Guide Gene

Gene ID
Mapoly0008s0084
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[K12622] U6 snRNA-associated Sm-like protein LSm3; [PTHR13110] U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3; [KOG3460] Small nuclear ribonucleoprotein (snRNP) LSM3; [PF01423] LSM domain

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0008s0084 [K12622] U6 snRNA-associated Sm-like protein LSm3; [PTHR13110] U6 SNRNA-ASSOCIATED SM-LIKE PROTEIN LSM3; [KOG3460] Small nuclear ribonucleoprotein (snRNP) LSM3; [PF01423] LSM domain 0.00 1.0000
1 Mapoly0124s0040 [K12625] U6 snRNA-associated Sm-like protein LSm6; [KOG1783] Small nuclear ribonucleoprotein F; [PTHR11021] SMALL NUCLEAR RIBONUCLEOPROTEIN F (SNRNP-F); [PTHR11021:SF1] SMALL NUCLEAR RIBONUCLEOPROTEIN; [PF01423] LSM domain1.730.7408
2 Mapoly0055s0070 -2.650.7814
3 Mapoly0075s0084 -4.240.7221
4 Mapoly0107s0018 [GO:0015035] protein disulfide oxidoreductase activity; [PTHR13887] GLUTATHIONE S-TRANSFERASE KAPPA; [PF01323] DSBA-like thioredoxin domain9.950.7181
5 Mapoly0004s0020 [PTHR13180] SMALL MEMBRANE PROTEIN-RELATED; [KOG3393] Predicted membrane protein; [PF05255] Uncharacterised protein family (UPF0220)11.830.7402
6 Mapoly0158s0026 [PF08547] Complex I intermediate-associated protein 30 (CIA30); [PTHR13194] COMPLEX I INTERMEDIATE-ASSOCIATED PROTEIN 3011.960.7126
7 Mapoly0013s0162 [GO:0005515] protein binding; [PF02201] SWIB/MDM2 domain; [PTHR13844] BRG-1 ASSOCIATED FACTOR 60 (BAF60)12.490.7468
8 Mapoly0011s0105 [PTHR21242] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [GO:0006352] DNA-dependent transcription, initiation; [PTHR21242:SF0] TRANSCRIPTION INITIATION FACTOR TFIID SUBUNIT 10; [K03134] transcription initiation factor TFIID subunit 10; [GO:0005634] nucleus; [PF03540] Transcription initiation factor TFIID 23-30kDa subunit15.170.7348
9 Mapoly0052s0099 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [PTHR21428] FAMILY NOT NAMED; [GO:0016592] mediator complex; [GO:0001104] RNA polymerase II transcription cofactor activity; [PF05983] MED7 protein; [KOG0570] Transcriptional coactivator17.320.6459
10 Mapoly0109s0026 [GO:0005515] protein binding; [KOG1446] Histone H3 (Lys4) methyltransferase complex and RNA cleavage factor II complex, subunit SWD2; [PTHR19861] WD40 REPEAT PROTEIN SWD2; [PF00400] WD domain, G-beta repeat19.800.7090
11 Mapoly0033s0142 -20.050.7336
12 Mapoly0054s0132 [GO:0003677] DNA binding; [K03007] DNA-directed RNA polymerases I, II, and III subunit RPABC5; [PF01194] RNA polymerases N / 8 kDa subunit; [GO:0006351] transcription, DNA-dependent; [KOG3497] DNA-directed RNA polymerase, subunit RPB10; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR23413] 60S RIBOSOMAL PROTEIN L32 AND DNA-DIRECTED RNA POLYMERASE II, SUBUNIT N20.740.7181
13 Mapoly0061s0071 -20.980.7224
14 Mapoly0061s0117 -22.650.6997
15 Mapoly0006s0079 [K04798] prefoldin beta subunit; [GO:0016272] prefoldin complex; [PTHR21431] PREFOLDIN SUBUNIT 6; [PTHR21431:SF0] SUBFAMILY NOT NAMED; [GO:0006457] protein folding; [KOG3478] Prefoldin subunit 6, KE2 family; [GO:0051082] unfolded protein binding; [PF01920] Prefoldin subunit24.250.7257
