Guide Gene

Gene ID
Mapoly0009s0221
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0051603] proteolysis involved in cellular protein catabolic process; [K02735] 20S proteasome subunit beta 3 [EC:3.4.25.1]; [KOG0180] 20S proteasome, regulatory subunit beta type PSMB3/PUP3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0009s0221 [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02735] 20S proteasome subunit beta 3 [EC:3.4.25.1]; [KOG0180] 20S proteasome, regulatory subunit beta type PSMB3/PUP3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA 0.00 1.0000
1 Mapoly0021s0078 [KOG0175] 20S proteasome, regulatory subunit beta type PSMB5/PSMB8/PRE2; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [K02737] 20S proteasome subunit beta 5 [EC:3.4.25.1]; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA; [PTHR11599:SF3] PROTEASOME SUBUNIT BETA TYPE 5,81.000.9073
2 Mapoly0014s0216 [PF10602] 26S proteasome subunit RPN7; [GO:0005515] protein binding; [K03037] 26S proteasome regulatory subunit N7; [PTHR14145:SF1] 26S PROTEASOME NON-ATPASE REGULATORY SUBUNIT 6; [KOG0687] 26S proteasome regulatory complex, subunit RPN7/PSMD6; [PTHR14145] 26S PROTESOME SUBUNIT 6; [PF01399] PCI domain2.450.8798
3 Mapoly0052s0023 [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02736] 20S proteasome subunit beta 7 [EC:3.4.25.1]; [PTHR11599:SF5] PROTEASOME SUBUNIT BETA TYPE 4; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [KOG0185] 20S proteasome, regulatory subunit beta type PSMB4/PRE4; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA2.830.8918
4 Mapoly0006s0079 [K04798] prefoldin beta subunit; [GO:0016272] prefoldin complex; [PTHR21431] PREFOLDIN SUBUNIT 6; [PTHR21431:SF0] SUBFAMILY NOT NAMED; [GO:0006457] protein folding; [KOG3478] Prefoldin subunit 6, KE2 family; [GO:0051082] unfolded protein binding; [PF01920] Prefoldin subunit4.900.8752
5 Mapoly0032s0045 [KOG3392] Exon-exon junction complex, Magoh component; [K12877] protein mago nashi; [GO:0005634] nucleus; [PF02792] Mago nashi protein; [PTHR12638] FAMILY NOT NAMED5.000.8805
6 Mapoly0004s0033 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR11599:SF16] PROTEASOME SUBUNIT ALPHA TYPE 2; [KOG0181] 20S proteasome, regulatory subunit alpha type PSMA2/PRE8; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [K02726] 20S proteasome subunit alpha 2 [EC:3.4.25.1]; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA5.480.8896
7 Mapoly0044s0041 [K02734] 20S proteasome subunit beta 4 [EC:3.4.25.1]; [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF6] PROTEASOME SUBUNIT BETA TYPE 2; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [KOG0177] 20S proteasome, regulatory subunit beta type PSMB2/PRE1; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA6.630.8809
8 Mapoly0001s0403 [K12832] splicing factor 3B subunit 5; [PF07189] Splicing factor 3B subunit 10 (SF3b10); [PTHR20978:SF0] SUBFAMILY NOT NAMED; [KOG3485] Uncharacterized conserved protein; [PTHR20978] FAMILY NOT NAMED6.930.8599
9 Mapoly0019s0015 [GO:0051603] proteolysis involved in cellular protein catabolic process; [K02732] 20S proteasome subunit beta 6 [EC:3.4.25.1]; [GO:0004298] threonine-type endopeptidase activity; [KOG0179] 20S proteasome, regulatory subunit beta type PSMB1/PRE7; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA7.480.8445
10 Mapoly0016s0054 [K12624] U6 snRNA-associated Sm-like protein LSm5; [PTHR20971] U6 SNRNA-ASSOCIATED PROTEIN; [KOG1775] U6 snRNA-associated Sm-like protein; [PF01423] LSM domain7.750.8622
