Guide Gene

Gene ID
Mapoly0003s0025
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[GO:0006396] RNA processing; [GO:0003723] RNA binding; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0003s0025 [GO:0006396] RNA processing; [GO:0003723] RNA binding; [PF00636] Ribonuclease III domain; [GO:0004525] ribonuclease III activity 0.00 1.0000
1 Mapoly0136s0033 -4.000.7494
2 Mapoly0021s0048 [KOG4539] Uncharacterized conserved protein; [PF10173] Mitochondrial K+-H+ exchange-related4.580.7223
3 Mapoly0110s0009 -9.700.6158
4 Mapoly0123s0005 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase13.640.7386
5 Mapoly0036s0061 [PTHR31960] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF14299] Phloem protein 2; [PF00646] F-box domain14.490.6796
6 Mapoly0095s0065 [PTHR31642] FAMILY NOT NAMED; [GO:0016747] transferase activity, transferring acyl groups other than amino-acyl groups; [PF02458] Transferase family14.830.7050
7 Mapoly0141s0022 [PTHR30502] 2-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE; [PF03328] HpcH/HpaI aldolase/citrate lyase family; [GO:0003824] catalytic activity; [PTHR30502:SF0] 2-KETO-3-DEOXY-L-RHAMNONATE ALDOLASE21.210.6976
8 Mapoly0101s0063 [GO:0003677] DNA binding; [KOG2906] RNA polymerase III subunit C11; [GO:0008270] zinc ion binding; [PF02150] RNA polymerases M/15 Kd subunit; [GO:0006351] transcription, DNA-dependent; [GO:0003676] nucleic acid binding; [GO:0003899] DNA-directed RNA polymerase activity; [PTHR11239] DNA-DIRECTED RNA POLYMERASE; [2.7.7.6] DNA-directed RNA polymerase.; [K03019] DNA-directed RNA polymerase III subunit RPC10; [PF01096] Transcription factor S-II (TFIIS)21.820.6639
9 Mapoly0027s0128 [GO:0006260] DNA replication; [PTHR10302] SINGLE-STRANDED DNA-BINDING PROTEIN; [GO:0003697] single-stranded DNA binding; [PTHR10302:SF0] SINGLE-STRANDED DNA-BINDING PROTEIN; [PF00436] Single-strand binding protein family23.020.6962
10 Mapoly0041s0050 -26.830.6721
11 Mapoly0149s0010 -34.290.7098
12 Mapoly0001s0204 [PF03798] TLC domain; [KOG1607] Protein transporter of the TRAM (translocating chain-associating membrane) superfamily; [PTHR12560:SF5] gb def: lagl protein [suberites domuncula]; [GO:0016021] integral to membrane; [PTHR12560] LONGEVITY ASSURANCE FACTOR 1 (LAG1)34.900.6696
13 Mapoly0803s0001 [PF04970] Lecithin retinol acyltransferase; [PTHR13943] HRAS-LIKE SUPPRESSOR - RELATED35.620.5943
14 Mapoly0187s0002 [GO:0006396] RNA processing; [PF01137] RNA 3'-terminal phosphate cyclase; [PF05189] RNA 3'-terminal phosphate cyclase (RTC), insert domain; [KOG3980] RNA 3'-terminal phosphate cyclase; [PTHR11096:SF1] RNA 3-TERMINAL PHOSPHATE CYCLASE-RELATED; [PTHR11096] RNA 3' TERMINAL PHOSPHATE CYCLASE; [K11108] RNA 3'-terminal phosphate cyclase-like protein36.220.7042
15 Mapoly0170s0007 -38.990.6735
16 Mapoly0140s0002 -40.100.7050
17 Mapoly0083s0036 [PF15054] Domain of unknown function (DUF4535)41.070.7048
18 Mapoly0089s0045 [KOG3350] Uncharacterized conserved protein; [PF10237] Probable N6-adenine methyltransferase41.710.6850
19 Mapoly0069s0031 [PTHR13073] GCN5-RELATED; [PTHR13073:SF0] SUBFAMILY NOT NAMED; [KOG3390] General control of amino-acid synthesis 5-like 1; [PF06320] GCN5-like protein 1 (GCN5L1)45.910.6600
20 Mapoly0034s0109 [GO:0006396] RNA processing; [KOG3833] Uncharacterized conserved protein, contains RtcB domain; [PTHR11118] UNCHARACTERIZED; [PF01139] tRNA-splicing ligase RtcB; [GO:0008452] RNA ligase activity50.840.6857
21 Mapoly0022s0133 [KOG2944] Glyoxalase; [PTHR10374:SF1] LACTOYLGLUTATHIONE LYASE; [PTHR10374] LACTOYLGLUTATHIONE LYASE (GLYOXALASE I); [PF12681] Glyoxalase-like domain52.480.6559
22 Mapoly0014s0078 [PF13445] RING-type zinc-finger; [PTHR13139] RING FINGER AND CCCH-TYPE ZINC FINGER DOMAIN-CONTAINING PROTEIN54.080.6492
23 Mapoly0003s0263 [GO:0003755] peptidyl-prolyl cis-trans isomerase activity; [PTHR11071] PEPTIDYL-PROLYL CIS-TRANS ISOMERASE; [PF00160] Cyclophilin type peptidyl-prolyl cis-trans isomerase/CLD; [GO:0000413] protein peptidyl-prolyl isomerization; [KOG0884] Similar to cyclophilin-type peptidyl-prolyl cis-trans isomerase; [GO:0006457] protein folding; [5.2.1.8] Peptidylprolyl isomerase.; [K12734] peptidyl-prolyl cis-trans isomerase-like 3 [EC:5.2.1.8]57.690.6784
