Guide Gene

Gene ID
Mapoly0066s0078
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0034453] microtubule anchoring; [PTHR15431:SF3] FGFR1 ONCOGENE PARTNER; [PTHR15431] FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN; [GO:0005815] microtubule organizing center; [PF09398] FOP N terminal dimerisation domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0066s0078 [GO:0034453] microtubule anchoring; [PTHR15431:SF3] FGFR1 ONCOGENE PARTNER; [PTHR15431] FGFR1 ONCOGENE PARTNER/LISH DOMAIN-CONTAINING PROTEIN; [GO:0005815] microtubule organizing center; [PF09398] FOP N terminal dimerisation domain 0.00 1.0000
1 Mapoly0033s0073 [PTHR10984:SF2] THIOREDOXIN-RELATED; [GO:0045454] cell redox homeostasis; [PTHR10984] ENDOPLASMIC RETICULUM-GOLGI INTERMEDIATE COMPARTMENT PROTEIN; [PF13850] Endoplasmic Reticulum-Golgi Intermediate Compartment (ERGIC); [KOG2667] COPII vesicle protein; [PF00085] Thioredoxin; [PF07970] Endoplasmic reticulum vesicle transporter1.000.8400
2 Mapoly0057s0039 [PTHR12409] PREFOLDIN SUBUNIT 3; [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3313] Molecular chaperone Prefoldin, subunit 3; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding5.920.7942
3 Mapoly0001s0009 [PTHR10540:SF7] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7; [GO:0005515] protein binding; [PF13012] Maintenance of mitochondrial structure and function; [PTHR10540] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1556] 26S proteasome regulatory complex, subunit RPN8/PSMD7; [K03038] 26S proteasome regulatory subunit N88.720.8264
4 Mapoly0041s0007 [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3048] Molecular chaperone Prefoldin, subunit 5; [GO:0006457] protein folding; [PTHR12674] PREFOLDIN SUBUNIT 5; [GO:0051082] unfolded protein binding; [K04797] prefoldin alpha subunit12.610.7949
5 Mapoly0052s0023 [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02736] 20S proteasome subunit beta 7 [EC:3.4.25.1]; [PTHR11599:SF5] PROTEASOME SUBUNIT BETA TYPE 4; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [KOG0185] 20S proteasome, regulatory subunit beta type PSMB4/PRE4; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA13.270.7944
6 Mapoly0006s0093 [GO:0009058] biosynthetic process; [K00654] serine palmitoyltransferase [EC:2.3.1.50]; [GO:0030170] pyridoxal phosphate binding; [PTHR13693] CLASS II AMINOTRANSFERASE/8-AMINO-7-OXONONANOATE SYNTHASE; [KOG1357] Serine palmitoyltransferase; [2.3.1.50] Serine C-palmitoyltransferase.; [PTHR13693:SF3] SERINE PALMITOYLTRANSFERASE 2; [PF00155] Aminotransferase class I and II13.560.7246
7 Mapoly0001s0126 [PF05216] UNC-50 family; [PTHR12841] FAMILY NOT NAMED; [KOG3012] Uncharacterized conserved protein13.750.7455
8 Mapoly0048s0065 [KOG1672] ATP binding protein; [GO:0045454] cell redox homeostasis; [PTHR21148] PHOSDUCIN-RELATED; [PF00085] Thioredoxin15.680.7321
9 Mapoly0005s0052 [GO:0005515] protein binding; [KOG1463] 26S proteasome regulatory complex, subunit RPN6/PSMD11; [PF01399] PCI domain; [PTHR10678] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2; [PTHR10678:SF2] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11 (26S PROTEASOME REGULATORY SUBUNIT S9); [K03036] 26S proteasome regulatory subunit N615.870.7627
10 Mapoly0015s0013 [GO:0000502] proteasome complex; [PTHR10758:SF2] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3; [GO:0005515] protein binding; [PTHR10758] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 3/COP9 SIGNALOSOME COMPLEX SUBUNIT 3; [PF08375] Proteasome regulatory subunit C-terminal; [KOG2581] 26S proteasome regulatory complex, subunit RPN3/PSMD3; [GO:0030234] enzyme regulator activity; [PF01399] PCI domain; [K03033] 26S proteasome regulatory subunit N3; [GO:0042176] regulation of protein catabolic process17.230.7606