11 Mapoly0053s0095 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF15] PROTEASOME SUBUNIT ALPHA TYPE 7; [KOG0183] 20S proteasome, regulatory subunit alpha type PSMA7/PRE6; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [K02731] 20S proteasome subunit alpha 4 [EC:3.4.25.1]; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA8.720.8251
12 Mapoly0021s0070 -10.100.8354
13 Mapoly0005s0254 [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0173] 20S proteasome, regulatory subunit beta type PSMB7/PSMB10/PUP1; [PTHR11599:SF44] SUBFAMILY NOT NAMED; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [K02739] 20S proteasome subunit beta 2 [EC:3.4.25.1]; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA10.250.8199
14 Mapoly0001s0158 [GO:0005737] cytoplasm; [PF02544] 3-oxo-5-alpha-steroid 4-dehydrogenase; [1.3.1.-] With NAD(+) or NADP(+) as acceptor.; [GO:0016021] integral to membrane; [K10258] enoyl reductase [EC:1.3.1.-]; [GO:0016627] oxidoreductase activity, acting on the CH-CH group of donors; [PTHR10556:SF28] ENOYL REDUCTASE TSC13-RELATED; [KOG1639] Steroid reductase required for elongation of the very long chain fatty acids; [PTHR10556] 3-OXO-5-ALPHA-STEROID 4-DEHYDROGENASE; [GO:0006629] lipid metabolic process10.820.7741
15 Mapoly0073s0035 [PTHR12828:SF3] PROTEASOME MATURATION PROTEIN (UMP1); [K11599] proteasome maturation protein; [PF05348] Proteasome maturation factor UMP1; [KOG3061] Proteasome maturation factor; [PTHR12828] PROTEASOME MATURATION PROTEIN (UMP1)11.220.8796
16 Mapoly0006s0307 [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0051603] proteolysis involved in cellular protein catabolic process; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [K02730] 20S proteasome subunit alpha 1 [EC:3.4.25.1]; [KOG0182] 20S proteasome, regulatory subunit alpha type PSMA6/SCL1; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [PTHR11599:SF11] PROTEASOME SUBUNIT ALPHA TYPE 6; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA12.370.8668
17 Mapoly0127s0039 [KOG1774] Small nuclear ribonucleoprotein E; [GO:0005681] spliceosomal complex; [K11097] small nuclear ribonucleoprotein E; [GO:0000398] mRNA splicing, via spliceosome; [PTHR11193] SMALL NUCLEAR RIBONUCLEOPROTEIN E; [PTHR11193:SF0] SMALL NUCLEAR RIBONUCLEOPROTEIN E; [PF01423] LSM domain15.300.8555
18 Mapoly0002s0013 [GO:0030833] regulation of actin filament polymerization; [GO:0034314] Arp2/3 complex-mediated actin nucleation; [PF04062] ARP2/3 complex ARPC3 (21 kDa) subunit; [PTHR12391] ARP2/3 COMPLEX 21 KD SUBUNIT; [GO:0005856] cytoskeleton; [GO:0005885] Arp2/3 protein complex; [KOG3155] Actin-related protein Arp2/3 complex, subunit ARPC3; [K05756] actin related protein 2/3 complex, subunit 317.150.7533
19 Mapoly0016s0041 [GO:0051603] proteolysis involved in cellular protein catabolic process; [PTHR11599:SF4] PROTEASOME SUBUNIT BETA TYPE 6,9; [K02738] 20S proteasome subunit beta 1 [EC:3.4.25.1]; [KOG0174] 20S proteasome, regulatory subunit beta type PSMB6/PSMB9/PRE3; [GO:0004298] threonine-type endopeptidase activity; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA17.860.8610
20 Mapoly0164s0021 [PF09597] IGR protein motif18.710.8038
21 Mapoly0080s0084 [GO:0019773] proteasome core complex, alpha-subunit complex; [PTHR11599:SF14] PROTEASOME SUBUNIT ALPHA TYPE 5; [GO:0051603] proteolysis involved in cellular protein catabolic process; [KOG0176] 20S proteasome, regulatory subunit alpha type PSMA5/PUP2; [GO:0006511] ubiquitin-dependent protein catabolic process; [GO:0004175] endopeptidase activity; [GO:0004298] threonine-type endopeptidase activity; [PF10584] Proteasome subunit A N-terminal signature; [K02729] 20S proteasome subunit alpha 5 [EC:3.4.25.1]; [GO:0005839] proteasome core complex; [PF00227] Proteasome subunit; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA19.440.7490
