Guide Gene

Gene ID
Mapoly0108s0064
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0108s0064 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding 0.00 1.0000
1 Mapoly0051s0108 [PF11152] Protein of unknown function (DUF2930)1.000.8479
2 Mapoly0006s0234 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3949] RNA polymerase II elongator complex, subunit ELP4; [PTHR12896:SF1] gb def: elongator protein 4, 50kd subunit, elp4p [saccharomyces cerevisiae]; [PTHR12896] PAX6 NEIGHBOR PROTEIN (PAXNEB); [PF05625] PAXNEB protein; [GO:0033588] Elongator holoenzyme complex; [K11375] elongator complex protein 41.410.8235
3 Mapoly0090s0037 [PTHR15561:SF0] SUBFAMILY NOT NAMED; [KOG4168] Predicted RNA polymerase III subunit C17; [PTHR15561] CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN; [PF03874] RNA polymerase Rpb4; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity2.240.7903
4 Mapoly0062s0062 [KOG2382] Predicted alpha/beta hydrolase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family4.240.8099
5 Mapoly0052s0120 [K06664] peroxin-2; [PTHR12590:SF3] SUBFAMILY NOT NAMED; [KOG2879] Predicted E3 ubiquitin ligase; [PF04757] Pex2 / Pex12 amino terminal region; [PTHR12590] PEROXISOMAL PROTEIN RELATED5.920.7746
6 Mapoly0004s0017 -6.000.7857
7 Mapoly0003s0036 -6.240.7473
8 Mapoly0005s0033 [PTHR12695] GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2; [GO:0006289] nucleotide-excision repair; [PTHR12695:SF2] GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2; [PF07975] TFIIH C1-like domain; [GO:0008270] zinc ion binding; [GO:0006281] DNA repair; [GO:0006351] transcription, DNA-dependent; [GO:0000439] core TFIIH complex; [KOG2807] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1; [PF04056] Ssl1-like; [K03142] transcription initiation factor TFIIH subunit 210.390.8077
9 Mapoly0001s0471 [PTHR22936:SF2] gb def: Hypothetical protein; [GO:0016021] integral to membrane; [GO:0004252] serine-type endopeptidase activity; [PF01694] Rhomboid family; [PTHR22936] RHOMBOID-RELATED; [GO:0006508] proteolysis10.680.7334
10 Mapoly0151s0012 [PF12937] F-box-like; [GO:0005515] protein binding; [PTHR12874] FAMILY NOT NAMED; [K10295] F-box protein 9; [KOG2997] F-box protein FBX9; [PTHR12874:SF9] SUBFAMILY NOT NAMED12.650.7443
11 Mapoly0136s0020 [PTHR23290] UNCHARACTERIZED; [PF13659] Methyltransferase domain; [KOG3420] Predicted RNA methylase; [K07579] putative methylase14.140.7181
12 Mapoly0122s0047 [PTHR18829:SF0] SUBFAMILY NOT NAMED; [PTHR18829] FAMILY NOT NAMED; [PF09811] Essential protein Yae1, N terminal15.100.7500
13 Mapoly0001s0511 -15.200.7294
14 Mapoly0135s0030 -17.970.7432
15 Mapoly0067s0098 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase18.030.6791
16 Mapoly0132s0009 -18.710.7462
17 Mapoly0019s0039 [K01409] O-sialoglycoprotein endopeptidase [EC:3.4.24.57]; [PF00814] Glycoprotease family; [KOG2707] Predicted metalloprotease with chaperone activity (RNAse H/HSP70 fold); [PTHR11735] O-SIALOGLYCOPROTEIN ENDOPEPTIDASE; [3.4.24.57] O-sialoglycoprotein endopeptidase.18.760.7588
18 Mapoly0006s0297 [KOG3377] Uncharacterized conserved protein; [PF05811] Eukaryotic protein of unknown function (DUF842); [PTHR21096] UNCHARACTERIZED19.080.7160
19 Mapoly0016s0028 [K13118] protein DGCR14; [KOG2627] Nuclear protein ES2; [PTHR12940] ES-2 PROTEIN - RELATED; [PF09751] Nuclear protein Es219.210.7647
20 Mapoly0015s0082 [PF01713] Smr domain; [PTHR13308] UNCHARACTERIZED; [PF08590] Domain of unknown function (DUF1771)20.000.7688
21 Mapoly0010s0195 [KOG4214] Myotrophin and similar proteins; [PTHR24188] ANKYRIN REPEAT PROTEIN; [PF12796] Ankyrin repeats (3 copies)21.210.7627
22 Mapoly0007s0150 [PTHR12806:SF0] SUBFAMILY NOT NAMED; [K12188] ESCRT-II complex subunit VPS22; [PF04157] EAP30/Vps36 family; [KOG3341] RNA polymerase II transcription factor complex subunit; [PTHR12806] EAP30 SUBUNIT OF ELL COMPLEX23.690.7111
23 Mapoly0001s0293 [PTHR23106] FAMILY NOT NAMED; [PF01585] G-patch domain; [GO:0003676] nucleic acid binding24.330.7077
24 Mapoly0047s0020 [PF03226] Yippee zinc-binding/DNA-binding /Mis18, centromere assembly; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG3399] Predicted Yippee-type zinc-binding protein24.450.7179
25 Mapoly0008s0100 -24.740.7085