16 Mapoly0032s0009 [PTHR21338] MITOCHONDRIAL RIBOSOMAL PROTEIN L41; [PF09809] Mitochondrial ribosomal protein L2729.390.6741
17 Mapoly0040s0029 [PTHR22840] FAMILY NOT NAMED; [GO:0005515] protein binding; [KOG2444] WD40 repeat protein; [PF00400] WD domain, G-beta repeat34.410.6297
18 Mapoly0002s0066 [GO:0006260] DNA replication; [GO:0005634] nucleus; [PF04081] DNA polymerase delta, subunit 4; [PTHR14303] DNA POLYMERASE DELTA SUBUNIT 4; [K03505] DNA polymerase delta subunit 436.410.6455
19 Mapoly0001s0403 [K12832] splicing factor 3B subunit 5; [PF07189] Splicing factor 3B subunit 10 (SF3b10); [PTHR20978:SF0] SUBFAMILY NOT NAMED; [KOG3485] Uncharacterized conserved protein; [PTHR20978] FAMILY NOT NAMED38.110.7127
20 Mapoly0002s0003 -39.340.6622
21 Mapoly0076s0047 [GO:0008124] 4-alpha-hydroxytetrahydrobiopterin dehydratase activity; [KOG4073] Pterin carbinolamine dehydratase PCBD/dimerization cofactor of HNF1; [GO:0006729] tetrahydrobiopterin biosynthetic process; [PTHR12599] PTERIN-4-ALPHA-CARBINOLAMINE DEHYDRATASE; [PF01329] Pterin 4 alpha carbinolamine dehydratase39.570.6708
22 Mapoly0058s0062 [GO:0032502] developmental process; [PF00022] Actin; [GO:0005634] nucleus; [GO:0006325] chromatin organization; [PTHR11937] ACTIN; [KOG0676] Actin and related proteins41.890.5911
23 Mapoly0207s0011 [KOG0114] Predicted RNA-binding protein (RRM superfamily); [PTHR22630:SF0] SUBFAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [K12833] pre-mRNA branch site protein p14; [PTHR22630] PRE-MRNA BRANCH SITE PROTEIN; [PF00076] RNA recognition motif. (a.k.a. RRM, RBD, or RNP domain)42.130.6794
24 Mapoly0030s0026 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [PTHR11545:SF6] MITOCHONDRIAL RIBOSOMAL PROTEIN L13; [KOG3203] Mitochondrial/chloroplast ribosomal protein L13; [PTHR11545] RIBOSOMAL PROTEIN L13; [GO:0006412] translation; [PF00572] Ribosomal protein L13; [K02871] large subunit ribosomal protein L1347.900.6696
25 Mapoly0043s0113 [KOG4771] Nucleolar protein (NOP16) involved in 60S ribosomal subunit biogenesis; [PTHR13243] HSPC111 PROTEIN-RELATED; [PF09420] Ribosome biogenesis protein Nop1650.280.7062
26 Mapoly0029s0150 [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [KOG0417] Ubiquitin-protein ligase; [K10689] peroxin-4 [EC:6.3.2.19]; [PTHR24067:SF56] UBIQUITIN CARRIER PROTEIN; [PF00179] Ubiquitin-conjugating enzyme52.580.6258
27 Mapoly0086s0082 [KOG3391] Transcriptional co-repressor component; [PF06487] Sin3 associated polypeptide p18 (SAP18); [K14324] histone deacetylase complex subunit SAP18; [PTHR13082] SAP1854.660.7001
28 Mapoly0088s0028 [PTHR13675] FAMILY NOT NAMED; [PF05347] Complex 1 protein (LYR family)56.530.6489
29 Mapoly0009s0146 -56.870.6462
30 Mapoly0083s0065 [PF09366] Protein of unknown function (DUF1997)61.610.6453