22 Mapoly0216s0010 [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [PTHR11064] CCAAT-BINDING TRANSCRIPTION FACTOR-RELATED; [GO:0005622] intracellular; [KOG0869] CCAAT-binding factor, subunit A (HAP3)19.800.8016
23 Mapoly0039s0076 [PF04756] OST3 / OST6 family; [KOG3356] Predicted membrane protein; [PTHR13160] FAMILY NOT NAMED22.800.8238
24 Mapoly0086s0082 [KOG3391] Transcriptional co-repressor component; [PF06487] Sin3 associated polypeptide p18 (SAP18); [K14324] histone deacetylase complex subunit SAP18; [PTHR13082] SAP1826.320.7882
25 Mapoly0042s0050 [PF05486] Signal recognition particle 9 kDa protein (SRP9); [GO:0048500] signal recognition particle; [GO:0045900] negative regulation of translational elongation; [GO:0008312] 7S RNA binding; [K03109] signal recognition particle subunit SRP9; [GO:0006614] SRP-dependent cotranslational protein targeting to membrane; [PTHR12834] SIGNAL RECOGNITION PARTICLE 9 KDA PROTEIN; [KOG3465] Signal recognition particle, subunit Srp926.610.7466
26 Mapoly0005s0207 -26.980.8026
27 Mapoly0046s0003 [GO:0004579] dolichyl-diphosphooligosaccharide-protein glycotransferase activity; [PF02109] DAD family; [GO:0008250] oligosaccharyltransferase complex; [GO:0016021] integral to membrane; [KOG1746] Defender against cell death protein/oligosaccharyltransferase, epsilon subunit; [PTHR10705] DOLICHYL-DIPHOSPHOOLIGOSACCHARIDE--PROTEIN GLYCOSYLTRANSFERASE SUBUNIT DAD1; [K12668] oligosaccharyltransferase complex subunit epsilon27.110.8377
28 Mapoly0003s0235 [PTHR13636] UNCHARACTERIZED; [PF05251] Uncharacterised protein family (UPF0197); [KOG4452] Predicted membrane protein27.820.8273
29 Mapoly0014s0111 [PTHR32001] FAMILY NOT NAMED; [KOG4615] Uncharacterized conserved protein; [PF09775] Keratinocyte-associated protein 228.530.8136
30 Mapoly0138s0028 -30.460.7958
31 Mapoly0001s0018 [GO:0004175] endopeptidase activity; [K02728] 20S proteasome subunit alpha 3 [EC:3.4.25.1]; [GO:0019773] proteasome core complex, alpha-subunit complex; [GO:0004298] threonine-type endopeptidase activity; [GO:0051603] proteolysis involved in cellular protein catabolic process; [PF10584] Proteasome subunit A N-terminal signature; [GO:0005839] proteasome core complex; [KOG0178] 20S proteasome, regulatory subunit alpha type PSMA4/PRE9; [PF00227] Proteasome subunit; [GO:0006511] ubiquitin-dependent protein catabolic process; [PTHR11599:SF13] PROTEASOME SUBUNIT ALPHA TYPE 4; [3.4.25.1] Proteasome endopeptidase complex.; [PTHR11599] PROTEASOME SUBUNIT ALPHA/BETA31.240.8364
32 Mapoly0006s0106 [PF04051] Transport protein particle (TRAPP) component; [KOG3330] Transport protein particle (TRAPP) complex subunit; [PTHR13048] TRAFFICKING PROTEIN PARTICLE COMPLEX SUBUNIT 333.360.6815
33 Mapoly0037s0122 [PTHR12777] SMALL NUCLEAR RIBONUCLEOPROTEIN SM D2; [KOG3459] Small nuclear ribonucleoprotein (snRNP) Sm core protein; [GO:0030532] small nuclear ribonucleoprotein complex; [K11096] small nuclear ribonucleoprotein D2; [PF01423] LSM domain; [GO:0008380] RNA splicing33.570.8098
34 Mapoly0064s0055 [PF13656] RNA polymerase Rpb3/Rpb11 dimerisation domain; [K03008] DNA-directed RNA polymerase II subunit RPB11; [PTHR13946] DNA-DIRECTED RNA POLYMERASE I,II,III; [KOG4392] RNA polymerase, subunit L34.990.8087
35 Mapoly0027s0032 -38.960.7423