11 Mapoly0027s0144 [GO:0016272] prefoldin complex; [KOG3501] Molecular chaperone Prefoldin, subunit 1; [PTHR20903] PREFOLDIN SUBUNIT 1-RELATED; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding; [PF01920] Prefoldin subunit17.830.7754
12 Mapoly0003s0313 [PTHR11711] ADP RIBOSYLATION FACTOR-RELATED; [PF00025] ADP-ribosylation factor family; [K07977] Arf/Sar family, other; [KOG0070] GTP-binding ADP-ribosylation factor Arf1; [GO:0005525] GTP binding18.760.7659
13 Mapoly0029s0049 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016602] CCAAT-binding factor complex; [KOG1657] CCAAT-binding factor, subunit C (HAP5); [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR10252:SF8] TRANSCRIPTIONAL ACTIVATOR HAP5; [GO:0005622] intracellular; [PTHR10252] HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED28.350.7592
14 Mapoly0087s0074 [GO:0005685] U1 snRNP; [PF06220] U1 zinc finger; [GO:0008270] zinc ion binding; [GO:0000398] mRNA splicing, via spliceosome; [KOG3454] U1 snRNP-specific protein C; [GO:0000387] spliceosomal snRNP assembly; [PTHR31148] FAMILY NOT NAMED28.460.7622
15 Mapoly0072s0034 [K12178] COP9 signalosome complex subunit 4; [GO:0005515] protein binding; [KOG1497] COP9 signalosome, subunit CSN4; [PF01399] PCI domain; [PTHR10855] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 12/COP9 SIGNALOSOME COMPLEX SUBUNIT 4; [PTHR10855:SF2] COP9 SIGNALOSOME COMPLEX SUBUNIT 428.980.7300
16 Mapoly0064s0055 [PF13656] RNA polymerase Rpb3/Rpb11 dimerisation domain; [K03008] DNA-directed RNA polymerase II subunit RPB11; [PTHR13946] DNA-DIRECTED RNA POLYMERASE I,II,III; [KOG4392] RNA polymerase, subunit L29.820.7681
17 Mapoly0032s0081 [GO:0008641] small protein activating enzyme activity; [GO:0045116] protein neddylation; [GO:0005524] ATP binding; [PTHR10953:SF6] UBIQUITIN-ACTIVATING ENZYME E1C (NEDD8-ACTIVATING ENZYME E1 CATALYTIC SUBUNIT); [KOG2015] NEDD8-activating complex, catalytic component UBA3; [PF08825] E2 binding domain; [GO:0016881] acid-amino acid ligase activity; [PF00899] ThiF family; [PF02134] Repeat in ubiquitin-activating (UBA) protein; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR10953] UBIQUITIN-ACTIVATING ENZYME E1; [GO:0003824] catalytic activity; [PF10585] Ubiquitin-activating enzyme active site; [GO:0006464] cellular protein modification process; [K10686] ubiquitin-activating enzyme E1 C [EC:6.3.2.19]30.000.7369
18 Mapoly0028s0115 [PTHR12640:SF0] SUBFAMILY NOT NAMED; [GO:0008250] oligosaccharyltransferase complex; [GO:0016021] integral to membrane; [PTHR12640] RIBOPHORIN II; [KOG2447] Oligosaccharyltransferase, delta subunit (ribophorin II); [PF05817] Oligosaccharyltransferase subunit Ribophorin II; [GO:0006487] protein N-linked glycosylation31.500.7083
19 Mapoly0001s0023 [PTHR11802:SF8] SERINE CARBOXYPEPTIDASE II (CARBOXYPEPTIDASE D) (PLANTS); [PF00450] Serine carboxypeptidase; [3.4.16.5] Carboxypeptidase C.; [K13289] cathepsin A (carboxypeptidase C) [EC:3.4.16.5]; [PTHR11802] SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE; [KOG1282] Serine carboxypeptidases (lysosomal cathepsin A); [GO:0004185] serine-type carboxypeptidase activity; [GO:0006508] proteolysis34.060.6706
20 Mapoly0014s0097 [PF13414] TPR repeat; [KOG1308] Hsp70-interacting protein Hip/Transient component of progesterone receptor complexes and an Hsp70-binding protein; [PTHR22904:SF34] HSC70-INTERACTING PROTEIN; [PTHR22904] TPR REPEAT CONTAINING PROTEIN34.420.7579
21 Mapoly0036s0154 [KOG2606] OTU (ovarian tumor)-like cysteine protease; [PTHR12419] OTU DOMAIN CONTAINING PROTEIN; [PTHR12419:SF10] gb def: ENSANGP00000019868 (Fragment); [PF02338] OTU-like cysteine protease35.300.7585
