PF13012] Maintenance of mitochondrial structure and function; [PTHR10540] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1556] 26S proteasome regulatory complex, subunit RPN8/PSMD7; [K03038] 26S proteasome regulatory subunit N822.250.7853
19 Mapoly0052s0111 [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [KOG4206] Spliceosomal protein snRNP-U1A/U2B; [PTHR13976] HETEROGENEOUS NUCLEAR RIBONUCLEOPROTEIN-RELATED24.600.7605
20 Mapoly0074s0051 [GO:0000287] magnesium ion binding; [PTHR11902] ENOLASE; [PF03952] Enolase, N-terminal domain; [GO:0004634] phosphopyruvate hydratase activity; [GO:0006096] glycolysis; [PF00113] Enolase, C-terminal TIM barrel domain; [4.2.1.11] Phosphopyruvate hydratase.; [GO:0000015] phosphopyruvate hydratase complex; [K01689] enolase [EC:4.2.1.11]; [KOG2670] Enolase25.100.7386
21 Mapoly0007s0143 [KOG2235] Uncharacterized conserved protein; [PTHR31057] FAMILY NOT NAMED; [PF09743] Uncharacterized conserved protein (DUF2042); [PTHR31057:SF0] SUBFAMILY NOT NAMED27.710.7431
22 Mapoly0084s0054 [K03029] 26S proteasome regulatory subunit N10; [PF02809] Ubiquitin interaction motif; [PF13519] von Willebrand factor type A domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR10223] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4; [GO:0008540] proteasome regulatory particle, base subcomplex; [KOG2884] 26S proteasome regulatory complex, subunit RPN10/PSMD428.350.7565
23 Mapoly0100s0038 [GO:0007264] small GTPase mediated signal transduction; [PTHR24073] FAMILY NOT NAMED; [KOG0098] GTPase Rab2, small G protein superfamily; [PF15305] Intraflagellar transport protein 43; [PF00071] Ras family; [GO:0005525] GTP binding; [GO:0030991] intraflagellar transport particle A29.460.7398
24 Mapoly0011s0143 [PTHR15481:SF0] SUBFAMILY NOT NAMED; [K14325] RNA-binding protein with serine-rich domain 1; [PTHR15481] RIBONUCLEIC ACID BINDING PROTEIN S1; [GO:0003676] nucleic acid binding; [KOG0130] RNA-binding protein RBM8/Tsunagi (RRM superfamily); [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)29.660.7636
25 Mapoly0009s0036 [KOG4259] Putative nucleic acid-binding protein Hcc-1/proliferation associated cytokine-inducible protein, contains SAP domain; [GO:0003676] nucleic acid binding; [PTHR21594] NUCLEAR PROTEIN HCC-1/THO1; [PF02037] SAP domain32.760.7386
26 Mapoly0057s0039 [PTHR12409] PREFOLDIN SUBUNIT 3; [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3313] Molecular chaperone Prefoldin, subunit 3; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding32.980.7383
27 Mapoly0004s0213 [PF03215] Rad17 cell cycle checkpoint protein; [GO:0005634] nucleus; [GO:0006281] DNA repair; [PTHR12172] CELL CYCLE CHECKPOINT PROTEIN RAD17; [KOG1970] Checkpoint RAD17-RFC complex, RAD17/RAD24 component; [PTHR12172:SF0] SUBFAMILY NOT NAMED; [K06662] cell cycle checkpoint protein; [GO:0007049] cell cycle33.170.7427
28 Mapoly0072s0034 [K12178] COP9 signalosome complex subunit 4; [GO:0005515] protein binding; [KOG1497] COP9 signalosome, subunit CSN4; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4; [PTHR10855:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 433.230.7203
29 Mapoly0167s0006 -35.100.7450
30 Mapoly0008s0275 [GO:0006486] protein glycosylation; [GO:0005783] endoplasmic reticulum; [GO:0004579] dolichyl-diphosphooligosaccharide-protein glycotransferase activity; [PTHR21049:SF0] SUBFAMILY NOT NAMED; [K12666] oligosaccharyltransferase complex subunit alpha (ribophorin I); [PF04597] Ribophorin I; [KOG2291] Oligosaccharyltransferase, alpha subunit (ribophorin I); [GO:0016021] integral to membrane; [PTHR21049] RIBOPHORIN I35.500.6860
31 Mapoly0004s0054 [KOG0379] Kelch repeat-containing proteins; [PTHR23244] KELCH REPEAT DOMAIN; [PF13415] Galactose oxidase, central domain; [GO:0005515] protein binding; [PF07646] Kelch motif; [PF00887] Acyl CoA binding protein; [GO:0000062] fatty-acyl-CoA binding36.480.6798
32 Mapoly0003s0313 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [K07977] Arf/Sar family, other; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding37.710.7485
33 Mapoly0083s0033 [PTHR10539] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13; [GO:0005515] protein binding; [KOG2908] 26S proteasome regulatory complex, subunit RPN9/PSMD13; [K03039] 26S proteasome regulatory subunit N9; [PF01399] PCI domain38.420.7259
34 Mapoly0101s0017 [KOG1294] Apurinic/apyrimidinic endonuclease and related enzymes; [PTHR22748:SF1] AP ENDONUCLEASE; [GO:0006281] DNA repair; [PF03372] Endonuclease/Exonuclease/phosphatase family; [GO:0004518] nuclease activity; [PTHR22748] AP ENDONUCLEASE38.500.7307
