Guide Gene

Gene ID
Mapoly0006s0307
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [K02730] 20S proteasome subunit alpha 1 [EC:3.4.25.1]; [KOG0182] 20S proteasome, regulatory subunit alpha type PSMA6/SCL1; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PTHR11599:SF11] PROTEASOME SUBUNIT ALPHA TYPE 6; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0006s0307 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [K02730] 20S proteasome subunit alpha 1 [EC:3.4.25.1]; [KOG0182] 20S proteasome, regulatory subunit alpha type PSMA6/SCL1; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PTHR11599:SF11] PROTEASOME SUBUNIT ALPHA TYPE 6; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA 0.00 1.0000
1 Mapoly0016s0041 [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF4] PROTEASOME SUBUNIT BETA TYPE 6,9; [K02738] 20S proteasome subunit beta 1 [EC:3.4.25.1]; [KOG0174] 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA2.000.9309
2 Mapoly0032s0045 [KOG3392] Exon-exon junction complex, Magoh component; [K12877] protein mago nashi; [GO:0005634] nucleus; [PF02792] Mago nashi protein; [PTHR12638] FAMILY NOT NAMED2.240.9097
3 Mapoly0004s0033 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR11599:SF16] PROTEASOME SUBUNIT ALPHA TYPE 2; [KOG0181] 20S proteasome, regulatory subunit alpha type PSMA2/PRE8; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [K02726] 20S proteasome subunit alpha 2 [EC:3.4.25.1]; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA2.450.9189
4 Mapoly0044s0041 [K02734] 20S proteasome subunit beta 4 [EC:3.4.25.1]; [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF6] PROTEASOME SUBUNIT BETA TYPE 2; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [KOG0177] 20S proteasome, regulatory subunit beta type PSMB2/PRE1; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA3.000.9117
5 Mapoly0001s0018 [GO:0004175] endopeptidase activity; [K02728] 20S proteasome subunit alpha 3 [EC:3.4.25.1]; [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0004298] threonine-type endopeptidase activity; [GO:0051603] proteolysis involved in cellular protein catabolic process; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [KOG0178] 20S proteasome, regulatory subunit alpha type PSMA4/PRE9; [PF00227] Proteasome subunit; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR11599:SF13] PROTEASOME SUBUNIT ALPHA TYPE 4; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA3.460.9113
6 Mapoly0052s0023 [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02736] 20S proteasome subunit beta 7 [EC:3.4.25.1]; [PTHR11599:SF5] PROTEASOME SUBUNIT BETA TYPE 4; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [KOG0185] 20S proteasome, regulatory subunit beta type PSMB4/PRE4; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA4.240.8974
7 Mapoly0014s0216 [PF10602] 26S proteasome subunit RPN7; [GO:0005515] protein binding; [K03037] 26S proteasome regulatory subunit N7; [PTHR14145:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6; [KOG0687] 26S proteasome regulatory complex, subunit RPN7/PSMD6; [PTHR14145] 26S PROTESOME SUBUNIT 6; [PF01399] PCI domain5.100.8735
8 Mapoly0073s0035 [PTHR12828:SF3] PROTEASOME MATURATION PROTEIN (UMP1); [K11599] proteasome maturation protein; [PF05348] Proteasome maturation factor UMP1; [KOG3061] Proteasome maturation factor; [PTHR12828] PROTEASOME MATURATION PROTEIN (UMP1)7.940.8934
9 Mapoly0087s0020 [KOG1781] Small Nuclear ribonucleoprotein splicing factor; [K12626] U6 snRNA-associated Sm-like protein LSm7; [PF01423] LSM domain; [PTHR10553] SMALL NUCLEAR RIBONUCLEOPROTEIN9.380.8744
