Guide Gene

Gene ID
Mapoly0014s0078
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PF13445] RING-type zinc-finger; [PTHR13139] RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0014s0078 [PF13445] RING-type zinc-finger; [PTHR13139] RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN 0.00 1.0000
1 Mapoly0136s0033 -2.650.7838
2 Mapoly0161s0003 [PF12681] Glyoxalase-like domain3.460.7445
3 Mapoly0122s0047 [PTHR18829:SF0] SUBFAMILY NOT NAMED; [PTHR18829] FAMILY NOT NAMED; [PF09811] Essential protein Yae1, N terminal5.290.7564
4 Mapoly0014s0074 [GO:0003677] DNA binding; [K10886] DNA-repair protein XRCC4; [GO:0006302] double-strand break repair; [GO:0005634] nucleus; [PF06632] DNA double-strand break repair and V(D)J recombination protein XRCC4; [GO:0006310] DNA recombination9.170.7396
5 Mapoly0069s0031 [PTHR13073] GCN5-RELATED; [PTHR13073:SF0] SUBFAMILY NOT NAMED; [KOG3390] General control of amino-acid synthesis 5-like 1; [PF06320] GCN5-like protein 1 (GCN5L1)10.910.7324
6 Mapoly0005s0063 [GO:0006406] mRNA export from nucleus; [GO:0000124] SAGA complex; [GO:0005643] nuclear pore; [GO:0045893] positive regulation of transcription, DNA-dependent; [PF10163] Transcription factor e(y)2; [KOG4479] Transcription factor e(y)2; [K11368] enhancer of yellow 2 transcription factor; [PTHR12514:SF1] ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR; [GO:0003713] transcription coactivator activity; [PTHR12514] ENHANCER OF YELLOW 2 TRANSCRIPTION FACTOR11.960.7170
7 Mapoly0014s0214 [K03457] nucleobase:cation symporter-1, NCS1 family; [PF09350] Domain of unknown function (DUF1992); [PTHR24016] FAMILY NOT NAMED14.700.7023
8 Mapoly0124s0029 [PF03966] Trm112p-like protein16.430.6712
9 Mapoly0002s0024 [PF05648] Peroxisomal biogenesis factor 11 (PEX11); [PTHR12652] PEROXISOMAL BIOGENESIS FACTOR 11; [KOG4186] Peroxisomal biogenesis protein (peroxin); [GO:0005779] integral to peroxisomal membrane; [GO:0016559] peroxisome fission17.660.7127
10 Mapoly0001s0494 [PF02991] Autophagy protein Atg8 ubiquitin like; [K08341] GABA(A) receptor-associated protein (autophagy-related protein 8); [PTHR10969] MICROTUBULE-ASSOCIATED PROTEINS 1A/1B LIGHT CHAIN 3-RELATED; [KOG1654] Microtubule-associated anchor protein involved in autophagy and membrane trafficking18.000.7183
11 Mapoly0007s0050 [KOG3245] Uncharacterized conserved protein; [PF07896] Protein of unknown function (DUF1674)22.360.6923
12 Mapoly0159s0011 [KOG3493] Ubiquitin-like protein; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR13042] FAMILY NOT NAMED; [K13113] ubiquitin-like protein 522.450.7110
13 Mapoly0052s0120 [K06664] peroxin-2; [PTHR12590:SF3] SUBFAMILY NOT NAMED; [KOG2879] Predicted E3 ubiquitin ligase; [PF04757] Pex2 / Pex12 amino terminal region; [PTHR12590] PEROXISOMAL PROTEIN RELATED22.980.7089