31 Mapoly0030s0014 [GO:0005515] protein binding; [KOG0277] Peroxisomal targeting signal type 2 receptor; [K13341] peroxin-7; [PTHR22850] WD40 REPEAT FAMILY; [PF00400] WD domain, G-beta repeat62.210.6503
32 Mapoly0048s0106 -63.100.6808
33 Mapoly0023s0087 [PF14966] DNA repair REX1-B65.270.6311
34 Mapoly0019s0069 [PF06552] Plant specific mitochondrial import receptor subunit TOM20; [PTHR32409] FAMILY NOT NAMED; [GO:0045040] protein import into mitochondrial outer membrane; [GO:0005742] mitochondrial outer membrane translocase complex65.500.7071
35 Mapoly0075s0049 -65.880.6313
36 Mapoly0141s0006 -68.990.6651
37 Mapoly0161s0025 -69.360.7046
38 Mapoly0112s0015 [PTHR12373] ENHANCER OF RUDIMENTARY ERH; [PF01133] Enhancer of rudimentary; [KOG1766] Enhancer of rudimentary; [GO:0007049] cell cycle69.410.6658
39 Mapoly0081s0079 [PTHR13305:SF0] SUBFAMILY NOT NAMED; [GO:0001522] pseudouridine synthesis; [GO:0042254] ribosome biogenesis; [PTHR13305] RIBOSOME BIOGENESIS PROTEIN NOP10; [GO:0030515] snoRNA binding; [KOG3503] H/ACA snoRNP complex, subunit NOP10; [K11130] H/ACA ribonucleoprotein complex subunit 3; [PF04135] Nucleolar RNA-binding protein, Nop10p family; [GO:0072588] box H/ACA RNP complex70.810.6808
40 Mapoly0175s0017 -72.000.6486
41 Mapoly0042s0122 [K03609] septum site-determining protein MinD; [PTHR13696:SF1] SUBFAMILY NOT NAMED; [KOG3022] Predicted ATPase, nucleotide-binding; [PTHR13696] FAMILY NOT NAMED; [PF01656] CobQ/CobB/MinD/ParA nucleotide binding domain73.080.6047
42 Mapoly0003s0100 [PF09430] Protein of unknown function (DUF2012); [KOG3306] Predicted membrane protein; [PTHR13605] UNCHARACTERIZED75.100.6800
43 Mapoly0164s0021 [PF09597] IGR protein motif75.300.6707
44 Mapoly0027s0032 -75.660.6449
45 Mapoly0026s0092 [PTHR24193] ANKYRIN REPEAT PROTEIN; [KOG4214] Myotrophin and similar proteins; [PF12796] Ankyrin repeats (3 copies)77.590.6966
46 Mapoly0058s0042 [PF00327] Ribosomal protein L30p/L7e; [K02907] large subunit ribosomal protein L30; [PTHR15892] MITOCHONDRIAL RIBOSOMAL PROTEIN L3078.440.6963
47 Mapoly0072s0021 [GO:0015035] protein disulfide oxidoreductase activity; [GO:0045454] cell redox homeostasis; [PF00085] Thioredoxin; [GO:0006662] glycerol ether metabolic process; [KOG0907] Thioredoxin; [PTHR10438] THIOREDOXIN78.780.6053
48 Mapoly0012s0137 [PTHR23027:SF2] gb def: Predicted protein; [PTHR23027] UNCHARACTERIZED; [GO:0005739] mitochondrion; [PF02297] Cytochrome oxidase c subunit VIb; [GO:0004129] cytochrome-c oxidase activity81.190.6688
49 Mapoly0012s0096 -81.390.6143
50 Mapoly0014s0146 [GO:0008233] peptidase activity; [KOG3372] Signal peptidase complex subunit; [GO:0006465] signal peptide processing; [GO:0016021] integral to membrane; [PF04573] Signal peptidase subunit; [GO:0005787] signal peptidase complex; [3.4.-.-] Acting on peptide bonds (peptide hydrolases).; [K12948] signal peptidase complex subunit 3 [EC:3.4.-.-]; [PTHR12804] MICROSOMAL SIGNAL PEPTIDASE 23 KD SUBUNIT (SPC22/23)82.610.6571
Showing 1 to 50 of 200 records
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