10 Mapoly0001s0009 [PTHR10540:SF7] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 7; [GO:0005515] protein binding; [PF13012] Maintenance of mitochondrial structure and function; [PTHR10540] EUKARYOTIC TRANSLATION INITIATION FACTOR 3 SUBUNIT F-RELATED; [PF01398] JAB1/Mov34/MPN/PAD-1 ubiquitin protease; [KOG1556] 26S proteasome regulatory complex, subunit RPN8/PSMD7; [K03038] 26S proteasome regulatory subunit N810.390.8739
11 Mapoly0005s0217 [KOG3428] Small nuclear ribonucleoprotein SMD1 and related snRNPs; [K11087] small nuclear ribonucleoprotein D1; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain10.950.8713
12 Mapoly0028s0141 [GO:0003723] RNA binding; [KOG2523] Predicted RNA-binding protein with PUA domain; [PF01472] PUA domain; [PTHR22798] MCT-1 PROTEIN; [K07575] PUA domain protein11.400.8856
13 Mapoly0009s0221 [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02735] 20S proteasome subunit beta 3 [EC:3.4.25.1]; [KOG0180] 20S proteasome, regulatory subunit beta type PSMB3/PUP3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA12.370.8668
14 Mapoly0016s0054 [K12624] U6 snRNA-associated Sm-like protein LSm5; [PTHR20971] U6 SNRNA-ASSOCIATED PROTEIN; [KOG1775] U6 snRNA-associated Sm-like protein; [PF01423] LSM domain12.410.8567
15 Mapoly0021s0078 [KOG0175] 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [K02737] 20S proteasome subunit beta 5 [EC:3.4.25.1]; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA; [PTHR11599:SF3] PROTEASOME SUBUNIT BETA TYPE 5,812.450.8372
16 Mapoly0138s0028 -13.750.8446
17 Mapoly0115s0039 [KOG1780] Small Nuclear ribonucleoprotein G; [K11099] small nuclear ribonucleoprotein G; [PF01423] LSM domain; [PTHR10553] SMALL NUCLEAR RIBONUCLEOPROTEIN13.860.8902
18 Mapoly0127s0039 [KOG1774] Small nuclear ribonucleoprotein E; [GO:0005681] spliceosomal complex; [K11097] small nuclear ribonucleoprotein E; [GO:0000398] mRNA splicing, via spliceosome; [PTHR11193] SMALL NUCLEAR RIBONUCLEOPROTEIN E; [PTHR11193:SF0] SMALL NUCLEAR RIBONUCLEOPROTEIN E; [PF01423] LSM domain13.860.8677
19 Mapoly0066s0117 [PF01230] HIT domain; [PTHR23089] HISTIDINE TRIAD (HIT) PROTEIN; [KOG3275] Zinc-binding protein of the histidine triad (HIT) family14.000.8731
20 Mapoly0052s0043 [K11098] small nuclear ribonucleoprotein F; [PTHR11021] SMALL NUCLEAR RIBONUCLEOPROTEIN F (SNRNP-F); [KOG3482] Small nuclear ribonucleoprotein (snRNP) SMF; [PF01423] LSM domain14.070.8876
21 Mapoly0092s0041 [K03104] signal recognition particle subunit SRP14; [PF02290] Signal recognition particle 14kD protein; [GO:0008312] 7S RNA binding; [GO:0005786] signal recognition particle, endoplasmic reticulum targeting; [KOG1761] Signal recognition particle, subunit Srp14; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR12013] SIGNAL RECOGNITION PARTICLE 14 KD PROTEIN; [GO:0030942] endoplasmic reticulum signal peptide binding15.000.8505
22 Mapoly0006s0190 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [KOG3436] 60S ribosomal protein L35; [PTHR13872] 60S RIBOSOMAL PROTEIN L35; [GO:0005622] intracellular; [PF00831] Ribosomal L29 protein; [GO:0006412] translation; [K02918] large subunit ribosomal protein L35e15.200.8577
23 Mapoly0014s0111 [PTHR32001] FAMILY NOT NAMED; [KOG4615] Uncharacterized conserved protein; [PF09775] Keratinocyte-associated protein 215.490.8538
24 Mapoly0039s0076 [PF04756] OST3 / OST6 family; [KOG3356] Predicted membrane protein; [PTHR13160] FAMILY NOT NAMED15.910.8565