35 Mapoly0036s0154 [KOG2606] OTU (ovarian tumor)-like cysteine protease; [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PTHR12419:SF10] gb def: ENSANGP00000019868 (Fragment); [PF02338] OTU-like cysteine protease40.200.7496
36 Mapoly0001s0273 [PTHR10501] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; [PTHR10501:SF0] SMALL NUCLEAR RIBONUCLEOPROTEIN; [GO:0000398] mRNA splicing, via spliceosome; [GO:0003676] nucleic acid binding; [GO:0017069] snRNA binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)41.530.7441
37 Mapoly0002s0042 [GO:0031011] Ino80 complex; [PTHR13052:SF0] SUBFAMILY NOT NAMED; [PTHR13052] NFRKB-RELATED42.050.7325
38 Mapoly0091s0013 [GO:0003723] RNA binding; [KOG2202] U2 snRNP splicing factor, small subunit, and related proteins; [PF00642] Zinc finger C-x8-C-x5-C-x3-H type (and similar); [PTHR12620] U2 SNRNP AUXILIARY FACTOR, SMALL SUBUNIT; [GO:0005634] nucleus; [K12836] splicing factor U2AF 35 kDa subunit; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [GO:0046872] metal ion binding42.070.7521
39 Mapoly0004s0188 [GO:0005840] ribosome; [K02991] small subunit ribosomal protein S6e; [PTHR11502] 40S RIBOSOMAL PROTEIN S6; [KOG1646] 40S ribosomal protein S6; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01092] Ribosomal protein S6e; [GO:0006412] translation43.270.7551
40 Mapoly0016s0144 [GO:0005783] endoplasmic reticulum; [GO:0045454] cell redox homeostasis; [PF07749] Endoplasmic reticulum protein ERp29, C-terminal domain; [5.3.4.1] Protein disulfide-isomerase.; [KOG0191] Thioredoxin/protein disulfide isomerase; [K09584] protein disulfide-isomerase A6 [EC:5.3.4.1]; [PF00085] Thioredoxin; [PTHR18929:SF39] GLUCOCEREBROSIDASE; [PTHR18929] PROTEIN DISULFIDE ISOMERASE45.520.7141
41 Mapoly0051s0075 [GO:0003723] RNA binding; [KOG2190] PolyC-binding proteins alphaCP-1 and related KH domain proteins; [PTHR10288] KH DOMAIN CONTAINING RNA BINDING PROTEIN; [PTHR10288:SF102] ANKYRIN REPEAT-CONTAINING PROTEIN; [PF00013] KH domain46.480.7131
42 Mapoly0001s0023 [PTHR11802:SF8] SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE D) (PLANTS); [PF00450] Serine carboxypeptidase; [3.4.16.5] Carboxypeptidase C.; [K13289] cathepsin A (carboxypeptidase C) [EC:3.4.16.5]; [PTHR11802] SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE; [KOG1282] Serine carboxypeptidases (lysosomal cathepsin A); [GO:0004185] serine-type carboxypeptidase activity; [GO:0006508] proteolysis47.010.6620
43 Mapoly0045s0046 -49.320.6992
44 Mapoly0036s0142 [GO:0003677] DNA binding; [KOG1757] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H450.400.7473
45 Mapoly0041s0006 [GO:0005515] protein binding; [KOG3250] COP9 signalosome, subunit CSN7; [PF01399] PCI domain; [K12180] COP9 signalosome complex subunit 7; [PTHR15350] COP9 SIGNALOSOME COMPLEX SUBUNIT 7/DENDRITIC CELL PROTEIN GA1751.690.6629
46 Mapoly0115s0071 [GO:0005515] protein binding; [PF13414] TPR repeat; [PF00226] DnaJ domain; [PF00515] Tetratricopeptide repeat; [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER; [KOG0550] Molecular chaperone (DnaJ superfamily)52.080.6038
47 Mapoly0057s0106 [K08288] protein kinase C substrate 80K-H; [PTHR12630:SF4] PROTEIN KINASE C SUBSTRATE 80K-H; [KOG2397] Protein kinase C substrate, 80 KD protein, heavy chain; [PTHR12630] N-LINKED OLIGOSACCHARIDE PROCESSING; [PF12999] Glucosidase II beta subunit-like; [PF13015] Glucosidase II beta subunit-like protein52.340.6339
48 Mapoly0006s0138 [PTHR15856] PHD FINGER PROTEIN 20-RELATED; [KOG1844] PHD Zn-finger proteins52.530.6934
49 Mapoly0074s0077 [PTHR22573] PHOSPHOHEXOMUTASE FAMILY MEMBER; [GO:0016868] intramolecular transferase activity, phosphotransferases; [PTHR22573:SF15] SUBFAMILY NOT NAMED; [GO:0005975] carbohydrate metabolic process; [K01836] phosphoacetylglucosamine mutase [EC:5.4.2.3]; [KOG2537] Phosphoglucomutase/phosphomannomutase; [PF02879] Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain II; [PF02878] Phosphoglucomutase/phosphomannomutase, alpha/beta/alpha domain I; [5.4.2.3] Phosphoacetylglucosamine mutase.; [PF00408] Phosphoglucomutase/phosphomannomutase, C-terminal domain53.400.6787
50 Mapoly0014s0134 [KOG2442] Uncharacterized conserved protein, contains PA domain; [PF02225] PA domain; [PTHR12174] SIGNAL PEPTIDE PEPTIDASE; [GO:0016021] integral to membrane; [PF04258] Signal peptide peptidase; [GO:0004190] aspartic-type endopeptidase activity53.480.7151
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