14 Mapoly0076s0083 [K00567] methylated-DNA-[protein]-cysteine S-methyltransferase [EC:2.1.1.63]; [PTHR10815] METHYLATED-DNA--PROTEIN-CYSTEINE METHYLTRANSFERASE; [GO:0006281] DNA repair; [PF01035] 6-O-methylguanine DNA methyltransferase, DNA binding domain; [GO:0003824] catalytic activity; [2.1.1.63] Methylated-DNA--[protein]-cysteine S-methyltransferase.23.240.6831
15 Mapoly0019s0110 -24.920.6952
16 Mapoly0114s0047 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain28.140.7141
17 Mapoly0072s0020 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED28.570.6938
18 Mapoly0108s0064 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE; [GO:0005515] protein binding; [PF00856] SET domain; [KOG1337] N-methyltransferase; [PF09273] Rubisco LSMT substrate-binding28.580.6999
19 Mapoly0130s0010 [GO:0016020] membrane; [GO:0030001] metal ion transport; [PF01544] CorA-like Mg2+ transporter protein; [GO:0055085] transmembrane transport; [GO:0046873] metal ion transmembrane transporter activity; [PTHR21535] MAGNESIUM AND COBALT TRANSPORT PROTEIN/MITOCHONDRIAL IMPORT INNER MEMBRANE TRANSLOCASE SUBUNIT TIM829.480.6460
20 Mapoly0083s0036 [PF15054] Domain of unknown function (DUF4535)29.500.7378
21 Mapoly0124s0031 [PTHR24413] FAMILY NOT NAMED; [PF00651] BTB/POZ domain; [GO:0005515] protein binding29.800.7209
22 Mapoly0033s0144 [PTHR31354] FAMILY NOT NAMED30.580.7083
23 Mapoly0149s0010 -31.060.7393
24 Mapoly0006s0236 [GO:0015035] protein disulfide oxidoreductase activity; [2.5.1.18] Glutathione transferase.; [PTHR13887] GLUTATHIONE S-TRANSFERASE KAPPA; [PF01323] DSBA-like thioredoxin domain; [K13299] glutathione S-transferase kappa 1 [EC:2.5.1.18]36.060.6531
25 Mapoly0134s0031 -39.950.6427
26 Mapoly0825s0001 -40.250.6625
27 Mapoly0032s0047 [PTHR11614] PHOSPHOLIPASE-RELATED; [KOG1455] Lysophospholipase; [PF12695] Alpha/beta hydrolase family40.690.6694
28 Mapoly0052s0018 [PF01940] Integral membrane protein DUF92; [GO:0016021] integral to membrane; [PTHR13353] FAMILY NOT NAMED; [KOG4491] Predicted membrane protein40.820.6262
29 Mapoly0058s0027 [PF03878] YIF1; [KOG3094] Predicted membrane protein; [PTHR14083] YIP1 INTERACTING FACTOR HOMOLOG (YIF1 PROTEIN)40.990.6975
30 Mapoly0031s0179 [GO:0000166] nucleotide binding; [PF00702] haloacid dehalogenase-like hydrolase; [PTHR24093] FAMILY NOT NAMED; [PF00690] Cation transporter/ATPase, N-terminus; [PF00689] Cation transporting ATPase, C-terminus; [GO:0046872] metal ion binding; [PF00122] E1-E2 ATPase; [KOG0202] Ca2+ transporting ATPase46.010.6494
31 Mapoly0063s0075 [GO:0005524] ATP binding; [PF02772] S-adenosylmethionine synthetase, central domain; [PF02773] S-adenosylmethionine synthetase, C-terminal domain; [GO:0004478] methionine adenosyltransferase activity; [KOG1506] S-adenosylmethionine synthetase; [PF00438] S-adenosylmethionine synthetase, N-terminal domain; [PTHR11964] S-ADENOSYLMETHIONINE SYNTHETASE; [GO:0006556] S-adenosylmethionine biosynthetic process46.500.6690
32 Mapoly0021s0148 [PF04970] Lecithin retinol acyltransferase; [PTHR13943] HRAS-LIKE SUPPRESSOR - RELATED49.190.7174
33 Mapoly0071s0091 [PTHR20835] FAMILY NOT NAMED; [KOG4102] Uncharacterized conserved protein; [PF07491] Protein phosphatase inhibitor50.890.6753