22 Mapoly0167s0026 [PTHR19134] PROTEIN-TYROSINE PHOSPHATASE; [PF00102] Protein-tyrosine phosphatase; [GO:0006470] protein dephosphorylation; [KOG0789] Protein tyrosine phosphatase; [GO:0004725] protein tyrosine phosphatase activity35.470.6966
23 Mapoly0036s0142 [GO:0003677] DNA binding; [KOG1757] Histone 2A; [K11251] histone H2A; [PTHR23430] HISTONE H2A; [PF00125] Core histone H2A/H2B/H3/H435.690.7590
24 Mapoly0058s0111 [PF02823] ATP synthase, Delta/Epsilon chain, beta-sandwich domain; [3.6.3.14] H(+)-transporting two-sector ATPase.; [GO:0046933] proton-transporting ATP synthase activity, rotational mechanism; [GO:0046961] proton-transporting ATPase activity, rotational mechanism; [GO:0045261] proton-transporting ATP synthase complex, catalytic core F(1); [KOG1758] Mitochondrial F1F0-ATP synthase, subunit delta/ATP16; [K02134] F-type H+-transporting ATPase subunit delta [EC:3.6.3.14]; [GO:0015986] ATP synthesis coupled proton transport; [PTHR13822] ATP SYNTHASE DELTA/EPSILON CHAIN35.940.7030
25 Mapoly0030s0146 -42.060.7083
26 Mapoly0146s0027 [GO:0016020] membrane; [KOG3358] Uncharacterized secreted protein SDF2 (Stromal cell-derived factor 2), contains MIR domains; [PTHR10050] DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE; [PF02815] MIR domain42.470.7262
27 Mapoly0014s0106 [KOG3172] Small nuclear ribonucleoprotein Sm D3; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain43.450.7576
28 Mapoly0071s0007 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [K09494] T-complex protein 1 subunit beta; [KOG0363] Chaperonin complex component, TCP-1 beta subunit (CCT2)43.540.7477
29 Mapoly0083s0033 [PTHR10539] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 13; [GO:0005515] protein binding; [KOG2908] 26S proteasome regulatory complex, subunit RPN9/PSMD13; [K03039] 26S proteasome regulatory subunit N9; [PF01399] PCI domain43.710.7219
30 Mapoly0084s0054 [K03029] 26S proteasome regulatory subunit N10; [PF02809] Ubiquitin interaction motif; [PF13519] von Willebrand factor type A domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR10223] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4; [GO:0008540] proteasome regulatory particle, base subcomplex; [KOG2884] 26S proteasome regulatory complex, subunit RPN10/PSMD446.640.7470
31 Mapoly0066s0080 [GO:0004452] isopentenyl-diphosphate delta-isomerase activity; [PTHR10885] ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE; [PTHR10885:SF0] ISOPENTENYL-DIPHOSPHATE DELTA-ISOMERASE 1; [GO:0016787] hydrolase activity; [5.3.3.2] Isopentenyl-diphosphate Delta-isomerase.; [GO:0008299] isoprenoid biosynthetic process; [K01823] isopentenyl-diphosphate delta-isomerase [EC:5.3.3.2]; [KOG0142] Isopentenyl pyrophosphate:dimethylallyl pyrophosphate isomerase; [PF00293] NUDIX domain46.990.7243
32 Mapoly0023s0050 [PF11559] Afadin- and alpha -actinin-Binding; [PTHR21736] VERNALIZATION-INSENSITIVE PROTEIN 347.830.7467
33 Mapoly0001s0457 [PTHR14360:SF1] UNCHARACTERIZED; [PF07798] Protein of unknown function (DUF1640); [KOG3156] Uncharacterized membrane protein; [PTHR14360] UNCHARACTERIZED48.340.7148
34 Mapoly0011s0129 [KOG0131] Splicing factor 3b, subunit 4; [PF14259] RNA recognition motif (a.k.a. RRM, RBD, or RNP domain); [PTHR24011] FAMILY NOT NAMED; [PF07145] Ataxin-2 C-terminal region; [GO:0003676] nucleic acid binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)50.520.7117
35 Mapoly0191s0002 [PF00091] Tubulin/FtsZ family, GTPase domain; [GO:0005874] microtubule; [PTHR11588] TUBULIN; [GO:0007017] microtubule-based process; [PF03953] Tubulin C-terminal domain; [GO:0006184] GTP catabolic process; [K07374] tubulin alpha; [GO:0003924] GTPase activity; [GO:0051258] protein polymerization; [GO:0043234] protein complex; [KOG1376] Alpha tubulin; [GO:0005525] GTP binding51.060.7402
