Guide Gene

Gene ID
Mapoly0026s0073
Organism
Marchantia polymorpha
Platform ID
Mpo
Description
[PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF00415] Regulator of chromosome condensation (RCC1) repeat

Coexpressed Gene List

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Marchantia polymorpha
Rank Gene ID Description MR PCC
Guide Mapoly0026s0073 [PTHR22870] REGULATOR OF CHROMOSOME CONDENSATION; [PF00415] Regulator of chromosome condensation (RCC1) repeat 0.00 1.0000
1 Mapoly0003s0075 [PTHR13069] UNCHARACTERIZED; [PF13532] 2OG-Fe(II) oxygenase superfamily1.000.9153
2 Mapoly0128s0017 [GO:0003723] RNA binding; [GO:0001522] pseudouridine synthesis; [KOG1919] RNA pseudouridylate synthases; [GO:0009451] RNA modification; [PTHR10436] RNA PSEUDOURIDYLATE SYNTHASE FAMILY PROTEIN; [GO:0009982] pseudouridine synthase activity; [PF00849] RNA pseudouridylate synthase1.410.9133
3 Mapoly0060s0112 -2.830.9075
4 Mapoly0137s0034 [PF02676] Methyltransferase TYW3; [PTHR23245] UNCHARACTERIZED; [PF13415] Galactose oxidase, central domain; [KOG1227] Putative methyltransferase; [PF02475] Met-10+ like-protein; [GO:0016740] transferase activity3.000.9128
5 Mapoly0001s0536 [PTHR24089] FAMILY NOT NAMED; [PF00153] Mitochondrial carrier protein; [KOG0770] Predicted mitochondrial carrier protein3.870.8937
6 Mapoly0029s0153 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [GO:0004659] prenyltransferase activity; [K02257] protoheme IX farnesyltransferase [EC:2.5.1.-]; [PTHR11048:SF3] PROTOHEME IX FARNESYLTRANSFERASE; [GO:0016021] integral to membrane; [PTHR11048] PRENYLTRANSFERASES; [PF01040] UbiA prenyltransferase family4.240.8866
7 Mapoly0149s0031 [GO:0005524] ATP binding; [PTHR24031:SF68] SUBFAMILY NOT NAMED; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [KOG0350] DEAD-box ATP-dependent RNA helicase6.000.8821
8 Mapoly0049s0129 [GO:0055114] oxidation-reduction process; [GO:0008270] zinc ion binding; [PF08240] Alcohol dehydrogenase GroES-like domain; [GO:0016491] oxidoreductase activity; [KOG1198] Zinc-binding oxidoreductase; [PF13602] Zinc-binding dehydrogenase; [PTHR11695] ALCOHOL DEHYDROGENASE RELATED6.160.8453
9 Mapoly0058s0072 [PF01926] 50S ribosome-binding GTPase; [PTHR11702] DEVELOPMENTALLY REGULATED GTP-BINDING PROTEIN-RELATED; [PF01018] GTP1/OBG; [KOG1489] Predicted GTP-binding protein (ODN superfamily); [GO:0005525] GTP binding; [PTHR11702:SF21] GTP-BINDING PROTEIN6.630.8836
10 Mapoly0037s0055 [GO:0016758] transferase activity, transferring hexosyl groups; [K03848] alpha-1,3-glucosyltransferase [EC:2.4.1.-]; [KOG2575] Glucosyltransferase - Alg6p; [PTHR12413] DOLICHYL GLYCOSYLTRANSFERASE; [PF03155] ALG6, ALG8 glycosyltransferase family; [PTHR12413:SF1] DOLICHYL GLYCOSYLTRANSFERASE; [GO:0005789] endoplasmic reticulum membrane; [2.4.1.-] Hexosyltransferases.7.750.8754
11 Mapoly0007s0121 [PTHR21027] TRNA-SPLICING ENDONUCLEASE SUBUNIT SEN54; [PF12928] tRNA-splicing endonuclease subunit sen54 N-term8.940.8838