26 Mapoly0027s0128 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [PTHR10302:SF0] SINGLE-STRANDED DNA-BINDING PROTEIN; [PF00436] Single-strand binding protein family25.920.7207
27 Mapoly0218s0008 -26.150.7380
28 Mapoly0014s0078 [PF13445] RING-type zinc-finger; [PTHR13139] RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN28.580.6999
29 Mapoly0056s0050 [PF00295] Glycosyl hydrolases family 28; [GO:0004650] polygalacturonase activity; [GO:0005975] carbohydrate metabolic process; [PTHR31339] FAMILY NOT NAMED; [PTHR31339:SF0] SUBFAMILY NOT NAMED28.620.6797
30 Mapoly0033s0037 [PF00782] Dual specificity phosphatase, catalytic domain; [GO:0006470] protein dephosphorylation; [KOG1716] Dual specificity phosphatase; [PTHR10159] DUAL SPECIFICITY PROTEIN PHOSPHATASE; [GO:0008138] protein tyrosine/serine/threonine phosphatase activity29.120.6887
31 Mapoly0136s0033 -29.390.7165
32 Mapoly0015s0032 [PF13516] Leucine Rich repeat; [PTHR23125] F-BOX/LEUCINE RICH REPEAT PROTEIN34.210.7021
33 Mapoly0129s0019 [GO:0005737] cytoplasm; [PTHR11933] TRNA (5-METHYLAMINOMETHYL-2-THIOURIDYLATE)-METHYLTRANSFERASE; [PF03054] tRNA methyl transferase; [GO:0008033] tRNA processing; [GO:0016740] transferase activity; [2.8.1.-] Sulfurtransferases.; [K00566] tRNA-specific 2-thiouridylase [EC:2.8.1.-]; [KOG2805] tRNA (5-methylaminomethyl-2-thiouridylate)-methyltransferase34.210.6597
34 Mapoly0188s0014 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0750] Mitochondrial solute carrier protein34.580.6970
35 Mapoly0059s0058 [PF01541] GIY-YIG catalytic domain; [PTHR20208] FAMILY NOT NAMED37.700.6934
36 Mapoly0085s0073 [GO:0005840] ribosome; [PF00861] Ribosomal L18p/L5e family; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PTHR12899] 39S RIBOSOMAL PROTEIN L18, MITOCHONDRIAL; [GO:0006412] translation37.790.6630
37 Mapoly0036s0053 [KOG3355] Mitochondrial sulfhydryl oxidase involved in the biogenesis of cytosolic Fe/S proteins; [GO:0016972] thiol oxidase activity; [GO:0055114] oxidation-reduction process; [PTHR12645] ALR/ERV; [PF04777] Erv1 / Alr family38.470.7333
38 Mapoly0038s0099 [PTHR15664] C20ORF30 PROTEIN; [PF05915] Eukaryotic protein of unknown function (DUF872); [PTHR15664:SF1] SUBFAMILY NOT NAMED; [KOG4753] Predicted membrane protein39.240.6853
39 Mapoly0001s0443 [GO:0007264] small GTPase mediated signal transduction; [K07890] Ras-related protein Rab-21; [PTHR24073] FAMILY NOT NAMED; [KOG0088] GTPase Rab21, small G protein superfamily; [PF00071] Ras family; [GO:0005525] GTP binding; [PTHR24073:SF8] SUBFAMILY NOT NAMED39.690.7448
40 Mapoly0093s0007 [GO:0016020] membrane; [GO:0008137] NADH dehydrogenase (ubiquinone) activity; [PTHR12910] NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.2; [GO:0009055] electron carrier activity; [PF05071] NADH ubiquinone oxidoreductase subunit NDUFA12; [PTHR12910:SF1] NADH-UBIQUINONE OXIDOREDUCTASE SUBUNIT B17.240.640.6421
41 Mapoly0030s0134 [GO:0006378] mRNA polyadenylation; [GO:0005849] mRNA cleavage factor complex; [PF13869] Nucleotide hydrolase; [GO:0003729] mRNA binding; [PTHR13047] PRE-MRNA CLEAVAGE FACTOR IM, 25KD SUBUNIT42.400.6827
42 Mapoly0058s0027 [PF03878] YIF1; [KOG3094] Predicted membrane protein; [PTHR14083] YIP1 INTERACTING FACTOR HOMOLOG (YIF1 PROTEIN)43.470.7149
43 Mapoly0022s0095 [GO:0006355] regulation of transcription, DNA-dependent; [GO:0043565] sequence-specific DNA binding; [GO:0003700] sequence-specific DNA binding transcription factor activity; [PTHR22952] CAMP-RESPONSE ELEMENT BINDING PROTEIN-RELATED; [PF00170] bZIP transcription factor45.000.6970
44 Mapoly0102s0013 [PTHR12262] UNCHARACTERIZED; [KOG3036] Protein involved in cell differentiation/sexual development; [PF04078] Cell differentiation family, Rcd1-like; [K12606] CCR4-NOT transcription complex subunit 945.300.6706
45 Mapoly0098s0021 [PF09446] VMA21-like domain; [PTHR31792] FAMILY NOT NAMED46.480.6815
46 Mapoly0102s0032 -49.800.7115
47 Mapoly0066s0028 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain51.090.7159
48 Mapoly0001s0402 [PF09991] Predicted membrane protein (DUF2232)52.800.7012
49 Mapoly0051s0044 -53.120.7100
50 Mapoly0118s0004 [PF14770] Transmembrane protein 18; [PTHR22593] FAMILY NOT NAMED53.890.6784
Showing 1 to 50 of 200 records
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