36 Mapoly0029s0049 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0016602] CCAAT-binding factor complex; [KOG1657] CCAAT-binding factor, subunit C (HAP5); [GO:0043565] sequence-specific DNA binding; [PF00808] Histone-like transcription factor (CBF/NF-Y) and archaeal histone; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR10252:SF8] TRANSCRIPTIONAL ACTIVATOR HAP5; [GO:0005622] intracellular; [PTHR10252] HISTONE-LIKE TRANSCRIPTION FACTOR CCAAT-RELATED43.860.7762
37 Mapoly0011s0153 [PTHR21181] FAMILY NOT NAMED; [KOG3918] Predicted membrane protein; [PF10270] Membrane magnesium transporter43.950.7258
38 Mapoly0043s0111 [GO:0016021] integral to membrane; [PF01679] Proteolipid membrane potential modulator; [PTHR21659] HYDROPHOBIC PROTEIN RCI2 (LOW TEMPERATURE AND SALT RESPONSIVE PROTEIN LTI6)-RELATED; [KOG1773] Stress responsive protein45.560.6742
39 Mapoly0019s0069 [PF06552] Plant specific mitochondrial import receptor subunit TOM20; [PTHR32409] FAMILY NOT NAMED; [GO:0045040] protein import into mitochondrial outer membrane; [GO:0005742] mitochondrial outer membrane translocase complex46.150.7924
40 Mapoly0029s0150 [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0417] Ubiquitin-protein ligase; [K10689] peroxin-4 [EC:6.3.2.19]; [PTHR24067:SF56] UBIQUITIN CARRIER PROTEIN; [PF00179] Ubiquitin-conjugating enzyme46.600.6702
41 Mapoly0087s0020 [KOG1781] Small Nuclear ribonucleoprotein splicing factor; [K12626] U6 snRNA-associated Sm-like protein LSm7; [PF01423] LSM domain; [PTHR10553] SMALL NUCLEAR RIBONUCLEOPROTEIN46.770.8018
42 Mapoly0029s0061 [GO:0016020] membrane; [PF01956] Integral membrane protein DUF106; [PTHR13116] UNCHARACTERIZED; [KOG3188] Uncharacterized conserved protein46.830.7512
43 Mapoly0016s0005 [GO:0008565] protein transporter activity; [PTHR11753] CLATHRIN COAT ASSEMBLY PROTEIN; [KOG0934] Clathrin adaptor complex, small subunit; [K12403] AP-4 complex subunit sigma-1; [GO:0015031] protein transport; [PF01217] Clathrin adaptor complex small chain46.910.7890
44 Mapoly0033s0089 [PF03918] Cytochrome C biogenesis protein47.010.7427
45 Mapoly0014s0106 [KOG3172] Small nuclear ribonucleoprotein Sm D3; [PTHR23338] SMALL NUCLEAR RIBONUCLEOPROTEIN SM; [PF01423] LSM domain49.480.7874
46 Mapoly0041s0007 [GO:0016272] prefoldin complex; [PF02996] Prefoldin subunit; [KOG3048] Molecular chaperone Prefoldin, subunit 5; [GO:0006457] protein folding; [PTHR12674] PREFOLDIN SUBUNIT 5; [GO:0051082] unfolded protein binding; [K04797] prefoldin alpha subunit49.840.7819
47 Mapoly0080s0042 [K14004] protein transport protein SEC13; [KOG1332] Vesicle coat complex COPII, subunit SEC13; [PTHR11024] PROTEIN TRANSPORT PROTEIN SEC13-RELATED; [GO:0005515] protein binding; [PF00400] WD domain, G-beta repeat49.960.7148
48 Mapoly0030s0026 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PTHR11545:SF6] MITOCHONDRIAL RIBOSOMAL PROTEIN L13; [KOG3203] Mitochondrial/chloroplast ribosomal protein L13; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13; [K02871] large subunit ribosomal protein L1351.060.7306
49 Mapoly0146s0027 [GO:0016020] membrane; [KOG3358] Uncharacterized secreted protein SDF2 (Stromal cell-derived factor 2), contains MIR domains; [PTHR10050] DOLICHYL-PHOSPHATE-MANNOSE--PROTEIN MANNOSYLTRANSFERASE; [PF02815] MIR domain53.240.7295
50 Mapoly0073s0081 [K11876] proteasome assembly chaperone 2; [KOG3112] Uncharacterized conserved protein; [PF09754] PAC2 family; [PTHR12970] TUMOR NECROSIS FACTOR SUPERFAMILY, MEMBER 5-INDUCED PROTEIN 1 (CLAST3)53.390.7519
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