24 Mapoly0132s0041 [K05752] chromosome 3 open reading frame 1059.460.5954
25 Mapoly0070s0059 [GO:0005507] copper ion binding; [PTHR21320] CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11-RELATED; [K02258] cytochrome c oxidase subunit XI assembly protein; [PF04442] Cytochrome c oxidase assembly protein CtaG/Cox11; [PTHR21320:SF0] CYTOCHROME C OXIDASE ASSEMBLY PROTEIN COX11, MITOCHONDRIAL62.830.6200
26 Mapoly0180s0030 [PF00190] Cupin; [GO:0045735] nutrient reservoir activity; [PTHR31238] FAMILY NOT NAMED67.650.6171
27 Mapoly0062s0062 [KOG2382] Predicted alpha/beta hydrolase; [PTHR10992] ALPHA/BETA HYDROLASE FOLD-CONTAINING PROTEIN; [PF12697] Alpha/beta hydrolase family69.170.6609
28 Mapoly0006s0234 [GO:0006357] regulation of transcription from RNA polymerase II promoter; [KOG3949] RNA polymerase II elongator complex, subunit ELP4; [PTHR12896:SF1] gb def: elongator protein 4, 50kd subunit, elp4p [saccharomyces cerevisiae]; [PTHR12896] PAX6 NEIGHBOR PROTEIN (PAXNEB); [PF05625] PAXNEB protein; [GO:0033588] Elongator holoenzyme complex; [K11375] elongator complex protein 469.630.6420
29 Mapoly0036s0068 [PTHR31960] FAMILY NOT NAMED; [PF14299] Phloem protein 270.150.5571
30 Mapoly0122s0047 [PTHR18829:SF0] SUBFAMILY NOT NAMED; [PTHR18829] FAMILY NOT NAMED; [PF09811] Essential protein Yae1, N terminal70.150.6532
31 Mapoly0128s0017 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase72.020.6824
32 Mapoly0044s0010 -72.830.5881
33 Mapoly0077s0036 -74.030.6641
34 Mapoly0132s0009 -77.640.6453
35 Mapoly0041s0011 -80.300.6649
36 Mapoly0044s0101 [KOG1296] Uncharacterized conserved protein; [PF05907] Eukaryotic protein of unknown function (DUF866); [PTHR12857] UNCHARACTERIZED; [PTHR12857:SF0] SUBFAMILY NOT NAMED84.400.6396
37 Mapoly0141s0032 [GO:0003723] RNA binding; [PF01985] CRS1 / YhbY (CRM) domain; [PTHR31846] FAMILY NOT NAMED84.470.6594
38 Mapoly0001s0181 [PTHR10784] EUKARYOTIC TRANSLATION INITIATION FACTOR 6; [PTHR10784:SF0] EUKARYOTIC TRANSLATION INITIATION FACTOR 6; [K03264] translation initiation factor eIF-6; [GO:0042256] mature ribosome assembly; [GO:0043022] ribosome binding; [KOG3185] Translation initiation factor 6 (eIF-6); [PF01912] eIF-6 family85.730.6792
39 Mapoly0066s0028 [PTHR32133] FAMILY NOT NAMED; [GO:0005515] protein binding; [PF00646] F-box domain86.360.6584
40 Mapoly0009s0208 [K01265] methionyl aminopeptidase [EC:3.4.11.18]; [PTHR10804:SF9] METHIONINE AMINOPEPTIDASE 2; [GO:0008235] metalloexopeptidase activity; [3.4.11.18] Methionyl aminopeptidase.; [KOG2775] Metallopeptidase; [GO:0004177] aminopeptidase activity; [PF00557] Metallopeptidase family M24; [GO:0006508] proteolysis; [PTHR10804] PROTEASE FAMILY M24 (METHIONYL AMINOPEPTIDASE, AMINOPEPTIDASE P)89.930.6659
41 Mapoly0023s0020 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [PF01255] Putative undecaprenyl diphosphate synthase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE; [K11778] cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-]; [PTHR10291:SF0] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE92.290.6739
42 Mapoly0043s0125 [PF13855] Leucine rich repeat; [PF13516] Leucine Rich repeat; [GO:0005515] protein binding; [PF00240] Ubiquitin family; [PTHR23155] LEUCINE-RICH REPEAT-CONTAINING PROTEIN93.340.6684
43 Mapoly0072s0020 [PF00226] DnaJ domain; [PTHR24077] FAMILY NOT NAMED94.920.6230
44 Mapoly0009s0017 -95.760.6548
45 Mapoly0041s0072 [PF03803] Scramblase; [PTHR23248] PHOSPHOLIPID SCRAMBLASE-RELATED95.920.6659
46 Mapoly0061s0139 [PTHR13420:SF0] SUBFAMILY NOT NAMED; [KOG3276] Uncharacterized conserved protein, contains YggU domain; [K09131] hypothetical protein; [PTHR13420] UNCHARACTERIZED; [PF02594] Uncharacterised ACR, YggU family COG187298.750.6391
47 Mapoly0170s0038 [PTHR10857] COPINE; [PF07002] Copine99.910.6429
48 Mapoly0122s0043 [PF02810] SEC-C motif102.000.6545
49 Mapoly0058s0072 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PF01018] GTP1/OBG; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding; [PTHR11702:SF21] GTP-BINDING PROTEIN102.520.6679
50 Mapoly0026s0073 [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF00415] Regulator of chromosome condensation (RCC1) repeat104.100.6736
Showing 1 to 50 of 200 records
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