36 Mapoly0001s0011 [K02219] cyclin-dependent kinase regulatory subunit CKS1; [KOG3484] Cyclin-dependent protein kinase CDC28, regulatory subunit CKS1, and related proteins; [PF01111] Cyclin-dependent kinase regulatory subunit; [GO:0016538] cyclin-dependent protein serine/threonine kinase regulator activity; [GO:0007049] cell cycle; [PTHR23415] CYCLIN-DEPENDENT KINASES REGULATORY SUBUNIT/60S RIBOSOME SUBUNIT BIOGENESIS PROTEIN NIP753.370.7405
37 Mapoly0005s0178 [GO:0005524] ATP binding; [K03066] 26S proteasome regulatory subunit T6; [PTHR23073] 26S PROTEASE REGULATORY SUBUNIT; [KOG0728] 26S proteasome regulatory complex, ATPase RPT6; [PF00004] ATPase family associated with various cellular activities (AAA); [PTHR23073:SF12] 26S PROTEASE REGULATORY SUBUNIT 853.400.6666
38 Mapoly0005s0217 [KOG3428] Small nuclear ribonucleoprotein SMD1 and related snRNPs; [K11087] small nuclear ribonucleoprotein D1; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain53.560.7528
39 Mapoly0066s0117 [PF01230] HIT domain; [PTHR23089] HISTIDINE TRIAD (HIT) PROTEIN; [KOG3275] Zinc-binding protein of the histidine triad (HIT) family54.830.7569
40 Mapoly0086s0078 [GO:0003677] DNA binding; [GO:0006275] regulation of DNA replication; [GO:0030337] DNA polymerase processivity factor activity; [PTHR11352] PROLIFERATING CELL NUCLEAR ANTIGEN; [PF00705] Proliferating cell nuclear antigen, N-terminal domain; [KOG1636] DNA polymerase delta processivity factor (proliferating cell nuclear antigen); [PF02747] Proliferating cell nuclear antigen, C-terminal domain57.170.7347
41 Mapoly0005s0205 [PF00226] DnaJ domain; [KOG0719] Molecular chaperone (DnaJ superfamily); [PTHR24078] DNAJ HOMOLOG SUBFAMILY C MEMBER58.330.7503
42 Mapoly0016s0144 [GO:0005783] endoplasmic reticulum; [GO:0045454] cell redox homeostasis; [PF07749] Endoplasmic reticulum protein ERp29, C-terminal domain; [5.3.4.1] Protein disulfide-isomerase.; [KOG0191] Thioredoxin/protein disulfide isomerase; [K09584] protein disulfide-isomerase A6 [EC:5.3.4.1]; [PF00085] Thioredoxin; [PTHR18929:SF39] GLUCOCEREBROSIDASE; [PTHR18929] PROTEIN DISULFIDE ISOMERASE60.470.7025
43 Mapoly0039s0076 [PF04756] OST3 / OST6 family; [KOG3356] Predicted membrane protein; [PTHR13160] FAMILY NOT NAMED61.400.7437
44 Mapoly0109s0009 [K03574] 7,8-dihydro-8-oxoguanine triphosphatase [EC:3.6.1.-]; [GO:0016787] hydrolase activity; [PTHR22769] MUTT/NUDIX HYDROLASE; [3.6.1.-] In phosphorous-containing anhydrides.; [PF00293] NUDIX domain64.510.6967
45 Mapoly0037s0122 [PTHR12777] SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2; [KOG3459] Small nuclear ribonucleoprotein (snRNP) Sm core protein; [GO:0030532] small nuclear ribonucleoprotein complex; [K11096] small nuclear ribonucleoprotein D2; [PF01423] LSM domain; [GO:0008380] RNA splicing64.930.7381
46 Mapoly0047s0069 [GO:0005524] ATP binding; [GO:0044267] cellular protein metabolic process; [PTHR11353] CHAPERONIN; [PF00118] TCP-1/cpn60 chaperonin family; [KOG0358] Chaperonin complex component, TCP-1 delta subunit (CCT4)65.250.7278
47 Mapoly0021s0070 -65.760.7246
48 Mapoly0016s0054 [K12624] U6 snRNA-associated Sm-like protein LSm5; [PTHR20971] U6 SNRNA-ASSOCIATED PROTEIN; [KOG1775] U6 snRNA-associated Sm-like protein; [PF01423] LSM domain65.800.7338
49 Mapoly0006s0307 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [K02730] 20S proteasome subunit alpha 1 [EC:3.4.25.1]; [KOG0182] 20S proteasome, regulatory subunit alpha type PSMA6/SCL1; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PTHR11599:SF11] PROTEASOME SUBUNIT ALPHA TYPE 6; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA66.450.7478
50 Mapoly0239s0006 [PTHR31570] FAMILY NOT NAMED66.500.7033
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