12 Mapoly0019s0108 [PF02033] Ribosome-binding factor A; [GO:0006364] rRNA processing8.940.8859
13 Mapoly0005s0033 [PTHR12695] GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2; [GO:0006289] nucleotide-excision repair; [PTHR12695:SF2] GENERAL TRANSCRIPTION FACTOR IIH SUBUNIT 2; [PF07975] TFIIH C1-like domain; [GO:0008270] zinc ion binding; [GO:0006281] DNA repair; [GO:0006351] transcription, DNA-dependent; [GO:0000439] core TFIIH complex; [KOG2807] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, subunit SSL1; [PF04056] Ssl1-like; [K03142] transcription initiation factor TFIIH subunit 210.390.8456
14 Mapoly0123s0005 [PTHR14614] HEPATOCELLULAR CARCINOMA-ASSOCIATED ANTIGEN; [PF10294] Putative methyltransferase10.680.8348
15 Mapoly0027s0025 [GO:0046983] protein dimerization activity; [PTHR11800:SF2] DNA-DIRECTED RNA POLYMERASE II SUBUNIT 3; [PF01000] RNA polymerase Rpb3/RpoA insert domain; [KOG1522] RNA polymerase II, subunit POLR2C/RPB3; [GO:0006351] transcription, DNA-dependent; [GO:0003899] DNA-directed RNA polymerase activity; [K03011] DNA-directed RNA polymerase II subunit RPB3; [PTHR11800] DNA-DIRECTED RNA POLYMERASE; [PF01193] RNA polymerase Rpb3/Rpb11 dimerisation domain10.910.8667
16 Mapoly0038s0094 -11.490.8490
17 Mapoly0025s0100 [PTHR13124] 39S RIBOSOMAL PROTEIN L46, MITOCHONDRIAL PRECURSOR-RELATED; [KOG4548] Mitochondrial ribosomal protein L17; [PF11788] 39S mitochondrial ribosomal protein L4611.830.8767
18 Mapoly0001s0181 [PTHR10784] EUKARYOTIC TRANSLATION INITIATION FACTOR 6; [PTHR10784:SF0] EUKARYOTIC TRANSLATION INITIATION FACTOR 6; [K03264] translation initiation factor eIF-6; [GO:0042256] mature ribosome assembly; [GO:0043022] ribosome binding; [KOG3185] Translation initiation factor 6 (eIF-6); [PF01912] eIF-6 family12.000.8845
19 Mapoly0024s0042 [PF12937] F-box-like; [GO:0005515] protein binding; [PTHR15537] FAMILY NOT NAMED; [PF13474] SnoaL-like domain12.120.8392
20 Mapoly0102s0014 [KOG2857] Predicted MYND Zn-finger protein/hormone receptor interactor; [PTHR13241] THYROID RECEPTOR INTERACTING PROTEIN 3; [PF04438] HIT zinc finger13.860.8586
21 Mapoly0113s0045 [PF04603] Ran-interacting Mog1 protein; [PTHR15837:SF0] SUBFAMILY NOT NAMED; [KOG3329] RAN guanine nucleotide release factor; [PTHR15837] FAMILY NOT NAMED14.730.8539
22 Mapoly0117s0021 [PF01535] PPR repeat; [PTHR24015] FAMILY NOT NAMED; [PF13041] PPR repeat family14.970.8864
23 Mapoly0041s0011 -15.680.8196
24 Mapoly0057s0052 [PF04032] RNAse P Rpr2/Rpp21/SNM1 subunit domain16.120.8577
25 Mapoly0004s0068 [KOG3015] F1-ATP synthase assembly protein; [PF07542] ATP12 chaperone protein; [K07556] ATP synthase mitochondrial F1 complex assembly factor 2; [PTHR21013] ATP SYNTHASE MITOCHONDRIAL F1 COMPLEX ASSEMBLY FACTOR 2/ATP12 PROTEIN, MITOCHONDRIAL PRECURSOR; [GO:0043461] proton-transporting ATP synthase complex assembly16.430.8363
26 Mapoly0002s0128 [GO:0016020] membrane; [PF00344] SecY translocase; [GO:0015031] protein transport; [PTHR10906] SECY/SEC61-ALPHA FAMILY MEMBER16.910.8626