34 Mapoly0047s0020 [PF03226] Yippee zinc-binding/DNA-binding /Mis18, centromere assembly; [PTHR13847] FAD NAD BINDING OXIDOREDUCTASES; [KOG3399] Predicted Yippee-type zinc-binding protein51.030.6727
35 Mapoly0075s0062 [PTHR31435] FAMILY NOT NAMED; [PF14542] GCN5-related N-acetyl-transferase51.220.6716
36 Mapoly0016s0028 [K13118] protein DGCR14; [KOG2627] Nuclear protein ES2; [PTHR12940] ES-2 PROTEIN - RELATED; [PF09751] Nuclear protein Es252.650.6963
37 Mapoly0009s0090 [PTHR31509] FAMILY NOT NAMED52.920.6894
38 Mapoly0086s0013 [PTHR22911] ACYL-MALONYL CONDENSING ENZYME-RELATED; [KOG1441] Glucose-6-phosphate/phosphate and phosphoenolpyruvate/phosphate antiporter53.310.5303
39 Mapoly0068s0058 [GO:0005840] ribosome; [GO:0003735] structural constituent of ribosome; [GO:0005622] intracellular; [PF01280] Ribosomal protein L19e; [GO:0006412] translation; [PTHR10722] 60S RIBOSOMAL PROTEIN L19; [K02885] large subunit ribosomal protein L19e; [KOG1696] 60s ribosomal protein L1953.920.6080
40 Mapoly0003s0025 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity54.080.6492
41 Mapoly0037s0106 [PTHR10030] ALPHA-L-FUCOSIDASE; [PF00754] F5/8 type C domain; [GO:0004560] alpha-L-fucosidase activity; [PF01120] Alpha-L-fucosidase; [GO:0005975] carbohydrate metabolic process; [GO:0007155] cell adhesion54.990.6771
42 Mapoly0004s0244 -55.480.6915
43 Mapoly0016s0097 -55.720.6509
44 Mapoly0045s0146 [KOG3591] Alpha crystallins; [PTHR11527] SMALL HEAT-SHOCK PROTEIN (HSP20) FAMILY; [PF00011] Hsp20/alpha crystallin family56.320.6584
45 Mapoly0103s0047 [KOG0427] Ubiquitin conjugating enzyme; [PTHR24067] UBIQUITIN-CONJUGATING ENZYME E2; [GO:0016881] acid-amino acid ligase activity; [6.3.2.19] Ubiquitin--protein ligase.; [PTHR24067:SF35] UBIQUITIN-CONJUGATING ENZYME E2 W; [K10688] ubiquitin-conjugating enzyme E2 W [EC:6.3.2.19]; [PF00179] Ubiquitin-conjugating enzyme56.850.6819
46 Mapoly0090s0037 [PTHR15561:SF0] SUBFAMILY NOT NAMED; [KOG4168] Predicted RNA polymerase III subunit C17; [PTHR15561] CALCITONIN GENE-RELATED PEPTIDE-RECEPTOR COMPONENT PROTEIN; [PF03874] RNA polymerase Rpb4; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity56.920.6449
47 Mapoly0119s0002 [PF02987] Late embryogenesis abundant protein; [PTHR23241] LATE EMBRYOGENESIS ABUNDANT (PLANTS) LEA-RELATED; [PTHR23241:SF11] LATE EMBRYOGENESIS ABUNDANT (LEA)58.020.6817
48 Mapoly0006s0234 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3949] RNA polymerase II elongator complex, subunit ELP4; [PTHR12896:SF1] gb def: elongator protein 4, 50kd subunit, elp4p [saccharomyces cerevisiae]; [PTHR12896] PAX6 NEIGHBOR PROTEIN (PAXNEB); [PF05625] PAXNEB protein; [GO:0033588] Elongator holoenzyme complex; [K11375] elongator complex protein 459.900.6632
49 Mapoly0064s0010 -63.910.6343
50 Mapoly0008s0002 [PF05755] Rubber elongation factor protein (REF)63.990.7089
Showing 1 to 50 of 200 records
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