25 Mapoly0087s0005 [PF08186] Wound-inducible basic protein family16.120.8466
26 Mapoly0019s0015 [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02732] 20S proteasome subunit beta 6 [EC:3.4.25.1]; [GO:0004298] threonine-type endopeptidase activity; [KOG0179] 20S proteasome, regulatory subunit beta type PSMB1/PRE7; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA16.520.8312
27 Mapoly0073s0081 [K11876] proteasome assembly chaperone 2; [KOG3112] Uncharacterized conserved protein; [PF09754] PAC2 family; [PTHR12970] TUMOR NECROSIS FACTOR SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 (CLAST3)18.250.8322
28 Mapoly0071s0017 [GO:0005838] proteasome regulatory particle; [PTHR12387] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 8; [K03031] 26S proteasome regulatory subunit N12; [GO:0006508] proteolysis; [KOG3151] 26S proteasome regulatory complex, subunit RPN12/PSMD8; [PF03399] SAC3/GANP/Nin1/mts3/eIF-3 p25 family19.360.8025
29 Mapoly0064s0055 [PF13656] RNA polymerase Rpb3/Rpb11 dimerisation domain; [K03008] DNA-directed RNA polymerase II subunit RPB11; [PTHR13946] DNA-DIRECTED RNA POLYMERASE I,II,III; [KOG4392] RNA polymerase, subunit L19.900.8656
30 Mapoly0005s0052 [GO:0005515] protein binding; [KOG1463] 26S proteasome regulatory complex, subunit RPN6/PSMD11; [PF01399] PCI domain; [PTHR10678] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11/COP9 SIGNALOSOME COMPLEX SUBUNIT 2; [PTHR10678:SF2] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 11 (26S PROTEASOME REGULATORY SUBUNIT S9); [K03036] 26S proteasome regulatory subunit N620.490.8101
31 Mapoly0027s0066 [PF05047] Mitochondrial ribosomal protein L51 / S25 / CI-B8 domain; [KOG3445] Mitochondrial/chloroplast ribosomal protein 36a; [PTHR21396] 39S RIBOSOMAL PROTEIN L4323.090.8303
32 Mapoly0082s0039 [PTHR10657] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [KOG3258] Parvulin-like peptidyl-prolyl cis-trans isomerase; [K09579] peptidyl-prolyl cis-trans isomerase NIMA-interacting 4 [EC:5.2.1.8]; [GO:0016853] isomerase activity; [5.2.1.8] Peptidylprolyl isomerase.; [PF00639] PPIC-type PPIASE domain24.490.8616
33 Mapoly0106s0034 [PTHR12936] ANAPHASE-PROMOTING COMPLEX 10; [KOG3437] Anaphase-promoting complex (APC), subunit 10; [PF03256] Anaphase-promoting complex, subunit 10 (APC10); [K03357] anaphase-promoting complex subunit 1025.500.8074
34 Mapoly0086s0040 [GO:0046872] metal ion binding; [PF01363] FYVE zinc finger; [PF12796] Ankyrin repeats (3 copies); [PTHR13856] VHS DOMAIN CONTAINING PROTEIN FAMILY25.510.7895
35 Mapoly0041s0007 [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3048] Molecular chaperone Prefoldin, subunit 5; [GO:0006457] protein folding; [PTHR12674] PREFOLDIN SUBUNIT 5; [GO:0051082] unfolded protein binding; [K04797] prefoldin alpha subunit26.320.8346
36 Mapoly0084s0054 [K03029] 26S proteasome regulatory subunit N10; [PF02809] Ubiquitin interaction motif; [PF13519] von Willebrand factor type A domain; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR10223] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 4; [GO:0008540] proteasome regulatory particle, base subcomplex; [KOG2884] 26S proteasome regulatory complex, subunit RPN10/PSMD426.320.8083
37 Mapoly0052s0053 [PTHR11038] MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM10; [GO:0045039] protein import into mitochondrial inner membrane; [PF02953] Tim10/DDP family zinc finger; [KOG3480] Mitochondrial import inner membrane translocase, subunits TIM10/TIM1227.570.8305