27 Mapoly0012s0148 -17.830.8365
28 Mapoly0082s0085 [GO:0005515] protein binding; [PTHR19848:SF0] SUBFAMILY NOT NAMED; [PTHR19848] WD40 REPEAT PROTEIN; [PF08154] NLE (NUC135) domain; [KOG0271] Notchless-like WD40 repeat-containing protein; [PF00400] WD domain, G-beta repeat17.890.8630
29 Mapoly0128s0010 [PTHR12749:SF0] SUBFAMILY NOT NAMED; [PTHR12749] EXCISION REPAIR CROSS-COMPLEMENTING 1 ERCC1; [PF14520] Helix-hairpin-helix domain; [PF03834] Binding domain of DNA repair protein Ercc1 (rad10/Swi10); [GO:0005634] nucleus; [GO:0006281] DNA repair; [GO:0003684] damaged DNA binding; [K10849] DNA excision repair protein ERCC-1; [KOG2841] Structure-specific endonuclease ERCC1-XPF, ERCC1 component; [GO:0004519] endonuclease activity18.650.8553
30 Mapoly0099s0058 -18.970.8644
31 Mapoly0122s0043 [PF02810] SEC-C motif20.120.8197
32 Mapoly0057s0009 -20.830.8301
33 Mapoly0097s0077 [PTHR12888:SF0] SUBFAMILY NOT NAMED; [K13345] peroxin-12; [GO:0008270] zinc ion binding; [GO:0006625] protein targeting to peroxisome; [PF04757] Pex2 / Pex12 amino terminal region; [PF13923] Zinc finger, C3HC4 type (RING finger); [PTHR12888] PEROXISOME ASSEMBLY PROTEIN 12 (PEROXIN-12); [GO:0005779] integral to peroxisomal membrane; [GO:0008022] protein C-terminus binding; [KOG0826] Predicted E3 ubiquitin ligase involved in peroxisome organization20.900.8602
34 Mapoly0035s0119 -21.260.8035
35 Mapoly0187s0002 [GO:0006396] RNA processing; [PF01137] RNA 3'-terminal phosphate cyclase; [PF05189] RNA 3'-terminal phosphate cyclase (RTC), insert domain; [KOG3980] RNA 3'-terminal phosphate cyclase; [PTHR11096:SF1] RNA 3-TERMINAL PHOSPHATE CYCLASE-RELATED; [PTHR11096] RNA 3' TERMINAL PHOSPHATE CYCLASE; [K11108] RNA 3'-terminal phosphate cyclase-like protein21.660.8266
36 Mapoly0014s0118 -22.800.8377
37 Mapoly0039s0104 [GO:0006396] RNA processing; [3.1.26.5] Ribonuclease P.; [GO:0004526] ribonuclease P activity; [PF06978] Ribonucleases P/MRP protein subunit POP1; [K01164] ribonuclease P/MRP protein subunit POP1 [EC:3.1.26.5]; [GO:0001682] tRNA 5'-leader removal; [PTHR22731] RIBONUCLEASE P/MRP SUBUNIT; [PF08170] POPLD (NUC188) domain22.800.8780
38 Mapoly0023s0020 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [PF01255] Putative undecaprenyl diphosphate synthase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE; [K11778] cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-]; [PTHR10291:SF0] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE22.910.8464
39 Mapoly0149s0010 -22.980.8438
40 Mapoly0047s0046 [KOG2740] Clathrin-associated protein medium chain; [GO:0016192] vesicle-mediated transport; [K12398] AP-3 complex subunit mu; [GO:0005515] protein binding; [PTHR11998] CLATHRIN COAT ASSEMBLY PROTEIN; [PF00928] Adaptor complexes medium subunit family; [GO:0030131] clathrin adaptor complex; [GO:0006886] intracellular protein transport; [PTHR11998:SF4] CLATHRIN COAT ADAPTOR AP3 MEDIUM CHAIN23.450.8584
41 Mapoly0096s0064 [GO:0005524] ATP binding; [PTHR24220] FAMILY NOT NAMED; [GO:0016887] ATPase activity; [PF00005] ABC transporter24.490.8217
42 Mapoly0029s0109 [GO:0003723] RNA binding; [PF01926] 50S ribosome-binding GTPase; [KOG1423] Ras-like GTPase ERA; [PTHR11649] MSS1/TRME-RELATED GTP-BINDING PROTEIN; [PF07650] KH domain; [GO:0005525] GTP binding24.980.8706
43 Mapoly0059s0089 [GO:0003677] DNA binding; [GO:0005524] ATP binding; [PTHR11472:SF1] DNA REPAIR HELICASE RAD3/XP-D; [KOG1131] RNA polymerase II transcription initiation/nucleotide excision repair factor TFIIH, 5'-3' helicase subunit RAD3; [PF06777] Protein of unknown function (DUF1227); [GO:0008026] ATP-dependent helicase activity; [K10844] DNA excision repair protein ERCC-2 [EC:3.6.4.12]; [GO:0016787] hydrolase activity; [PF04851] Type III restriction enzyme, res subunit; [PF13307] Helicase C-terminal domain; [3.6.4.12] DNA helicase.; [PF06733] DEAD_2; [GO:0005634] nucleus; [PTHR11472] DNA REPAIR DEAD HELICASE RAD3/XP-D SUBFAMILY MEMBER; [GO:0006139] nucleobase-containing compound metabolic process; [GO:0003676] nucleic acid binding; [GO:0004003] ATP-dependent DNA helicase activity; [GO:0016818] hydrolase activity, acting on acid anhydrides, in phosphorus-containing anhydrides25.300.8513
44 Mapoly0051s0044 -26.150.8034
45 Mapoly0138s0041 [PTHR30602] AMINO-ACID ACETYLTRANSFERASE; [2.3.1.1] Amino-acid N-acetyltransferase.; [K14682] amino-acid N-acetyltransferase [EC:2.3.1.1]; [GO:0008080] N-acetyltransferase activity; [PF00583] Acetyltransferase (GNAT) family; [PF00696] Amino acid kinase family; [KOG2436] Acetylglutamate kinase/acetylglutamate synthase26.320.8628
46 Mapoly0012s0016 [2.5.1.-] Transferring alkyl or aryl groups, other than methyl groups.; [PF01255] Putative undecaprenyl diphosphate synthase; [KOG1602] Cis-prenyltransferase; [GO:0016765] transferase activity, transferring alkyl or aryl (other than methyl) groups; [PTHR10291] DEHYDRODOLICHYL DIPHOSPHATE SYNTHASE; [K11778] cis-prenyltransferase, dehydrodolichyl diphosphate synthase [EC:2.5.1.-]26.380.8033
47 Mapoly0164s0014 [KOG0341] DEAD-box protein abstrakt; [GO:0005524] ATP binding; [K13116] ATP-dependent RNA helicase DDX41 [EC:3.6.4.13]; [3.6.4.13] RNA helicase.; [PF00270] DEAD/DEAH box helicase; [PF00271] Helicase conserved C-terminal domain; [PTHR24031] FAMILY NOT NAMED; [GO:0003676] nucleic acid binding; [PTHR24031:SF20] SUBFAMILY NOT NAMED27.220.8639
48 Mapoly0010s0148 [PTHR13271] UNCHARACTERIZED PUTATIVE METHYLTRANSFERASE27.980.8574
49 Mapoly0167s0023 [GO:0000287] magnesium ion binding; [K10761] tRNA(His) guanylyltransferase [EC:2.7.7.-]; [PTHR12729:SF1] UNCHARACTERIZED; [PF04446] tRNAHis guanylyltransferase; [GO:0008193] tRNA guanylyltransferase activity; [PF14413] Thg1 C terminal domain; [2.7.7.-] Nucleotidyltransferases.; [PTHR12729] UNCHARACTERIZED; [GO:0006400] tRNA modification; [KOG2721] Uncharacterized conserved protein28.270.8413
50 Mapoly0163s0003 [PTHR32133] FAMILY NOT NAMED29.390.7942
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