38 Mapoly0092s0049 [PTHR10501] U1 SMALL NUCLEAR RIBONUCLEOPROTEIN A/U2 SMALL NUCLEAR RIBONUCLEOPROTEIN B; [K11094] U2 small nuclear ribonucleoprotein B''; [GO:0000398] mRNA splicing, via spliceosome; [KOG4206] Spliceosomal protein snRNP-U1A/U2B; [GO:0003676] nucleic acid binding; [PF13893] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain); [GO:0017069] snRNA binding; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)28.270.8232
39 Mapoly0014s0106 [KOG3172] Small nuclear ribonucleoprotein Sm D3; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain29.500.8397
40 Mapoly0086s0056 [1.1.1.200] Aldose-6-phosphate reductase (NADPH).; [KOG1577] Aldo/keto reductase family proteins; [PTHR11732] ALDO/KETO REDUCTASE; [PF00248] Aldo/keto reductase family; [K00085] aldose-6-phosphate reductase (NADPH2) [EC:1.1.1.200]29.500.7943
41 Mapoly0014s0113 -29.560.8618
42 Mapoly0065s0037 [GO:0005840] ribosome; [PTHR12059] RIBOSOMAL PROTEIN L23-RELATED; [GO:0003735] structural constituent of ribosome; [PF00276] Ribosomal protein L23; [PTHR12059:SF5] SUBFAMILY NOT NAMED; [GO:0006412] translation29.660.8268
43 Mapoly0086s0082 [KOG3391] Transcriptional co-repressor component; [PF06487] Sin3 associated polypeptide p18 (SAP18); [K14324] histone deacetylase complex subunit SAP18; [PTHR13082] SAP1832.620.8025
44 Mapoly0027s0144 [GO:0016272] prefoldin complex; [KOG3501] Molecular chaperone Prefoldin, subunit 1; [PTHR20903] PREFOLDIN SUBUNIT 1-RELATED; [GO:0006457] protein folding; [GO:0051082] unfolded protein binding; [PF01920] Prefoldin subunit32.980.8070
45 Mapoly0146s0027 [GO:0016020] membrane; [KOG3358] Uncharacterized secreted protein SDF2 (Stromal cell-derived factor 2), contains MIR domains; [PTHR10050] DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE; [PF02815] MIR domain33.050.7915
46 Mapoly0043s0045 [GO:0008233] peptidase activity; [KOG4072] Signal peptidase complex, subunit SPC25; [GO:0006465] signal peptide processing; [K12947] signal peptidase complex subunit 2 [EC:3.4.-.-]; [PF06703] Microsomal signal peptidase 25 kDa subunit (SPC25); [GO:0016021] integral to membrane; [GO:0005787] signal peptidase complex; [3.4.-.-] Acting on peptide bonds (peptide hydrolases).; [PTHR13085:SF0] SUBFAMILY NOT NAMED; [PTHR13085] MICROSOMAL SIGNAL PEPTIDASE 25 KDA SUBUNIT33.230.8061
47 Mapoly0046s0003 [GO:0004579] dolichyl-diphosphooligosaccharide-protein glycotransferase activity; [PF02109] DAD family; [GO:0008250] oligosaccharyltransferase complex; [GO:0016021] integral to membrane; [KOG1746] Defender against cell death protein/oligosaccharyltransferase, epsilon subunit; [PTHR10705] DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1; [K12668] oligosaccharyltransferase complex subunit epsilon35.100.8411
48 Mapoly0026s0002 [GO:0005840] ribosome; [PTHR13528] 39S RIBOSOMAL PROTEIN L28, MITOCHONDRIAL; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [GO:0006412] translation; [PF00830] Ribosomal L28 family35.240.7658
49 Mapoly0216s0010 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0869] CCAAT-binding factor, subunit A (HAP3)36.220.7975
50 Mapoly0037s0122 [PTHR12777] SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2; [KOG3459] Small nuclear ribonucleoprotein (snRNP) Sm core protein; [GO:0030532] small nuclear ribonucleoprotein complex; [K11096] small nuclear ribonucleoprotein D2; [PF01423] LSM domain; [GO:0008380] RNA splicing36.740.8259
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